RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 IGHV1-58A0A0C4DH39 117 aa9.34□□□□□ -0.92
CBX3-203ENST00000409747 LINC00959A0A1B0GUT2 108 aa9.34□□□□□ -0.92
CBX3-203ENST00000409747 C7orf77A4D0Y5 90 aa9.34□□□□□ -0.92
CBX3-203ENST00000409747 CCL25O15444 150 aa9.34□□□□□ -0.92
CBX3-203ENST00000409747 PPP1R17O96001 155 aa9.34□□□□□ -0.92
CBX3-203ENST00000409747 RAB4AP20338 218 aa9.34□□□□□ -0.92
CBX3-203ENST00000409747 SMAGPQ0VAQ4 97 aa9.34□□□□□ -0.92
CBX3-203ENST00000409747 RIGQ13278 110 aa9.34□□□□□ -0.92
CBX3-203ENST00000409747 SS18Q15532 418 aa9.34□□□□□ -0.92
CBX3-203ENST00000409747 MAJINQ3KP22 176 aa9.34□□□□□ -0.92
CBX3-203ENST00000409747 LINC00474Q9P2X8 69 aa9.34□□□□□ -0.92
CBX3-203ENST00000409747 PLA2G2DQ9UNK4 145 aa9.34□□□□□ -0.92
CBX3-203ENST00000409747 IGKV2-24A0A0C4DH68 120 aa9.33□□□□□ -0.92
CBX3-203ENST00000409747 POLR2KP53803 58 aaKnown RBP9.33□□□□□ -0.92
CBX3-203ENST00000409747 GAS8-AS1O95177 125 aa9.32□□□□□ -0.92
CBX3-203ENST00000409747 SRP19P09132 144 aaKnown RBP9.32□□□□□ -0.92
CBX3-203ENST00000409747 AMN1Q8IY45 258 aa9.32□□□□□ -0.92
CBX3-203ENST00000409747 PRSS3P2Q8NHM4 247 aa9.32□□□□□ -0.92
CBX3-203ENST00000409747 VCYO14598 125 aa9.31□□□□□ -0.92
CBX3-203ENST00000409747 PHOX2AO14813 284 aa9.31□□□□□ -0.92
CBX3-203ENST00000409747 FCER1GP30273 86 aa9.31□□□□□ -0.92
CBX3-203ENST00000409747 FAM74A3Q4VXF1 159 aa9.31□□□□□ -0.92
CBX3-203ENST00000409747 CD164L2Q6UWJ8 174 aa9.31□□□□□ -0.92
CBX3-203ENST00000409747 ZNF664Q8N3J9 261 aa9.31□□□□□ -0.92
CBX3-203ENST00000409747 CDC42SE2Q9NRR3 84 aa9.31□□□□□ -0.92
CBX3-203ENST00000409747 V9GYV3 84 aa9.31□□□□□ -0.92
CBX3-203ENST00000409747 STPG4Q8N801 248 aa9.31□□□□□ -0.92
CBX3-203ENST00000409747 NUP35Q8NFH5 326 aa9.31□□□□□ -0.92
CBX3-203ENST00000409747 CARD19Q96LW7 228 aa9.31□□□□□ -0.92
CBX3-203ENST00000409747 NAT8BQ9UHF3 227 aa9.31□□□□□ -0.92
CBX3-203ENST00000409747 ZNF561-AS1K7EIQ3 104 aa9.3□□□□□ -0.92
CBX3-203ENST00000409747 PPP1R2P9O14990 202 aa9.3□□□□□ -0.92
CBX3-203ENST00000409747 ISOC2Q96AB3 205 aa9.3□□□□□ -0.92
CBX3-203ENST00000409747 KIR2DL4Q99706 377 aa9.3□□□□□ -0.92
CBX3-203ENST00000409747 A0A096LNI7 61 aa9.29□□□□□ -0.92
CBX3-203ENST00000409747 SUMO2P61956 95 aaKnown RBP9.29□□□□□ -0.92
CBX3-203ENST00000409747 TMEM241Q24JQ0 296 aa9.29□□□□□ -0.92
CBX3-203ENST00000409747 CSDC2Q9Y534 153 aaKnown RBP9.29□□□□□ -0.92
CBX3-203ENST00000409747 C1orf196B1AJZ1 125 aa9.28□□□□□ -0.92
CBX3-203ENST00000409747 SMKR1H3BMG3 65 aa9.28□□□□□ -0.92
CBX3-203ENST00000409747 MALP21145 153 aa9.28□□□□□ -0.92
CBX3-203ENST00000409747 TMEM18Q96B42 140 aa9.28□□□□□ -0.92
CBX3-203ENST00000409747 MT1HL1P0DM35 61 aa9.27□□□□□ -0.93
CBX3-203ENST00000409747 RPL23P62829 140 aaKnown RBP9.27□□□□□ -0.93
CBX3-203ENST00000409747 PRR3P79522 188 aaKnown RBP9.27□□□□□ -0.93
CBX3-203ENST00000409747 SYCNQ0VAF6 134 aa9.27□□□□□ -0.93
CBX3-203ENST00000409747 NRACQ8N912 160 aa9.27□□□□□ -0.93
CBX3-203ENST00000409747 A0A1B0GW15 77 aa9.26□□□□□ -0.93
CBX3-203ENST00000409747 LINC00862A6NCI5 91 aa9.26□□□□□ -0.93
CBX3-203ENST00000409747 COX7A2LO14548 114 aa9.26□□□□□ -0.93
CBX3-203ENST00000409747 CAMPP49913 170 aa9.26□□□□□ -0.93
CBX3-203ENST00000409747 ADIRFQ15847 76 aa9.26□□□□□ -0.93
CBX3-203ENST00000409747 NAT8Q9UHE5 227 aa9.26□□□□□ -0.93
CBX3-203ENST00000409747 UBE2D4Q9Y2X8 147 aa9.26□□□□□ -0.93
CBX3-203ENST00000409747 TCAPO15273 167 aa9.25□□□□□ -0.93
CBX3-203ENST00000409747 FAM104BQ5XKR9 115 aa9.25□□□□□ -0.93
CBX3-203ENST00000409747 LINC00526Q96FQ7 95 aa9.25□□□□□ -0.93
CBX3-203ENST00000409747 SMIM27A0A1W2PRY6 76 aa9.25□□□□□ -0.93
CBX3-203ENST00000409747 C20orf78Q9BR46 151 aa9.25□□□□□ -0.93
CBX3-203ENST00000409747 PEA15Q15121 130 aa9.24□□□□□ -0.93
CBX3-203ENST00000409747 MRPL51Q4U2R6 128 aaKnown RBP9.24□□□□□ -0.93
CBX3-203ENST00000409747 TIMM21Q9BVV7 248 aa9.24□□□□□ -0.93
CBX3-203ENST00000409747 SMDT1Q9H4I9 107 aa9.24□□□□□ -0.93
CBX3-203ENST00000409747 S100A8P05109 93 aa9.23□□□□□ -0.93
CBX3-203ENST00000409747 RPL32P62910 135 aaKnown RBP9.23□□□□□ -0.93
CBX3-203ENST00000409747 IGLV4-69A0A075B6H9 119 aa9.22□□□□□ -0.93
CBX3-203ENST00000409747 TRBV24-1A0A075B6N3 115 aa9.22□□□□□ -0.93
CBX3-203ENST00000409747 TRAV13-1A0A0B4J241 112 aa9.22□□□□□ -0.93
CBX3-203ENST00000409747 LOC107984640A0A0U1RRK4 108 aa9.22□□□□□ -0.93
CBX3-203ENST00000409747 APOMO95445 188 aa9.22□□□□□ -0.93
CBX3-203ENST00000409747 CKS2P33552 79 aa9.22□□□□□ -0.93
CBX3-203ENST00000409747 F8W036 122 aa9.22□□□□□ -0.93
CBX3-203ENST00000409747 PTTG1IPP53801 180 aa9.22□□□□□ -0.93
CBX3-203ENST00000409747 Q6ZUT4 128 aa9.22□□□□□ -0.93
CBX3-203ENST00000409747 RNASE13Q5GAN3 156 aaKnown RBP9.21□□□□□ -0.94
CBX3-203ENST00000409747 C2orf48Q96LS8 159 aa9.21□□□□□ -0.94
CBX3-203ENST00000409747 CAMK2N2Q96S95 79 aa9.21□□□□□ -0.94
CBX3-203ENST00000409747 HBBP68871 147 aa9.2□□□□□ -0.94
CBX3-203ENST00000409747 SPINK6Q6UWN8 80 aa9.2□□□□□ -0.94
CBX3-203ENST00000409747 Q6ZRP5 223 aa9.2□□□□□ -0.94
CBX3-203ENST00000409747 UBR4Q5T4S7 5183 aa9.2□□□□□ -0.94
CBX3-203ENST00000409747 C9JQL5 133 aa9.19□□□□□ -0.94
CBX3-203ENST00000409747 TNFRSF6BO95407 300 aa9.19□□□□□ -0.94
CBX3-203ENST00000409747 LINC01600Q96MT4 127 aa9.19□□□□□ -0.94
CBX3-203ENST00000409747 SMIM2Q9BVW6 85 aa9.19□□□□□ -0.94
CBX3-203ENST00000409747 GAGE2BQ13066 116 aa9.19□□□□□ -0.94
CBX3-203ENST00000409747 REG3GQ6UW15 175 aa9.19□□□□□ -0.94
CBX3-203ENST00000409747 SPANXA1Q9NS26 97 aa9.19□□□□□ -0.94
CBX3-203ENST00000409747 D6R8Y8 96 aa9.18□□□□□ -0.94
CBX3-203ENST00000409747 PPBPP02775 128 aa9.18□□□□□ -0.94
CBX3-203ENST00000409747 SPAG11BQ08648 103 aa9.18□□□□□ -0.94
CBX3-203ENST00000409747 MRPL54Q6P161 138 aaKnown RBP9.18□□□□□ -0.94
CBX3-203ENST00000409747 C5orf38Q86SI9 138 aa9.18□□□□□ -0.94
CBX3-203ENST00000409747 OR10D4PQ8NGN7 298 aa9.18□□□□□ -0.94
CBX3-203ENST00000409747 TNXBP22105 4242 aa9.18□□□□□ -0.94
CBX3-203ENST00000409747 SRSF3P84103 164 aaKnown RBP9.17□□□□□ -0.94
CBX3-203ENST00000409747 F8WDY8 70 aa9.17□□□□□ -0.94
CBX3-203ENST00000409747 RPL39P62891 51 aaKnown RBP9.17□□□□□ -0.94
CBX3-203ENST00000409747 MRPS36P82909 103 aaKnown RBP9.17□□□□□ -0.94
CBX3-203ENST00000409747 A0A1B0GVG6 124 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms