RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ESM1Q9NQ30 184 aa7.07□□□□□ -1.28
MSH2-202ENST00000406134 LOC107984156A0A0G2JMH3 177 aa7.07□□□□□ -1.28
MSH2-202ENST00000406134 TINCRA0A1B0GVN0 87 aa7.07□□□□□ -1.28
MSH2-202ENST00000406134 ARL17AQ8IVW1 177 aa7.07□□□□□ -1.28
MSH2-202ENST00000406134 TEX29Q8N6K0 151 aa7.07□□□□□ -1.28
MSH2-202ENST00000406134 VSIG2Q96IQ7 327 aa7.07□□□□□ -1.28
MSH2-202ENST00000406134 IGLV5-45A0A087WSX0 123 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 IGHV3-38A0A0C4DH36 116 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 IGHV1-58A0A0C4DH39 117 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 GIG44P09565 113 aaPredicted RBP7.06□□□□□ -1.28
MSH2-202ENST00000406134 ZFAND6Q6FIF0 208 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 COX6A2Q02221 97 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 PPDPFQ9H3Y8 114 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 FLNBO75369 2602 aaKnown RBP7.06□□□□□ -1.28
MSH2-202ENST00000406134 FLNAP21333 2647 aaKnown RBP7.06□□□□□ -1.28
MSH2-202ENST00000406134 HIVEP2P31629 2446 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 GAGE12JA6NER3 117 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 GAGE7O76087 117 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 GAGE12FP0CL80 117 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 GAGE12GP0CL81 117 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 GAGE12IP0CL82 117 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 XGP55808 180 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 ZNF415Q09FC8 603 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 GAGE4Q13068 117 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 Q96MF0 132 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 LINC01600Q96MT4 127 aa7.06□□□□□ -1.28
MSH2-202ENST00000406134 SPANXDQ9BXN6 97 aa7.05□□□□□ -1.28
MSH2-202ENST00000406134 SPANXCQ9NY87 97 aa7.05□□□□□ -1.28
MSH2-202ENST00000406134 C2CD3Q4AC94 2353 aa7.05□□□□□ -1.28
MSH2-202ENST00000406134 LINC00694P0DN24 101 aa7.05□□□□□ -1.28
MSH2-202ENST00000406134 NTM-AS1Q6ZSK4 140 aa7.05□□□□□ -1.28
MSH2-202ENST00000406134 TIMM21Q9BVV7 248 aa7.05□□□□□ -1.28
MSH2-202ENST00000406134 PLAC8L1A1L4L8 177 aa7.05□□□□□ -1.28
MSH2-202ENST00000406134 LRRC75A-AS1Q8N1F1 130 aa7.05□□□□□ -1.28
MSH2-202ENST00000406134 IGHV3OR16-12A0A075B7B8 117 aa7.04□□□□□ -1.28
MSH2-202ENST00000406134 CCDC179H3BU77 68 aa7.04□□□□□ -1.28
MSH2-202ENST00000406134 TEN1Q86WV5 123 aa7.04□□□□□ -1.28
MSH2-202ENST00000406134 ANKRD29Q8N6D5 301 aa7.04□□□□□ -1.28
MSH2-202ENST00000406134 C3orf56Q8N813 242 aa7.04□□□□□ -1.28
MSH2-202ENST00000406134 NDUFA7O95182 113 aa7.04□□□□□ -1.28
MSH2-202ENST00000406134 KRTAP1-1Q07627 177 aa7.04□□□□□ -1.28
MSH2-202ENST00000406134 FAM19A3Q7Z5A8 133 aa7.04□□□□□ -1.28
MSH2-202ENST00000406134 SPANXA1Q9NS26 97 aa7.04□□□□□ -1.28
MSH2-202ENST00000406134 TRIAP1O43715 76 aa7.03□□□□□ -1.28
MSH2-202ENST00000406134 PEMTQ9UBM1 199 aa7.03□□□□□ -1.28
MSH2-202ENST00000406134 CDKN2A-AS1Q9UH64 79 aa7.03□□□□□ -1.28
MSH2-202ENST00000406134 VWFP04275 2813 aa7.03□□□□□ -1.28
MSH2-202ENST00000406134 DNAJC9-AS1A6NH13 148 aa7.02□□□□□ -1.29
MSH2-202ENST00000406134 DNAJC30Q96LL9 226 aa7.02□□□□□ -1.29
MSH2-202ENST00000406134 ANK2Q01484 3957 aa7.02□□□□□ -1.29
MSH2-202ENST00000406134 INSP01308 110 aa7.02□□□□□ -1.29
MSH2-202ENST00000406134 MIAQ16674 131 aa7.02□□□□□ -1.29
MSH2-202ENST00000406134 TTC32Q5I0X7 151 aa7.02□□□□□ -1.29
MSH2-202ENST00000406134 TMEM101Q96IK0 257 aa7.02□□□□□ -1.29
MSH2-202ENST00000406134 LINC01587Q99440 93 aa7.02□□□□□ -1.29
MSH2-202ENST00000406134 XCL2Q9UBD3 114 aa7.02□□□□□ -1.29
MSH2-202ENST00000406134 IGLV5-39A0A0G2JS06 123 aa7.02□□□□□ -1.29
MSH2-202ENST00000406134 C19orf73Q9NVV2 129 aa7.01□□□□□ -1.29
MSH2-202ENST00000406134 NDUFA12Q9UI09 145 aa7.01□□□□□ -1.29
MSH2-202ENST00000406134 TRBV30A0A0K0K1B3 111 aa7.01□□□□□ -1.29
MSH2-202ENST00000406134 LINC00242Q5T6M2 205 aa7.01□□□□□ -1.29
MSH2-202ENST00000406134 CMYA5Q8N3K9 4069 aa7.01□□□□□ -1.29
MSH2-202ENST00000406134 C5orf47Q569G3 176 aa7.01□□□□□ -1.29
MSH2-202ENST00000406134 WFDC11Q8NEX6 87 aa7.01□□□□□ -1.29
MSH2-202ENST00000406134 CITED2Q99967 270 aaPredicted RBP7.01□□□□□ -1.29
MSH2-202ENST00000406134 F5H768 121 aa7□□□□□ -1.29
MSH2-202ENST00000406134 TIRAPP58753 221 aa7□□□□□ -1.29
MSH2-202ENST00000406134 PPDPFLQ8WWR9 84 aa7□□□□□ -1.29
MSH2-202ENST00000406134 ITPR2Q14571 2701 aa7□□□□□ -1.29
MSH2-202ENST00000406134 Q6ZTI0 123 aa7□□□□□ -1.29
MSH2-202ENST00000406134 WFDC10AQ9H1F0 79 aa7□□□□□ -1.29
MSH2-202ENST00000406134 NDUFA1O15239 70 aa7□□□□□ -1.29
MSH2-202ENST00000406134 SLC25A20O43772 301 aa7□□□□□ -1.29
MSH2-202ENST00000406134 SOSTDC1Q6X4U4 206 aa7□□□□□ -1.29
MSH2-202ENST00000406134 TMEM86BQ8N661 226 aa7□□□□□ -1.29
MSH2-202ENST00000406134 DAND5Q8N907 189 aa7□□□□□ -1.29
MSH2-202ENST00000406134 DYNLRB2Q8TF09 96 aa6.99□□□□□ -1.29
MSH2-202ENST00000406134 H7C2G1 150 aa6.99□□□□□ -1.29
MSH2-202ENST00000406134 NPC2P61916 151 aa6.99□□□□□ -1.29
MSH2-202ENST00000406134 GAGE2BQ13066 116 aa6.99□□□□□ -1.29
MSH2-202ENST00000406134 GAGE2EQ4V326 116 aa6.99□□□□□ -1.29
MSH2-202ENST00000406134 C11orf44Q8N8P7 122 aa6.99□□□□□ -1.29
MSH2-202ENST00000406134 CSNK1G2-AS1Q8NCQ2 148 aa6.99□□□□□ -1.29
MSH2-202ENST00000406134 GAGE2DQ9UEU5 116 aa6.99□□□□□ -1.29
MSH2-202ENST00000406134 FN1P02751 2386 aaKnown RBP6.99□□□□□ -1.29
MSH2-202ENST00000406134 HECTD1Q9ULT8 2610 aa6.99□□□□□ -1.29
MSH2-202ENST00000406134 TRRAPQ9Y4A5 3859 aa6.99□□□□□ -1.29
MSH2-202ENST00000406134 SMIM1B2RUZ4 78 aa6.99□□□□□ -1.29
MSH2-202ENST00000406134 C9JAW5 83 aa6.99□□□□□ -1.29
MSH2-202ENST00000406134 TIMM17BO60830 172 aa6.99□□□□□ -1.29
MSH2-202ENST00000406134 MEIG1Q5JSS6 88 aa6.99□□□□□ -1.29
MSH2-202ENST00000406134 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.98□□□□□ -1.29
MSH2-202ENST00000406134 PLA2G2AP14555 144 aa6.98□□□□□ -1.29
MSH2-202ENST00000406134 KHDC1LQ5JSQ8 128 aa6.98□□□□□ -1.29
MSH2-202ENST00000406134 HIST2H2BCQ6DN03 193 aa6.98□□□□□ -1.29
MSH2-202ENST00000406134 NHLRC4P0CG21 123 aaPredicted RBP6.98□□□□□ -1.29
MSH2-202ENST00000406134 ICOSQ9Y6W8 199 aa6.98□□□□□ -1.29
MSH2-202ENST00000406134 TRAV25A0A0B4J276 109 aa6.97□□□□□ -1.29
MSH2-202ENST00000406134 A0A1W2PRX2 142 aa6.97□□□□□ -1.29
MSH2-202ENST00000406134 LINC01620Q4KN68 170 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms