RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 HTN1P15515 57 aa14.4□□□□□ -0.1
CCDC47-202ENST00000403162 RPL13AP40429 203 aaKnown RBP14.4□□□□□ -0.1
CCDC47-202ENST00000403162 HILS1P60008 231 aa14.4□□□□□ -0.1
CCDC47-202ENST00000403162 ADAMTSL4-AS1Q5T5F5 129 aa14.4□□□□□ -0.1
CCDC47-202ENST00000403162 RNF183Q96D59 192 aa14.4□□□□□ -0.1
CCDC47-202ENST00000403162 NTN5Q8WTR8 489 aaPredicted RBP14.4□□□□□ -0.1
CCDC47-202ENST00000403162 TRAV26-1A0A087WT03 109 aa14.39□□□□□ -0.11
CCDC47-202ENST00000403162 H3BMM0 161 aa14.39□□□□□ -0.11
CCDC47-202ENST00000403162 CRLF1O75462 422 aa14.39□□□□□ -0.11
CCDC47-202ENST00000403162 PRSS2P07478 247 aa14.39□□□□□ -0.11
CCDC47-202ENST00000403162 CITED1Q99966 193 aa14.39□□□□□ -0.11
CCDC47-202ENST00000403162 DEFB131AP59861 70 aa14.39□□□□□ -0.11
CCDC47-202ENST00000403162 ZNF415Q09FC8 603 aa14.39□□□□□ -0.11
CCDC47-202ENST00000403162 RNASE13Q5GAN3 156 aaKnown RBP14.39□□□□□ -0.11
CCDC47-202ENST00000403162 DUX3Q96PT4 197 aa14.39□□□□□ -0.11
CCDC47-202ENST00000403162 ICOSQ9Y6W8 199 aa14.39□□□□□ -0.11
CCDC47-202ENST00000403162 SORL1Q92673 2214 aa14.38□□□□□ -0.11
CCDC47-202ENST00000403162 RNASE1P07998 156 aaKnown RBP14.38□□□□□ -0.11
CCDC47-202ENST00000403162 RBMY1BA6NDE4 496 aaKnown RBP14.37□□□□□ -0.11
CCDC47-202ENST00000403162 RBMY1EA6NEQ0 496 aaKnown RBP14.37□□□□□ -0.11
CCDC47-202ENST00000403162 RBMY1DP0C7P1 496 aaKnown RBP14.37□□□□□ -0.11
CCDC47-202ENST00000403162 ZFAND6Q6FIF0 208 aa14.37□□□□□ -0.11
CCDC47-202ENST00000403162 Q6ZSN1 163 aa14.37□□□□□ -0.11
CCDC47-202ENST00000403162 TIMM17BO60830 172 aa14.37□□□□□ -0.11
CCDC47-202ENST00000403162 Q9UF83 564 aa14.37□□□□□ -0.11
CCDC47-202ENST00000403162 FN1P02751 2386 aaKnown RBP14.37□□□□□ -0.11
CCDC47-202ENST00000403162 NSD1Q96L73 2696 aaPredicted RBP14.36□□□□□ -0.11
CCDC47-202ENST00000403162 Q8N2B8 174 aa14.36□□□□□ -0.11
CCDC47-202ENST00000403162 DNAJC30Q96LL9 226 aa14.36□□□□□ -0.11
CCDC47-202ENST00000403162 CUBNO60494 3623 aa14.36□□□□□ -0.11
CCDC47-202ENST00000403162 Q6ZSV7 163 aa14.35□□□□□ -0.11
CCDC47-202ENST00000403162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.34□□□□□ -0.11
CCDC47-202ENST00000403162 IGKV2-29A2NJV5 120 aaPredicted RBP14.34□□□□□ -0.11
CCDC47-202ENST00000403162 COX6CP09669 75 aa14.34□□□□□ -0.11
CCDC47-202ENST00000403162 LINC00467Q9BRT7 94 aa14.34□□□□□ -0.11
CCDC47-202ENST00000403162 IGHV3-53P01767 116 aa14.34□□□□□ -0.11
CCDC47-202ENST00000403162 TMEM61Q8N0U2 210 aa14.34□□□□□ -0.11
CCDC47-202ENST00000403162 TEX49A0A1B0GTD5 131 aa14.33□□□□□ -0.11
CCDC47-202ENST00000403162 A8MZ25 164 aa14.33□□□□□ -0.11
CCDC47-202ENST00000403162 PRM2P04554 102 aa14.33□□□□□ -0.11
CCDC47-202ENST00000403162 IFITM1P13164 125 aa14.33□□□□□ -0.11
CCDC47-202ENST00000403162 SLURP1P55000 103 aa14.33□□□□□ -0.12
CCDC47-202ENST00000403162 C11orf72Q8NBR9 251 aa14.33□□□□□ -0.12
CCDC47-202ENST00000403162 UBE2WQ96B02 151 aa14.33□□□□□ -0.12
CCDC47-202ENST00000403162 IGLV5-45A0A087WSX0 123 aa14.32□□□□□ -0.12
CCDC47-202ENST00000403162 H3BT86 120 aa14.32□□□□□ -0.12
CCDC47-202ENST00000403162 BEAN1Q3B7T3 259 aa14.32□□□□□ -0.12
CCDC47-202ENST00000403162 H7C423 109 aa14.32□□□□□ -0.12
CCDC47-202ENST00000403162 TIRAPP58753 221 aa14.32□□□□□ -0.12
CCDC47-202ENST00000403162 SNCGO76070 127 aa14.31□□□□□ -0.12
CCDC47-202ENST00000403162 C2orf82Q6UX34 121 aa14.31□□□□□ -0.12
CCDC47-202ENST00000403162 CLUHP3Q96NS8 147 aa14.31□□□□□ -0.12
CCDC47-202ENST00000403162 ANAPC13Q9BS18 74 aa14.31□□□□□ -0.12
CCDC47-202ENST00000403162 TRAV8-4A0A0B4J246 113 aa14.3□□□□□ -0.12
CCDC47-202ENST00000403162 NDUFA1O15239 70 aa14.3□□□□□ -0.12
CCDC47-202ENST00000403162 CDKN2A-AS1Q9UH64 79 aa14.3□□□□□ -0.12
CCDC47-202ENST00000403162 LST1O00453 97 aa14.29□□□□□ -0.12
CCDC47-202ENST00000403162 RS1O15537 224 aa14.29□□□□□ -0.12
CCDC47-202ENST00000403162 NPC2P61916 151 aa14.29□□□□□ -0.12
CCDC47-202ENST00000403162 DEFB136Q30KP8 78 aa14.29□□□□□ -0.12
CCDC47-202ENST00000403162 C18orf65Q6ZTR6 163 aa14.29□□□□□ -0.12
CCDC47-202ENST00000403162 IGHV3-38A0A0C4DH36 116 aa14.28□□□□□ -0.12
CCDC47-202ENST00000403162 GAGE2BQ13066 116 aa14.28□□□□□ -0.12
CCDC47-202ENST00000403162 GAGE2EQ4V326 116 aa14.28□□□□□ -0.12
CCDC47-202ENST00000403162 LINC01587Q99440 93 aa14.28□□□□□ -0.12
CCDC47-202ENST00000403162 MAP6D1Q9H9H5 199 aa14.28□□□□□ -0.12
CCDC47-202ENST00000403162 PEMTQ9UBM1 199 aa14.28□□□□□ -0.12
CCDC47-202ENST00000403162 GAGE2DQ9UEU5 116 aa14.28□□□□□ -0.12
CCDC47-202ENST00000403162 Q6Q795 121 aa14.27□□□□□ -0.12
CCDC47-202ENST00000403162 TMEM101Q96IK0 257 aa14.27□□□□□ -0.12
CCDC47-202ENST00000403162 TRAV4A0A0B4J268 109 aa14.27□□□□□ -0.13
CCDC47-202ENST00000403162 CLEC2BQ92478 149 aa14.27□□□□□ -0.13
CCDC47-202ENST00000403162 NF1P21359 2839 aa14.27□□□□□ -0.13
CCDC47-202ENST00000403162 C16orf95Q9H693 158 aa14.26□□□□□ -0.13
CCDC47-202ENST00000403162 INSP01308 110 aa14.26□□□□□ -0.13
CCDC47-202ENST00000403162 LINC01006Q8NI28 216 aa14.26□□□□□ -0.13
CCDC47-202ENST00000403162 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.25□□□□□ -0.13
CCDC47-202ENST00000403162 IGLV5-39A0A0G2JS06 123 aa14.24□□□□□ -0.13
CCDC47-202ENST00000403162 NDUFA7O95182 113 aa14.24□□□□□ -0.13
CCDC47-202ENST00000403162 CIRBPQ14011 172 aaKnown RBP14.24□□□□□ -0.13
CCDC47-202ENST00000403162 DEFB121Q5J5C9 76 aa14.24□□□□□ -0.13
CCDC47-202ENST00000403162 IGHV3OR16-12A0A075B7B8 117 aa14.23□□□□□ -0.13
CCDC47-202ENST00000403162 HERVK_113P63121 156 aa14.23□□□□□ -0.13
CCDC47-202ENST00000403162 DGAT2L7PQ6IED9 249 aa14.23□□□□□ -0.13
CCDC47-202ENST00000403162 MAST4O15021 2626 aa14.23□□□□□ -0.13
CCDC47-202ENST00000403162 NHLRC4P0CG21 123 aaPredicted RBP14.23□□□□□ -0.13
CCDC47-202ENST00000403162 MRPL23Q16540 153 aaKnown RBP14.23□□□□□ -0.13
CCDC47-202ENST00000403162 FAM19A3Q7Z5A8 133 aa14.23□□□□□ -0.13
CCDC47-202ENST00000403162 DAND5Q8N907 189 aa14.23□□□□□ -0.13
CCDC47-202ENST00000403162 C4orf3Q8WVX3 66 aa14.23□□□□□ -0.13
CCDC47-202ENST00000403162 CITED2Q99967 270 aaPredicted RBP14.23□□□□□ -0.13
CCDC47-202ENST00000403162 FAM240AA0A1B0GVK7 77 aa14.22□□□□□ -0.13
CCDC47-202ENST00000403162 COX6A2Q02221 97 aa14.22□□□□□ -0.13
CCDC47-202ENST00000403162 NDUFV3P56181 108 aaKnown RBP14.22□□□□□ -0.13
CCDC47-202ENST00000403162 C15orf53Q8NAA6 179 aa14.22□□□□□ -0.13
CCDC47-202ENST00000403162 LINC00308Q8TCZ7 52 aa14.22□□□□□ -0.13
CCDC47-202ENST00000403162 DYNLRB2Q8TF09 96 aa14.22□□□□□ -0.13
CCDC47-202ENST00000403162 LINC00242Q5T6M2 205 aa14.21□□□□□ -0.13
CCDC47-202ENST00000403162 DEFB114Q30KQ6 69 aa14.2□□□□□ -0.14
CCDC47-202ENST00000403162 Q9H8V8 135 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms