RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 VAMP3Q15836 100 aa14.66□□□□□ -0.06
USP39-203ENST00000409470 PLEKHB2Q96CS7 222 aa14.66□□□□□ -0.06
USP39-203ENST00000409470 IGHV3-64A0A075B6Q5 118 aa14.65□□□□□ -0.06
USP39-203ENST00000409470 LEPROTO15243 131 aa14.65□□□□□ -0.06
USP39-203ENST00000409470 WIPF1O43516 503 aa14.65□□□□□ -0.06
USP39-203ENST00000409470 LINC00694P0DN24 101 aa14.65□□□□□ -0.06
USP39-203ENST00000409470 LINC00612Q8N6U2 182 aa14.65□□□□□ -0.06
USP39-203ENST00000409470 GTSF1LQ9H1H1 148 aa14.65□□□□□ -0.06
USP39-203ENST00000409470 TINCRA0A1B0GVN0 87 aa14.64□□□□□ -0.07
USP39-203ENST00000409470 RAB37Q96AX2 223 aa14.64□□□□□ -0.07
USP39-203ENST00000409470 SMIM13P0DJ93 91 aa14.63□□□□□ -0.07
USP39-203ENST00000409470 UBE2L6O14933 153 aa14.63□□□□□ -0.07
USP39-203ENST00000409470 SMAGPQ0VAQ4 97 aa14.63□□□□□ -0.07
USP39-203ENST00000409470 TMEM243Q9BU79 118 aa14.63□□□□□ -0.07
USP39-203ENST00000409470 SBSPONQ8IVN8 264 aa14.62□□□□□ -0.07
USP39-203ENST00000409470 GEMIN7Q9H840 131 aaKnown RBP14.62□□□□□ -0.07
USP39-203ENST00000409470 TRRAPQ9Y4A5 3859 aa14.62□□□□□ -0.07
USP39-203ENST00000409470 UBE2D1P51668 147 aa14.61□□□□□ -0.07
USP39-203ENST00000409470 FAM222AQ5U5X8 452 aa14.61□□□□□ -0.07
USP39-203ENST00000409470 NHP2Q9NX24 153 aaKnown RBP14.61□□□□□ -0.07
USP39-203ENST00000409470 C9orf118A6NHY6 69 aa14.61□□□□□ -0.07
USP39-203ENST00000409470 AMMECR1LQ6DCA0 310 aa14.61□□□□□ -0.07
USP39-203ENST00000409470 C3orf56Q8N813 242 aa14.61□□□□□ -0.07
USP39-203ENST00000409470 CSDC2Q9Y534 153 aaKnown RBP14.61□□□□□ -0.07
USP39-203ENST00000409470 LYRM9A8MSI8 78 aa14.6□□□□□ -0.07
USP39-203ENST00000409470 IGHV4-30-4P0DP06 118 aa14.6□□□□□ -0.07
USP39-203ENST00000409470 SRSF9Q13242 221 aaKnown RBP eCLIP14.6□□□□□ -0.07
USP39-203ENST00000409470 UBE2V1Q13404 147 aa14.6□□□□□ -0.07
USP39-203ENST00000409470 DEFB4AO15263 64 aa14.59□□□□□ -0.07
USP39-203ENST00000409470 OR5A1Q8NGJ0 315 aa14.59□□□□□ -0.07
USP39-203ENST00000409470 A0A0J9YY99 117 aa14.59□□□□□ -0.07
USP39-203ENST00000409470 IGHV4-28A0A0C4DH34 117 aa14.58□□□□□ -0.08
USP39-203ENST00000409470 K7ERJ3 54 aa14.58□□□□□ -0.08
USP39-203ENST00000409470 TMEM101Q96IK0 257 aa14.58□□□□□ -0.08
USP39-203ENST00000409470 NBEAL2Q6ZNJ1 2754 aa14.58□□□□□ -0.08
USP39-203ENST00000409470 H3BUT2 72 aa14.58□□□□□ -0.08
USP39-203ENST00000409470 IGHV3-30-3P0DP02 117 aa14.58□□□□□ -0.08
USP39-203ENST00000409470 OXLD1Q5BKU9 147 aa14.58□□□□□ -0.08
USP39-203ENST00000409470 TRAV8-3A0A0A6YYJ7 113 aa14.57□□□□□ -0.08
USP39-203ENST00000409470 NAA38Q9BRA0 125 aaKnown RBP14.57□□□□□ -0.08
USP39-203ENST00000409470 CCL25O15444 150 aa14.56□□□□□ -0.08
USP39-203ENST00000409470 TIRAPP58753 221 aa14.56□□□□□ -0.08
USP39-203ENST00000409470 CDC42SE2Q9NRR3 84 aa14.56□□□□□ -0.08
USP39-203ENST00000409470 IGHV1-58A0A0C4DH39 117 aa14.56□□□□□ -0.08
USP39-203ENST00000409470 H7C423 109 aa14.56□□□□□ -0.08
USP39-203ENST00000409470 SPINK8P0C7L1 97 aa14.56□□□□□ -0.08
USP39-203ENST00000409470 GYPEP15421 78 aa14.56□□□□□ -0.08
USP39-203ENST00000409470 TRBV6-8A0A0A6YYG3 113 aa14.55□□□□□ -0.08
USP39-203ENST00000409470 MIFP14174 115 aa14.55□□□□□ -0.08
USP39-203ENST00000409470 PRO0255Q9UI72 69 aa14.55□□□□□ -0.08
USP39-203ENST00000409470 SHISA2Q6UWI4 295 aa14.54□□□□□ -0.08
USP39-203ENST00000409470 CDKN2A-AS1Q9UH64 79 aa14.54□□□□□ -0.08
USP39-203ENST00000409470 TRAV13-1A0A0B4J241 112 aa14.54□□□□□ -0.08
USP39-203ENST00000409470 HERVK_113P63121 156 aa14.54□□□□□ -0.08
USP39-203ENST00000409470 GAGE6Q13070 117 aa14.54□□□□□ -0.08
USP39-203ENST00000409470 C12orf74Q32Q52 190 aa14.54□□□□□ -0.08
USP39-203ENST00000409470 RNF183Q96D59 192 aa14.54□□□□□ -0.08
USP39-203ENST00000409470 VSIG2Q96IQ7 327 aa14.54□□□□□ -0.08
USP39-203ENST00000409470 Q8NAQ8 132 aa14.53□□□□□ -0.08
USP39-203ENST00000409470 SPANXB1Q9NS25 103 aaPredicted RBP14.53□□□□□ -0.08
USP39-203ENST00000409470 DAD1P61803 113 aa14.53□□□□□ -0.08
USP39-203ENST00000409470 COX6A2Q02221 97 aa14.53□□□□□ -0.08
USP39-203ENST00000409470 LINC00242Q5T6M2 205 aa14.53□□□□□ -0.08
USP39-203ENST00000409470 ATP6V0E2Q8NHE4 81 aa14.53□□□□□ -0.08
USP39-203ENST00000409470 CHCHD5Q9BSY4 110 aa14.53□□□□□ -0.08
USP39-203ENST00000409470 IGLV5-45A0A087WSX0 123 aa14.52□□□□□ -0.09
USP39-203ENST00000409470 TMEM238LA0A1B0GVL6 79 aa14.51□□□□□ -0.09
USP39-203ENST00000409470 A6NJY4 79 aa14.51□□□□□ -0.09
USP39-203ENST00000409470 CYSRT1A8MQ03 144 aa14.51□□□□□ -0.09
USP39-203ENST00000409470 PAX4O43316 350 aa14.51□□□□□ -0.09
USP39-203ENST00000409470 KRTAP10-11P60412 298 aa14.51□□□□□ -0.09
USP39-203ENST00000409470 SAMD5Q5TGI4 173 aa14.51□□□□□ -0.09
USP39-203ENST00000409470 FAM19A3Q7Z5A8 133 aa14.5□□□□□ -0.09
USP39-203ENST00000409470 C10orf126Q8N4M7 172 aa14.5□□□□□ -0.09
USP39-203ENST00000409470 A0A1W2PPM0 123 aa14.49□□□□□ -0.09
USP39-203ENST00000409470 A8MZ25 164 aa14.49□□□□□ -0.09
USP39-203ENST00000409470 GAGE10A6NGK3 116 aa14.49□□□□□ -0.09
USP39-203ENST00000409470 PRIMA1Q86XR5 153 aa14.49□□□□□ -0.09
USP39-203ENST00000409470 NDUFA12Q9UI09 145 aa14.49□□□□□ -0.09
USP39-203ENST00000409470 CELA1Q9UNI1 258 aa14.49□□□□□ -0.09
USP39-203ENST00000409470 BAHCC1Q9P281 2608 aa14.48□□□□□ -0.09
USP39-203ENST00000409470 A0A0J9YXY3 114 aa14.48□□□□□ -0.09
USP39-203ENST00000409470 IGHV3-30P01768 117 aa14.48□□□□□ -0.09
USP39-203ENST00000409470 IGHV3-30-5P0DP03 117 aa14.48□□□□□ -0.09
USP39-203ENST00000409470 A0A1B0GWB2 263 aa14.48□□□□□ -0.09
USP39-203ENST00000409470 SPART-AS1P0CW21 52 aa14.48□□□□□ -0.09
USP39-203ENST00000409470 FBN1P35555 2871 aaKnown RBP14.47□□□□□ -0.09
USP39-203ENST00000409470 FABP2P12104 132 aa14.47□□□□□ -0.09
USP39-203ENST00000409470 GTF2H5Q6ZYL4 71 aa14.47□□□□□ -0.09
USP39-203ENST00000409470 A0A096LPF7 62 aa14.46□□□□□ -0.09
USP39-203ENST00000409470 TMEM238C9JI98 176 aa14.46□□□□□ -0.09
USP39-203ENST00000409470 ATP5G1P05496 136 aa14.46□□□□□ -0.09
USP39-203ENST00000409470 IGLV4-60A0A075B6I1 120 aa14.45□□□□□ -0.1
USP39-203ENST00000409470 IGLL5B9A064 214 aa14.45□□□□□ -0.1
USP39-203ENST00000409470 EGFEM1PQ0D2K5 195 aa14.45□□□□□ -0.1
USP39-203ENST00000409470 ZFAND6Q6FIF0 208 aa14.45□□□□□ -0.1
USP39-203ENST00000409470 IGKV3OR2-268A0A0C4DH90 116 aa14.44□□□□□ -0.1
USP39-203ENST00000409470 K7EP34 96 aa14.44□□□□□ -0.1
USP39-203ENST00000409470 SPCS1Q9Y6A9 102 aa14.44□□□□□ -0.1
USP39-203ENST00000409470 STAB1Q9NY15 2570 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms