RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 C1orf137Q5JT78 98 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 BRD3OSQ6XYD6 125 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 ZNF833PQ6ZTB9 187 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 ARL17AQ8IVW1 177 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 KCNRGQ8N5I3 272 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 Q8TAT8 98 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 ZNF431Q8TF32 576 aaPredicted RBP2.46□□□□□ -2.02
LSM5-206ENST00000409987 C4orf3Q8WVX3 66 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 SMIM7Q9BQ49 75 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 TXNDC17Q9BRA2 123 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 PSMG3Q9BT73 122 aaPredicted RBP2.46□□□□□ -2.02
LSM5-206ENST00000409987 SCN3BQ9NY72 215 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 CCDC88CQ9P219 2028 aa2.46□□□□□ -2.02
LSM5-206ENST00000409987 PDCD11Q14690 1871 aaKnown RBP2.45□□□□□ -2.02
LSM5-206ENST00000409987 EPPK1P58107 5090 aaKnown RBP2.45□□□□□ -2.02
LSM5-206ENST00000409987 KIAA2026Q5HYC2 2103 aa2.45□□□□□ -2.02
LSM5-206ENST00000409987 CNBPP62633 177 aaKnown RBP2.45□□□□□ -2.02
LSM5-206ENST00000409987 LINC01545Q5VT33 79 aa2.45□□□□□ -2.02
LSM5-206ENST00000409987 KRTAP26-1Q6PEX3 210 aa2.45□□□□□ -2.02
LSM5-206ENST00000409987 CASC2Q6XLA1 102 aa2.45□□□□□ -2.02
LSM5-206ENST00000409987 ATP11AUNQ6ZP68 121 aa2.45□□□□□ -2.02
LSM5-206ENST00000409987 ATP6V0E2Q8NHE4 81 aa2.45□□□□□ -2.02
LSM5-206ENST00000409987 PP6455Q8WZ26 134 aa2.45□□□□□ -2.02
LSM5-206ENST00000409987 C14orf144Q96I85 54 aa2.45□□□□□ -2.02
LSM5-206ENST00000409987 SNRNP25Q9BV90 132 aaKnown RBP2.45□□□□□ -2.02
LSM5-206ENST00000409987 PRKDCP78527 4128 aaKnown RBP2.45□□□□□ -2.02
LSM5-206ENST00000409987 MYLKQ15746 1914 aa2.44□□□□□ -2.02
LSM5-206ENST00000409987 POLEQ07864 2286 aa2.44□□□□□ -2.02
LSM5-206ENST00000409987 TRAV12-2A0A075B6T6 113 aa2.44□□□□□ -2.02
LSM5-206ENST00000409987 EDF1O60869 148 aaKnown RBP2.44□□□□□ -2.02
LSM5-206ENST00000409987 HYPMO75409 117 aa2.44□□□□□ -2.02
LSM5-206ENST00000409987 BTG2P78543 158 aa2.44□□□□□ -2.02
LSM5-206ENST00000409987 MIR22HGQ0VDD5 57 aa2.44□□□□□ -2.02
LSM5-206ENST00000409987 FOXI2Q6ZQN5 318 aa2.44□□□□□ -2.02
LSM5-206ENST00000409987 Q6ZUT4 128 aa2.44□□□□□ -2.02
LSM5-206ENST00000409987 RERGLQ9H628 205 aa2.44□□□□□ -2.02
LSM5-206ENST00000409987 TRRAPQ9Y4A5 3859 aa2.44□□□□□ -2.02
LSM5-206ENST00000409987 ZANQ9Y493 2812 aa2.44□□□□□ -2.02
LSM5-206ENST00000409987 PKDREJQ9NTG1 2253 aa2.43□□□□□ -2.02
LSM5-206ENST00000409987 CEP192Q8TEP8 1941 aa2.42□□□□□ -2.02
LSM5-206ENST00000409987 C20orf202A1L168 122 aa2.42□□□□□ -2.02
LSM5-206ENST00000409987 PITX3O75364 302 aa2.42□□□□□ -2.02
LSM5-206ENST00000409987 SMIM6P0DI80 62 aa2.42□□□□□ -2.02
LSM5-206ENST00000409987 MIC13Q5XKP0 118 aa2.42□□□□□ -2.02
LSM5-206ENST00000409987 ZCCHC23Q6ZST2 131 aa2.42□□□□□ -2.02
LSM5-206ENST00000409987 FP248Q71RG6 208 aaPredicted RBP2.42□□□□□ -2.02
LSM5-206ENST00000409987 GKN2Q86XP6 184 aa2.42□□□□□ -2.02
LSM5-206ENST00000409987 SNX29P2Q8IUI4 249 aa2.42□□□□□ -2.02
LSM5-206ENST00000409987 COPS9Q8WXC6 57 aa2.42□□□□□ -2.02
LSM5-206ENST00000409987 NOP16Q9Y3C1 178 aaKnown RBP2.42□□□□□ -2.02
LSM5-206ENST00000409987 MGAM2Q2M2H8 2515 aa2.42□□□□□ -2.02
LSM5-206ENST00000409987 ABCA4P78363 2273 aa2.42□□□□□ -2.02
LSM5-206ENST00000409987 MYO18AQ92614 2054 aaKnown RBP2.41□□□□□ -2.02
LSM5-206ENST00000409987 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.41□□□□□ -2.02
LSM5-206ENST00000409987 RBP2P50120 134 aa2.41□□□□□ -2.02
LSM5-206ENST00000409987 KRTAP10-1P60331 282 aa2.41□□□□□ -2.02
LSM5-206ENST00000409987 OR10AG1Q8NH19 301 aa2.41□□□□□ -2.02
LSM5-206ENST00000409987 PPP3R2Q96LZ3 170 aa2.41□□□□□ -2.02
LSM5-206ENST00000409987 COA4Q9NYJ1 87 aa2.41□□□□□ -2.02
LSM5-206ENST00000409987 BOKQ9UMX3 212 aaPredicted RBP2.41□□□□□ -2.02
LSM5-206ENST00000409987 ZFC3H1O60293 1989 aaKnown RBP2.41□□□□□ -2.02
LSM5-206ENST00000409987 PCLOQ9Y6V0 5065 aa2.4□□□□□ -2.02
LSM5-206ENST00000409987 KIAA1549LQ6ZVL6 1849 aa2.4□□□□□ -2.02
LSM5-206ENST00000409987 TRBV6-8A0A0A6YYG3 113 aa2.4□□□□□ -2.03
LSM5-206ENST00000409987 C10orf142B7Z368 130 aa2.4□□□□□ -2.03
LSM5-206ENST00000409987 CCDC179H3BU77 68 aa2.4□□□□□ -2.03
LSM5-206ENST00000409987 J3QLW9 94 aa2.4□□□□□ -2.03
LSM5-206ENST00000409987 HMGA1P17096 107 aaKnown RBP2.4□□□□□ -2.03
LSM5-206ENST00000409987 GNG4P50150 75 aa2.4□□□□□ -2.03
LSM5-206ENST00000409987 TEX261Q6UWH6 196 aa2.4□□□□□ -2.03
LSM5-206ENST00000409987 AGPAT4-IT1Q9H0P7 198 aa2.4□□□□□ -2.03
LSM5-206ENST00000409987 DIDO1Q9BTC0 2240 aaKnown RBP2.4□□□□□ -2.03
LSM5-206ENST00000409987 ANAPC1Q9H1A4 1944 aa2.39□□□□□ -2.03
LSM5-206ENST00000409987 HYDINQ4G0P3 5121 aa2.39□□□□□ -2.03
LSM5-206ENST00000409987 SNAPC5O75971 98 aa2.39□□□□□ -2.03
LSM5-206ENST00000409987 HIST1H1DP16402 221 aaKnown RBP2.39□□□□□ -2.03
LSM5-206ENST00000409987 C10orf55Q5SWW7 151 aa2.39□□□□□ -2.03
LSM5-206ENST00000409987 COA5Q86WW8 74 aa2.39□□□□□ -2.03
LSM5-206ENST00000409987 C5orf17Q8NAS9 161 aa2.39□□□□□ -2.03
LSM5-206ENST00000409987 NAA60Q9H7X0 242 aa2.39□□□□□ -2.03
LSM5-206ENST00000409987 TAS2R8Q9NYW2 309 aa2.39□□□□□ -2.03
LSM5-206ENST00000409987 ORMDL1Q9P0S3 153 aa2.39□□□□□ -2.03
LSM5-206ENST00000409987 U3KQA8 63 aa2.39□□□□□ -2.03
LSM5-206ENST00000409987 NUMA1Q14980 2115 aa2.39□□□□□ -2.03
LSM5-206ENST00000409987 WNK1Q9H4A3 2382 aa2.38□□□□□ -2.03
LSM5-206ENST00000409987 HIVEP2P31629 2446 aa2.38□□□□□ -2.03
LSM5-206ENST00000409987 F8W1H4 67 aa2.38□□□□□ -2.03
LSM5-206ENST00000409987 COX7CP15954 63 aa2.38□□□□□ -2.03
LSM5-206ENST00000409987 SLC25A26Q70HW3 274 aa2.38□□□□□ -2.03
LSM5-206ENST00000409987 VSTM2AQ8TAG5 236 aa2.38□□□□□ -2.03
LSM5-206ENST00000409987 PATE1Q8WXA2 126 aa2.38□□□□□ -2.03
LSM5-206ENST00000409987 LINC00052Q96N35 136 aa2.38□□□□□ -2.03
LSM5-206ENST00000409987 SEC11CQ9BY50 192 aa2.38□□□□□ -2.03
LSM5-206ENST00000409987 ZFP30Q9Y2G7 519 aa2.38□□□□□ -2.03
LSM5-206ENST00000409987 TENM1Q9UKZ4 2725 aa2.38□□□□□ -2.03
LSM5-206ENST00000409987 SONP18583 2426 aaKnown RBP2.38□□□□□ -2.03
LSM5-206ENST00000409987 ANK1P16157 1881 aa2.37□□□□□ -2.03
LSM5-206ENST00000409987 MYH7P12883 1935 aa2.37□□□□□ -2.03
LSM5-206ENST00000409987 IGHV3-33P01772 117 aa2.37□□□□□ -2.03
LSM5-206ENST00000409987 RNASE3P12724 160 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms