RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 FOXI1Q12951 378 aa11.34□□□□□ -0.59
LSM5-204ENST00000409909 CDC42SE2Q9NRR3 84 aa11.34□□□□□ -0.59
LSM5-204ENST00000409909 AP5S1Q9NUS5 200 aa11.34□□□□□ -0.59
LSM5-204ENST00000409909 LINC00959A0A1B0GUT2 108 aa11.33□□□□□ -0.6
LSM5-204ENST00000409909 A0A1B0GW15 77 aa11.33□□□□□ -0.6
LSM5-204ENST00000409909 C7orf77A4D0Y5 90 aa11.33□□□□□ -0.6
LSM5-204ENST00000409909 PPP1R17O96001 155 aa11.33□□□□□ -0.6
LSM5-204ENST00000409909 CFAP161Q6P656 301 aa11.33□□□□□ -0.6
LSM5-204ENST00000409909 LRP1Q07954 4544 aaKnown RBP11.32□□□□□ -0.6
LSM5-204ENST00000409909 A0A1B0GXF2 115 aa11.32□□□□□ -0.6
LSM5-204ENST00000409909 FCER1GP30273 86 aa11.32□□□□□ -0.6
LSM5-204ENST00000409909 XCL1P47992 114 aa11.32□□□□□ -0.6
LSM5-204ENST00000409909 HIGD2BQ4VC39 106 aa11.32□□□□□ -0.6
LSM5-204ENST00000409909 MRPL54Q6P161 138 aaKnown RBP11.32□□□□□ -0.6
LSM5-204ENST00000409909 TRBV24-1A0A075B6N3 115 aa11.31□□□□□ -0.6
LSM5-204ENST00000409909 IGHV3-64A0A075B6Q5 118 aa11.31□□□□□ -0.6
LSM5-204ENST00000409909 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.31□□□□□ -0.6
LSM5-204ENST00000409909 LINC00862A6NCI5 91 aa11.31□□□□□ -0.6
LSM5-204ENST00000409909 CCL25O15444 150 aa11.31□□□□□ -0.6
LSM5-204ENST00000409909 CIRBPQ14011 172 aaKnown RBP11.31□□□□□ -0.6
LSM5-204ENST00000409909 ZNF664Q8N3J9 261 aa11.31□□□□□ -0.6
LSM5-204ENST00000409909 PPP1R2P9O14990 202 aa11.3□□□□□ -0.6
LSM5-204ENST00000409909 CKS2P33552 79 aa11.3□□□□□ -0.6
LSM5-204ENST00000409909 HBBP68871 147 aa11.3□□□□□ -0.6
LSM5-204ENST00000409909 KIR2DL4Q99706 377 aa11.3□□□□□ -0.6
LSM5-204ENST00000409909 C20orf78Q9BR46 151 aa11.3□□□□□ -0.6
LSM5-204ENST00000409909 GVQW2A0A096LPI5 108 aaPredicted RBP11.29□□□□□ -0.6
LSM5-204ENST00000409909 TNFRSF6BO95407 300 aa11.29□□□□□ -0.6
LSM5-204ENST00000409909 UBE2D4Q9Y2X8 147 aa11.29□□□□□ -0.6
LSM5-204ENST00000409909 PKHD1L1Q86WI1 4243 aa11.28□□□□□ -0.6
LSM5-204ENST00000409909 D6R8Y8 96 aa11.28□□□□□ -0.6
LSM5-204ENST00000409909 CHTF8P0CG12 524 aa11.28□□□□□ -0.6
LSM5-204ENST00000409909 RPL32P62910 135 aaKnown RBP11.28□□□□□ -0.6
LSM5-204ENST00000409909 CSDC2Q9Y534 153 aaKnown RBP11.28□□□□□ -0.6
LSM5-204ENST00000409909 F8W036 122 aa11.27□□□□□ -0.61
LSM5-204ENST00000409909 S100A8P05109 93 aa11.27□□□□□ -0.61
LSM5-204ENST00000409909 RAB14P61106 215 aa11.27□□□□□ -0.61
LSM5-204ENST00000409909 SS18Q15532 418 aa11.27□□□□□ -0.61
LSM5-204ENST00000409909 FAT3Q8TDW7 4589 aa11.27□□□□□ -0.61
LSM5-204ENST00000409909 NPYP01303 97 aa11.26□□□□□ -0.61
LSM5-204ENST00000409909 RPL37AP61513 92 aaKnown RBP11.26□□□□□ -0.61
LSM5-204ENST00000409909 RNASE13Q5GAN3 156 aaKnown RBP11.26□□□□□ -0.61
LSM5-204ENST00000409909 CD164L2Q6UWJ8 174 aa11.26□□□□□ -0.61
LSM5-204ENST00000409909 SPACA4Q8TDM5 124 aa11.26□□□□□ -0.61
LSM5-204ENST00000409909 COX6A2Q02221 97 aa11.25□□□□□ -0.61
LSM5-204ENST00000409909 PRSS3P2Q8NHM4 247 aa11.25□□□□□ -0.61
LSM5-204ENST00000409909 LINC00526Q96FQ7 95 aa11.25□□□□□ -0.61
LSM5-204ENST00000409909 DPH3Q96FX2 82 aa11.25□□□□□ -0.61
LSM5-204ENST00000409909 SMIM2Q9BVW6 85 aa11.25□□□□□ -0.61
LSM5-204ENST00000409909 A0A087WYN8 130 aa11.24□□□□□ -0.61
LSM5-204ENST00000409909 IGHV1-58A0A0C4DH39 117 aa11.24□□□□□ -0.61
LSM5-204ENST00000409909 KRTAP29-1A8MX34 341 aaPredicted RBP11.24□□□□□ -0.61
LSM5-204ENST00000409909 RPL39P62891 51 aaKnown RBP11.24□□□□□ -0.61
LSM5-204ENST00000409909 ATP5L2Q7Z4Y8 100 aa11.24□□□□□ -0.61
LSM5-204ENST00000409909 FAM104AQ969W3 186 aa11.24□□□□□ -0.61
LSM5-204ENST00000409909 TIMM21Q9BVV7 248 aa11.24□□□□□ -0.61
LSM5-204ENST00000409909 C1orf196B1AJZ1 125 aa11.23□□□□□ -0.61
LSM5-204ENST00000409909 PPBPP02775 128 aa11.23□□□□□ -0.61
LSM5-204ENST00000409909 SMAGPQ0VAQ4 97 aa11.23□□□□□ -0.61
LSM5-204ENST00000409909 PNRC1Q12796 327 aaPredicted RBP11.23□□□□□ -0.61
LSM5-204ENST00000409909 Q6ZUT4 128 aa11.23□□□□□ -0.61
LSM5-204ENST00000409909 J3QL48 77 aa11.22□□□□□ -0.61
LSM5-204ENST00000409909 PHOX2AO14813 284 aa11.22□□□□□ -0.61
LSM5-204ENST00000409909 HNRNPA3P51991 378 aaKnown RBP11.22□□□□□ -0.61
LSM5-204ENST00000409909 CLLU1Q5K131 121 aa11.22□□□□□ -0.61
LSM5-204ENST00000409909 TRAV13-1A0A0B4J241 112 aa11.21□□□□□ -0.61
LSM5-204ENST00000409909 TCAPO15273 167 aa11.21□□□□□ -0.61
LSM5-204ENST00000409909 MT-ND4LP03901 98 aa11.21□□□□□ -0.61
LSM5-204ENST00000409909 TMEM136Q6ZRR5 245 aa11.21□□□□□ -0.61
LSM5-204ENST00000409909 ORMDL3Q8N138 153 aa11.21□□□□□ -0.61
LSM5-204ENST00000409909 TMEM18Q96B42 140 aa11.21□□□□□ -0.61
LSM5-204ENST00000409909 PLAC8Q9NZF1 115 aa11.21□□□□□ -0.61
LSM5-204ENST00000409909 ANAPC16Q96DE5 110 aa11.2□□□□□ -0.62
LSM5-204ENST00000409909 PRELID3AQ96N28 172 aa11.2□□□□□ -0.62
LSM5-204ENST00000409909 OPRPNQ99935 248 aaPredicted RBP11.2□□□□□ -0.62
LSM5-204ENST00000409909 IGKV2-24A0A0C4DH68 120 aa11.19□□□□□ -0.62
LSM5-204ENST00000409909 COX7A2LO14548 114 aa11.19□□□□□ -0.62
LSM5-204ENST00000409909 IFITM2Q01629 132 aa11.19□□□□□ -0.62
LSM5-204ENST00000409909 A0A096LNI7 61 aa11.18□□□□□ -0.62
LSM5-204ENST00000409909 MAJINQ3KP22 176 aa11.18□□□□□ -0.62
LSM5-204ENST00000409909 ZNF561-AS1K7EIQ3 104 aa11.17□□□□□ -0.62
LSM5-204ENST00000409909 MALP21145 153 aa11.17□□□□□ -0.62
LSM5-204ENST00000409909 C5orf38Q86SI9 138 aa11.17□□□□□ -0.62
LSM5-204ENST00000409909 CARD19Q96LW7 228 aa11.17□□□□□ -0.62
LSM5-204ENST00000409909 SPANXA1Q9NS26 97 aa11.17□□□□□ -0.62
LSM5-204ENST00000409909 IGLV4-69A0A075B6H9 119 aa11.16□□□□□ -0.62
LSM5-204ENST00000409909 PRSS47A8MTI9 375 aa11.16□□□□□ -0.62
LSM5-204ENST00000409909 SYCNQ0VAF6 134 aa11.16□□□□□ -0.62
LSM5-204ENST00000409909 ADCYAP1P18509 176 aa11.15□□□□□ -0.62
LSM5-204ENST00000409909 MRPS36P82909 103 aaKnown RBP11.15□□□□□ -0.62
LSM5-204ENST00000409909 LOC389332A0A1B0GUA5 103 aa11.14□□□□□ -0.63
LSM5-204ENST00000409909 OXTP01178 125 aa11.14□□□□□ -0.63
LSM5-204ENST00000409909 RAB5AP20339 215 aa11.14□□□□□ -0.63
LSM5-204ENST00000409909 Q6ZRU5 148 aa11.14□□□□□ -0.63
LSM5-204ENST00000409909 STPG4Q8N801 248 aa11.14□□□□□ -0.63
LSM5-204ENST00000409909 LAMTOR2Q9Y2Q5 125 aa11.13□□□□□ -0.63
LSM5-204ENST00000409909 IGHV3OR16-9A0A0B4J2B5 98 aa11.12□□□□□ -0.63
LSM5-204ENST00000409909 TMEM218A2RU14 115 aa11.12□□□□□ -0.63
LSM5-204ENST00000409909 UQCC3Q6UW78 93 aa11.12□□□□□ -0.63
LSM5-204ENST00000409909 IFITM10A6NMD0 228 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms