RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 COPS9Q8WXC6 57 aa11.97□□□□□ -0.49
LIMS2-208ENST00000410011 CITED1Q99966 193 aa11.97□□□□□ -0.49
LIMS2-208ENST00000410011 H7C423 109 aa11.97□□□□□ -0.49
LIMS2-208ENST00000410011 RPL36AP83881 106 aaKnown RBP11.97□□□□□ -0.49
LIMS2-208ENST00000410011 KHDC1LQ5JSQ8 128 aa11.97□□□□□ -0.49
LIMS2-208ENST00000410011 RPL36ALQ969Q0 106 aaKnown RBP11.97□□□□□ -0.49
LIMS2-208ENST00000410011 XCL2Q9UBD3 114 aa11.97□□□□□ -0.49
LIMS2-208ENST00000410011 ANKRD17O75179 2603 aaKnown RBP11.96□□□□□ -0.49
LIMS2-208ENST00000410011 PIEZO1Q92508 2521 aa11.96□□□□□ -0.49
LIMS2-208ENST00000410011 COX6A2Q02221 97 aa11.96□□□□□ -0.49
LIMS2-208ENST00000410011 C2orf82Q6UX34 121 aa11.95□□□□□ -0.5
LIMS2-208ENST00000410011 TEX29Q8N6K0 151 aa11.95□□□□□ -0.5
LIMS2-208ENST00000410011 UBE2WQ96B02 151 aa11.95□□□□□ -0.5
LIMS2-208ENST00000410011 TRAV4A0A0B4J268 109 aa11.94□□□□□ -0.5
LIMS2-208ENST00000410011 K7EQD1 137 aa11.94□□□□□ -0.5
LIMS2-208ENST00000410011 DEFB121Q5J5C9 76 aa11.94□□□□□ -0.5
LIMS2-208ENST00000410011 Q6ZSV7 163 aa11.94□□□□□ -0.5
LIMS2-208ENST00000410011 IGSF10Q6WRI0 2623 aa11.94□□□□□ -0.5
LIMS2-208ENST00000410011 TEX49A0A1B0GTD5 131 aa11.94□□□□□ -0.5
LIMS2-208ENST00000410011 LINC00308Q8TCZ7 52 aa11.94□□□□□ -0.5
LIMS2-208ENST00000410011 TRGV1A0A0A0MS02 117 aa11.93□□□□□ -0.5
LIMS2-208ENST00000410011 KRTAP10-9P60411 292 aa11.93□□□□□ -0.5
LIMS2-208ENST00000410011 CITED2Q99967 270 aaPredicted RBP11.93□□□□□ -0.5
LIMS2-208ENST00000410011 Q9H8V8 135 aa11.93□□□□□ -0.5
LIMS2-208ENST00000410011 SMIM1B2RUZ4 78 aa11.93□□□□□ -0.5
LIMS2-208ENST00000410011 CMC4P56277 68 aaPredicted RBP11.93□□□□□ -0.5
LIMS2-208ENST00000410011 LINC00694P0DN24 101 aa11.92□□□□□ -0.5
LIMS2-208ENST00000410011 NTM-AS1Q6ZSK4 140 aa11.92□□□□□ -0.5
LIMS2-208ENST00000410011 Q96MF0 132 aa11.92□□□□□ -0.5
LIMS2-208ENST00000410011 CDC42SE2Q9NRR3 84 aa11.92□□□□□ -0.5
LIMS2-208ENST00000410011 FBN2P35556 2912 aa11.92□□□□□ -0.5
LIMS2-208ENST00000410011 TRAV8-4A0A0B4J246 113 aa11.92□□□□□ -0.5
LIMS2-208ENST00000410011 NPC2P61916 151 aa11.92□□□□□ -0.5
LIMS2-208ENST00000410011 HERV-K104P63124 156 aa11.92□□□□□ -0.5
LIMS2-208ENST00000410011 Q6Q795 121 aa11.92□□□□□ -0.5
LIMS2-208ENST00000410011 MXRA5Q9NR99 2828 aa11.91□□□□□ -0.5
LIMS2-208ENST00000410011 CSMD2Q7Z408 3487 aa11.91□□□□□ -0.5
LIMS2-208ENST00000410011 ZNF625Q96I27 306 aaPredicted RBP11.91□□□□□ -0.5
LIMS2-208ENST00000410011 ZANQ9Y493 2812 aa11.91□□□□□ -0.5
LIMS2-208ENST00000410011 FAM240AA0A1B0GVK7 77 aa11.91□□□□□ -0.5
LIMS2-208ENST00000410011 MRPL23Q16540 153 aaKnown RBP11.91□□□□□ -0.5
LIMS2-208ENST00000410011 ACACBO00763 2458 aa11.9□□□□□ -0.5
LIMS2-208ENST00000410011 F5H768 121 aa11.9□□□□□ -0.5
LIMS2-208ENST00000410011 KRTAP1-3Q8IUG1 177 aa11.9□□□□□ -0.5
LIMS2-208ENST00000410011 CCL24O00175 119 aa11.89□□□□□ -0.51
LIMS2-208ENST00000410011 SNCGO76070 127 aa11.89□□□□□ -0.51
LIMS2-208ENST00000410011 SHISA2Q6UWI4 295 aa11.89□□□□□ -0.51
LIMS2-208ENST00000410011 Q6ZTI0 123 aa11.89□□□□□ -0.51
LIMS2-208ENST00000410011 DAND5Q8N907 189 aa11.89□□□□□ -0.51
LIMS2-208ENST00000410011 CLEC2BQ92478 149 aa11.89□□□□□ -0.51
LIMS2-208ENST00000410011 FAM110AQ9BQ89 295 aa11.89□□□□□ -0.51
LIMS2-208ENST00000410011 GAGE2BQ13066 116 aa11.87□□□□□ -0.51
LIMS2-208ENST00000410011 GAGE2EQ4V326 116 aa11.87□□□□□ -0.51
LIMS2-208ENST00000410011 GAGE2DQ9UEU5 116 aa11.87□□□□□ -0.51
LIMS2-208ENST00000410011 UTP20O75691 2785 aaKnown RBP11.87□□□□□ -0.51
LIMS2-208ENST00000410011 COX7A2LO14548 114 aa11.87□□□□□ -0.51
LIMS2-208ENST00000410011 MYO18BQ8IUG5 2567 aa11.87□□□□□ -0.51
LIMS2-208ENST00000410011 TRAV13-1A0A0B4J241 112 aa11.86□□□□□ -0.51
LIMS2-208ENST00000410011 TRAV26-1A0A087WT03 109 aa11.86□□□□□ -0.51
LIMS2-208ENST00000410011 DNAJC9-AS1A6NH13 148 aa11.86□□□□□ -0.51
LIMS2-208ENST00000410011 PRB1P04280 392 aa11.86□□□□□ -0.51
LIMS2-208ENST00000410011 PRIMA1Q86XR5 153 aa11.86□□□□□ -0.51
LIMS2-208ENST00000410011 C16orf74Q96GX8 76 aa11.86□□□□□ -0.51
LIMS2-208ENST00000410011 TMEM243Q9BU79 118 aa11.86□□□□□ -0.51
LIMS2-208ENST00000410011 TRBV6-4A0A1B0GX49 114 aa11.85□□□□□ -0.51
LIMS2-208ENST00000410011 NDUFA7O95182 113 aa11.85□□□□□ -0.51
LIMS2-208ENST00000410011 GIG44P09565 113 aaPredicted RBP11.85□□□□□ -0.51
LIMS2-208ENST00000410011 SOSTDC1Q6X4U4 206 aa11.85□□□□□ -0.51
LIMS2-208ENST00000410011 GAGE12JA6NER3 117 aa11.85□□□□□ -0.51
LIMS2-208ENST00000410011 GAGE4Q13068 117 aa11.85□□□□□ -0.51
LIMS2-208ENST00000410011 GAGE5Q13069 117 aa11.85□□□□□ -0.51
LIMS2-208ENST00000410011 PLAC8L1A1L4L8 177 aa11.84□□□□□ -0.51
LIMS2-208ENST00000410011 OVOL2Q9BRP0 275 aa11.84□□□□□ -0.51
LIMS2-208ENST00000410011 ANAPC13Q9BS18 74 aa11.84□□□□□ -0.51
LIMS2-208ENST00000410011 POLQO75417 2590 aa11.84□□□□□ -0.51
LIMS2-208ENST00000410011 CRLF1O75462 422 aa11.83□□□□□ -0.51
LIMS2-208ENST00000410011 PF4P02776 101 aa11.83□□□□□ -0.51
LIMS2-208ENST00000410011 NOP10Q9NPE3 64 aaKnown RBP11.83□□□□□ -0.51
LIMS2-208ENST00000410011 MEIG1Q5JSS6 88 aa11.83□□□□□ -0.52
LIMS2-208ENST00000410011 ZNF843Q8N446 348 aa11.83□□□□□ -0.52
LIMS2-208ENST00000410011 BBC3Q96PG8 261 aaPredicted RBP11.83□□□□□ -0.52
LIMS2-208ENST00000410011 UBE2L6O14933 153 aa11.82□□□□□ -0.52
LIMS2-208ENST00000410011 TRACP01848 142 aa11.82□□□□□ -0.52
LIMS2-208ENST00000410011 HIST2H2BDQ6DRA6 164 aa11.82□□□□□ -0.52
LIMS2-208ENST00000410011 C15orf53Q8NAA6 179 aa11.82□□□□□ -0.52
LIMS2-208ENST00000410011 PTPN13Q12923 2485 aa11.82□□□□□ -0.52
LIMS2-208ENST00000410011 NAV2Q8IVL1 2488 aa11.81□□□□□ -0.52
LIMS2-208ENST00000410011 FAM208BQ5VWN6 2430 aa11.81□□□□□ -0.52
LIMS2-208ENST00000410011 ACYP1P07311 99 aa11.81□□□□□ -0.52
LIMS2-208ENST00000410011 C16orf95Q9H693 158 aa11.81□□□□□ -0.52
LIMS2-208ENST00000410011 TEX15Q9BXT5 2789 aa11.8□□□□□ -0.52
LIMS2-208ENST00000410011 NDUFV3P56181 108 aaKnown RBP11.8□□□□□ -0.52
LIMS2-208ENST00000410011 FAM222AQ5U5X8 452 aa11.8□□□□□ -0.52
LIMS2-208ENST00000410011 MYO9AB2RTY4 2548 aa11.8□□□□□ -0.52
LIMS2-208ENST00000410011 A0A1W2PRX2 142 aa11.8□□□□□ -0.52
LIMS2-208ENST00000410011 NHLRC4P0CG21 123 aaPredicted RBP11.8□□□□□ -0.52
LIMS2-208ENST00000410011 CSNK1G2-AS1Q8NCQ2 148 aa11.8□□□□□ -0.52
LIMS2-208ENST00000410011 ESM1Q9NQ30 184 aa11.8□□□□□ -0.52
LIMS2-208ENST00000410011 C19orf73Q9NVV2 129 aa11.8□□□□□ -0.52
LIMS2-208ENST00000410011 TRAV13-2A0A0B4J235 113 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms