RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 ZNF815PA8K554 130 aa8.63□□□□□ -1.03
CLIP4-203ENST00000401617 LEPROTO15243 131 aa8.63□□□□□ -1.03
CLIP4-203ENST00000401617 IGHV4-30-4P0DP06 118 aa8.63□□□□□ -1.03
CLIP4-203ENST00000401617 UBE2D1P51668 147 aa8.63□□□□□ -1.03
CLIP4-203ENST00000401617 RNASE13Q5GAN3 156 aaKnown RBP8.63□□□□□ -1.03
CLIP4-203ENST00000401617 SHISA2Q6UWI4 295 aa8.63□□□□□ -1.03
CLIP4-203ENST00000401617 PRIMA1Q86XR5 153 aa8.63□□□□□ -1.03
CLIP4-203ENST00000401617 CEND1Q8N111 149 aa8.63□□□□□ -1.03
CLIP4-203ENST00000401617 H7C423 109 aa8.63□□□□□ -1.03
CLIP4-203ENST00000401617 FAM19A3Q7Z5A8 133 aa8.63□□□□□ -1.03
CLIP4-203ENST00000401617 RNF183Q96D59 192 aa8.63□□□□□ -1.03
CLIP4-203ENST00000401617 FBN1P35555 2871 aaKnown RBP8.62□□□□□ -1.03
CLIP4-203ENST00000401617 J3QQQ9 107 aa8.62□□□□□ -1.03
CLIP4-203ENST00000401617 FXYD2P54710 66 aa8.62□□□□□ -1.03
CLIP4-203ENST00000401617 EGFEM1PQ0D2K5 195 aa8.62□□□□□ -1.03
CLIP4-203ENST00000401617 SMAGPQ0VAQ4 97 aa8.62□□□□□ -1.03
CLIP4-203ENST00000401617 FAM222AQ5U5X8 452 aa8.62□□□□□ -1.03
CLIP4-203ENST00000401617 Q8NAQ8 132 aa8.62□□□□□ -1.03
CLIP4-203ENST00000401617 IGHV4-28A0A0C4DH34 117 aa8.62□□□□□ -1.03
CLIP4-203ENST00000401617 H3BRM9 83 aa8.62□□□□□ -1.03
CLIP4-203ENST00000401617 MIFP14174 115 aa8.62□□□□□ -1.03
CLIP4-203ENST00000401617 TIRAPP58753 221 aa8.62□□□□□ -1.03
CLIP4-203ENST00000401617 DGAT2L7PQ6IED9 249 aa8.62□□□□□ -1.03
CLIP4-203ENST00000401617 C3orf56Q8N813 242 aa8.62□□□□□ -1.03
CLIP4-203ENST00000401617 TMEM243Q9BU79 118 aa8.62□□□□□ -1.03
CLIP4-203ENST00000401617 STAB1Q9NY15 2570 aa8.61□□□□□ -1.03
CLIP4-203ENST00000401617 IGLV5-45A0A087WSX0 123 aa8.61□□□□□ -1.03
CLIP4-203ENST00000401617 GCSHP23434 173 aa8.61□□□□□ -1.03
CLIP4-203ENST00000401617 KRTAP10-11P60412 298 aa8.61□□□□□ -1.03
CLIP4-203ENST00000401617 OXLD1Q5BKU9 147 aa8.61□□□□□ -1.03
CLIP4-203ENST00000401617 PLEKHB2Q96CS7 222 aa8.61□□□□□ -1.03
CLIP4-203ENST00000401617 DNAH3Q8TD57 4116 aa8.61□□□□□ -1.03
CLIP4-203ENST00000401617 A8MZ25 164 aa8.61□□□□□ -1.03
CLIP4-203ENST00000401617 CDC42SE2Q9NRR3 84 aa8.61□□□□□ -1.03
CLIP4-203ENST00000401617 A0A0J9YY99 117 aa8.6□□□□□ -1.03
CLIP4-203ENST00000401617 K7EP13 123 aa8.6□□□□□ -1.03
CLIP4-203ENST00000401617 OR5A1Q8NGJ0 315 aa8.6□□□□□ -1.03
CLIP4-203ENST00000401617 PRO0255Q9UI72 69 aa8.6□□□□□ -1.03
CLIP4-203ENST00000401617 TRBV6-8A0A0A6YYG3 113 aa8.59□□□□□ -1.03
CLIP4-203ENST00000401617 LGALS3P17931 250 aaKnown RBP8.59□□□□□ -1.03
CLIP4-203ENST00000401617 HIST1H4GQ99525 98 aa8.59□□□□□ -1.03
CLIP4-203ENST00000401617 SPANXB1Q9NS25 103 aaPredicted RBP8.59□□□□□ -1.03
CLIP4-203ENST00000401617 IGHV1-58A0A0C4DH39 117 aa8.58□□□□□ -1.04
CLIP4-203ENST00000401617 C9orf118A6NHY6 69 aa8.58□□□□□ -1.04
CLIP4-203ENST00000401617 IGHV3-30-3P0DP02 117 aa8.58□□□□□ -1.04
CLIP4-203ENST00000401617 GYPEP15421 78 aa8.58□□□□□ -1.04
CLIP4-203ENST00000401617 SCGB1D4Q6XE38 83 aa8.58□□□□□ -1.04
CLIP4-203ENST00000401617 SMIM13P0DJ93 91 aa8.58□□□□□ -1.04
CLIP4-203ENST00000401617 LINC00242Q5T6M2 205 aa8.58□□□□□ -1.04
CLIP4-203ENST00000401617 VSIG2Q96IQ7 327 aa8.58□□□□□ -1.04
CLIP4-203ENST00000401617 GEMIN7Q9H840 131 aaKnown RBP8.58□□□□□ -1.04
CLIP4-203ENST00000401617 UBE2L6O14933 153 aa8.57□□□□□ -1.04
CLIP4-203ENST00000401617 DEFB4AO15263 64 aa8.57□□□□□ -1.04
CLIP4-203ENST00000401617 COX6A2Q02221 97 aa8.57□□□□□ -1.04
CLIP4-203ENST00000401617 ATP6V0E2Q8NHE4 81 aa8.57□□□□□ -1.04
CLIP4-203ENST00000401617 TRAV8-3A0A0A6YYJ7 113 aa8.56□□□□□ -1.04
CLIP4-203ENST00000401617 A0A1B0GWB2 263 aa8.56□□□□□ -1.04
CLIP4-203ENST00000401617 PTTG1IPP53801 180 aa8.56□□□□□ -1.04
CLIP4-203ENST00000401617 HERVK_113P63121 156 aa8.56□□□□□ -1.04
CLIP4-203ENST00000401617 CDKN2A-AS1Q9UH64 79 aa8.56□□□□□ -1.04
CLIP4-203ENST00000401617 CELA1Q9UNI1 258 aa8.56□□□□□ -1.04
CLIP4-203ENST00000401617 IGHV3-64A0A075B6Q5 118 aa8.56□□□□□ -1.04
CLIP4-203ENST00000401617 DAD1P61803 113 aa8.56□□□□□ -1.04
CLIP4-203ENST00000401617 UBE2V1Q13404 147 aa8.56□□□□□ -1.04
CLIP4-203ENST00000401617 AMMECR1LQ6DCA0 310 aa8.56□□□□□ -1.04
CLIP4-203ENST00000401617 TMEM101Q96IK0 257 aa8.56□□□□□ -1.04
CLIP4-203ENST00000401617 MAST4O15021 2626 aa8.55□□□□□ -1.04
CLIP4-203ENST00000401617 PAX4O43316 350 aa8.55□□□□□ -1.04
CLIP4-203ENST00000401617 SPART-AS1P0CW21 52 aa8.55□□□□□ -1.04
CLIP4-203ENST00000401617 C10orf126Q8N4M7 172 aa8.55□□□□□ -1.04
CLIP4-203ENST00000401617 NHP2Q9NX24 153 aaKnown RBP8.55□□□□□ -1.04
CLIP4-203ENST00000401617 IGLV5-39A0A0G2JS06 123 aa8.54□□□□□ -1.04
CLIP4-203ENST00000401617 SPINK8P0C7L1 97 aa8.54□□□□□ -1.04
CLIP4-203ENST00000401617 GAGE6Q13070 117 aa8.54□□□□□ -1.04
CLIP4-203ENST00000401617 VAMP3Q15836 100 aa8.54□□□□□ -1.04
CLIP4-203ENST00000401617 C12orf74Q32Q52 190 aa8.54□□□□□ -1.04
CLIP4-203ENST00000401617 CCL25O15444 150 aa8.54□□□□□ -1.04
CLIP4-203ENST00000401617 IGHV3-30P01768 117 aa8.54□□□□□ -1.04
CLIP4-203ENST00000401617 ATP5G1P05496 136 aa8.54□□□□□ -1.04
CLIP4-203ENST00000401617 IGHV3-30-5P0DP03 117 aa8.54□□□□□ -1.04
CLIP4-203ENST00000401617 SRSF9Q13242 221 aaKnown RBP eCLIP8.54□□□□□ -1.04
CLIP4-203ENST00000401617 ZFAND6Q6FIF0 208 aa8.54□□□□□ -1.04
CLIP4-203ENST00000401617 PKD1L1Q8TDX9 2849 aa8.54□□□□□ -1.04
CLIP4-203ENST00000401617 IGLV4-60A0A075B6I1 120 aa8.53□□□□□ -1.04
CLIP4-203ENST00000401617 TRAV13-1A0A0B4J241 112 aa8.53□□□□□ -1.04
CLIP4-203ENST00000401617 RAB37Q96AX2 223 aa8.53□□□□□ -1.04
CLIP4-203ENST00000401617 CHCHD5Q9BSY4 110 aa8.53□□□□□ -1.04
CLIP4-203ENST00000401617 A0A0J9YXY3 114 aa8.52□□□□□ -1.04
CLIP4-203ENST00000401617 F5H768 121 aa8.52□□□□□ -1.04
CLIP4-203ENST00000401617 H3BUT2 72 aa8.52□□□□□ -1.04
CLIP4-203ENST00000401617 K7ERJ3 54 aa8.52□□□□□ -1.04
CLIP4-203ENST00000401617 ANK2Q01484 3957 aa8.52□□□□□ -1.04
CLIP4-203ENST00000401617 COL6A5A8TX70 2615 aa8.52□□□□□ -1.05
CLIP4-203ENST00000401617 A0A1B0GUV1 79 aa8.52□□□□□ -1.05
CLIP4-203ENST00000401617 TEX48A0A1B0GUV7 120 aa8.52□□□□□ -1.05
CLIP4-203ENST00000401617 NDUFA12Q9UI09 145 aa8.52□□□□□ -1.05
CLIP4-203ENST00000401617 TRAV26-1A0A087WT03 109 aa8.51□□□□□ -1.05
CLIP4-203ENST00000401617 TMEM238LA0A1B0GVL6 79 aa8.51□□□□□ -1.05
CLIP4-203ENST00000401617 A6NJY4 79 aa8.51□□□□□ -1.05
CLIP4-203ENST00000401617 SMIM1B2RUZ4 78 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms