RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	CIRBP	Q14011	172 aa	Known RBP	4.26	□□□□□ -1.73
CEACAM1-208	ENST00000403461	FAM74A3	Q4VXF1	159 aa		4.26	□□□□□ -1.73
CEACAM1-208	ENST00000403461	REG3G	Q6UW15	175 aa		4.26	□□□□□ -1.73
CEACAM1-208	ENST00000403461	CLPSL2	Q6UWE3	100 aa		4.26	□□□□□ -1.73
CEACAM1-208	ENST00000403461		Q86TA4	180 aa		4.26	□□□□□ -1.73
CEACAM1-208	ENST00000403461	LINC00269	Q8N2A0	174 aa		4.26	□□□□□ -1.73
CEACAM1-208	ENST00000403461	HIST1H2BA	Q96A08	127 aa		4.26	□□□□□ -1.73
CEACAM1-208	ENST00000403461	MARVELD1	Q9BSK0	173 aa		4.26	□□□□□ -1.73
CEACAM1-208	ENST00000403461	PSMG3	Q9BT73	122 aa	Predicted RBP	4.26	□□□□□ -1.73
CEACAM1-208	ENST00000403461	NKX6-2	Q9C056	277 aa	Predicted RBP	4.26	□□□□□ -1.73
CEACAM1-208	ENST00000403461	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.26	□□□□□ -1.73
CEACAM1-208	ENST00000403461	PRR34	Q9NV39	138 aa		4.26	□□□□□ -1.73
CEACAM1-208	ENST00000403461	ZFP30	Q9Y2G7	519 aa		4.26	□□□□□ -1.73
CEACAM1-208	ENST00000403461	TRBV25-1	A0A075B6N4	114 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	TMSB15B	A0A087X1C1	80 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	TRAV8-4	A0A0B4J246	113 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	PANO1	I0J062	215 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	PEX7	O00628	323 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	PHOX2A	O14813	284 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	SH2D1A	O60880	128 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461		P01737	135 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	SMIM17	P0DL12	118 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	GZMB	P10144	247 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	SERF2	P84101	59 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	REG3A	Q06141	175 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	SPACA4	Q8TDM5	124 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	GTSF1	Q8WW33	167 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	FMC1	Q96HJ9	113 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	C2orf48	Q96LS8	159 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	LINC01600	Q96MT4	127 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	DERL1	Q9BUN8	251 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	PKIG	Q9Y2B9	76 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	LRP2	P98164	4655 aa		4.25	□□□□□ -1.73
CEACAM1-208	ENST00000403461	IGLV10-54	A0A075B6I4	117 aa		4.24	□□□□□ -1.73
CEACAM1-208	ENST00000403461	IGHV1-24	A0A0C4DH33	117 aa		4.24	□□□□□ -1.73
CEACAM1-208	ENST00000403461	SPANXN1	Q5VSR9	72 aa		4.24	□□□□□ -1.73
CEACAM1-208	ENST00000403461	ISOC2	Q96AB3	205 aa		4.24	□□□□□ -1.73
CEACAM1-208	ENST00000403461	FAM218A	Q96MZ4	157 aa		4.24	□□□□□ -1.73
CEACAM1-208	ENST00000403461	ZNF471	Q9BX82	626 aa	Predicted RBP	4.24	□□□□□ -1.73
CEACAM1-208	ENST00000403461	WFDC1	Q9HC57	220 aa		4.24	□□□□□ -1.73
CEACAM1-208	ENST00000403461	TNFSF18	Q9UNG2	199 aa		4.24	□□□□□ -1.73
CEACAM1-208	ENST00000403461	ALG5	Q9Y673	324 aa		4.24	□□□□□ -1.73
CEACAM1-208	ENST00000403461	KIF25-AS1	Q9Y6Z4	181 aa		4.24	□□□□□ -1.73
CEACAM1-208	ENST00000403461		A0A0J9YXV3	536 aa		4.23	□□□□□ -1.73
CEACAM1-208	ENST00000403461	TRBV6-1	A0A0K0K1D8	114 aa		4.23	□□□□□ -1.73
CEACAM1-208	ENST00000403461	TSPAN13	O95857	204 aa		4.23	□□□□□ -1.73
CEACAM1-208	ENST00000403461	CHTF8	P0CG12	524 aa		4.23	□□□□□ -1.73
CEACAM1-208	ENST00000403461	ATP6V0C	P27449	155 aa		4.23	□□□□□ -1.73
CEACAM1-208	ENST00000403461	SULT1A2	P50226	295 aa		4.23	□□□□□ -1.73
CEACAM1-208	ENST00000403461	PRR3	P79522	188 aa	Known RBP	4.23	□□□□□ -1.73
CEACAM1-208	ENST00000403461	IQCJ	Q1A5X6	159 aa		4.23	□□□□□ -1.73
CEACAM1-208	ENST00000403461	SPINK6	Q6UWN8	80 aa		4.23	□□□□□ -1.73
CEACAM1-208	ENST00000403461	PACRG	Q96M98	296 aa	Predicted RBP	4.23	□□□□□ -1.73
CEACAM1-208	ENST00000403461	TCEAL7	Q9BRU2	100 aa		4.23	□□□□□ -1.73
CEACAM1-208	ENST00000403461	PLAC8	Q9NZF1	115 aa		4.23	□□□□□ -1.73
CEACAM1-208	ENST00000403461	LINC00474	Q9P2X8	69 aa		4.23	□□□□□ -1.73
CEACAM1-208	ENST00000403461	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461	IGKV2-24	A0A0C4DH68	120 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461	CTXND1	A0A1B0GTU2	59 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461		F8W036	122 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461		H7C1H1	209 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461		M0QXV9	152 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461	UBE2L6	O14933	153 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461	ATP5L	O75964	103 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461	LINC00614	P0C842	121 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461	AKR1C3	P42330	323 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461	OR10AG1	Q8NH19	301 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461	STOML3	Q8TAV4	291 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461	AP1S3	Q96PC3	154 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461	AQP10	Q96PS8	301 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461	TMEM243	Q9BU79	118 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461	MED28	Q9H204	178 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461	VAX2	Q9UIW0	290 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461		V9GYY9	64 aa		4.22	□□□□□ -1.73
CEACAM1-208	ENST00000403461	KRTAP16-1	A8MUX0	517 aa		4.21	□□□□□ -1.74
CEACAM1-208	ENST00000403461	LTA	P01374	205 aa		4.21	□□□□□ -1.74
CEACAM1-208	ENST00000403461	MGP	P08493	103 aa		4.21	□□□□□ -1.74
CEACAM1-208	ENST00000403461	CXCL1	P09341	107 aa		4.21	□□□□□ -1.74
CEACAM1-208	ENST00000403461	RPS10	P46783	165 aa	Known RBP	4.21	□□□□□ -1.74
CEACAM1-208	ENST00000403461	CRIP1	P50238	77 aa		4.21	□□□□□ -1.74
CEACAM1-208	ENST00000403461	RAB5C	P51148	216 aa		4.21	□□□□□ -1.74
CEACAM1-208	ENST00000403461	COX6A2	Q02221	97 aa		4.21	□□□□□ -1.74
CEACAM1-208	ENST00000403461	AKR1C8P	Q5T2L2	129 aa		4.21	□□□□□ -1.74
CEACAM1-208	ENST00000403461	KRTAP26-1	Q6PEX3	210 aa		4.21	□□□□□ -1.74
CEACAM1-208	ENST00000403461	NTM-AS1	Q6ZSK4	140 aa		4.21	□□□□□ -1.74
CEACAM1-208	ENST00000403461	LYPD6B	Q8NI32	183 aa		4.21	□□□□□ -1.74
CEACAM1-208	ENST00000403461	PKHD1L1	Q86WI1	4243 aa		4.2	□□□□□ -1.74
CEACAM1-208	ENST00000403461		A0A087WZ39	114 aa		4.2	□□□□□ -1.74
CEACAM1-208	ENST00000403461	COX19	Q49B96	90 aa		4.2	□□□□□ -1.74
CEACAM1-208	ENST00000403461	FXYD6-FXYD2	A0A087WZ82	144 aa		4.19	□□□□□ -1.74
CEACAM1-208	ENST00000403461	MUC21	A0A0G2JKD1	596 aa		4.19	□□□□□ -1.74
CEACAM1-208	ENST00000403461	MUC21	A0A140T8X8	626 aa		4.19	□□□□□ -1.74
CEACAM1-208	ENST00000403461	MAP1LC3B2	A6NCE7	125 aa		4.19	□□□□□ -1.74
CEACAM1-208	ENST00000403461	FAM231B	A6NCW3	169 aa		4.19	□□□□□ -1.74
CEACAM1-208	ENST00000403461	OR5AL1	P0C617	328 aa		4.19	□□□□□ -1.74
CEACAM1-208	ENST00000403461	S100P	P25815	95 aa		4.19	□□□□□ -1.74
CEACAM1-208	ENST00000403461		Q5BKY6	102 aa		4.19	□□□□□ -1.74
CEACAM1-208	ENST00000403461	C20orf203	Q8NBC4	194 aa		4.19	□□□□□ -1.74
CEACAM1-208	ENST00000403461	MAP1LC3B	Q9GZQ8	125 aa		4.19	□□□□□ -1.74
CEACAM1-208	ENST00000403461	IGLV4-60	A0A075B6I1	120 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms