RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 HIGD1BQ9P298 99 aa10.24□□□□□ -0.77
SCAF4-202ENST00000399804 IGLV4-3A0A075B6K6 122 aa10.24□□□□□ -0.77
SCAF4-202ENST00000399804 PRO1854Q9UHT4 67 aa10.24□□□□□ -0.77
SCAF4-202ENST00000399804 IGLV10-54A0A075B6I4 117 aa10.23□□□□□ -0.77
SCAF4-202ENST00000399804 A0A1W2PPM0 123 aa10.23□□□□□ -0.77
SCAF4-202ENST00000399804 TSHBP01222 138 aa10.23□□□□□ -0.77
SCAF4-202ENST00000399804 RPL32P62910 135 aaKnown RBP10.23□□□□□ -0.77
SCAF4-202ENST00000399804 C1orf158Q8N1D5 194 aa10.23□□□□□ -0.77
SCAF4-202ENST00000399804 VSIG2Q96IQ7 327 aa10.23□□□□□ -0.77
SCAF4-202ENST00000399804 UNC79Q9P2D8 2635 aa10.23□□□□□ -0.77
SCAF4-202ENST00000399804 K7EP34 96 aa10.22□□□□□ -0.77
SCAF4-202ENST00000399804 NXPH4O95158 308 aa10.22□□□□□ -0.77
SCAF4-202ENST00000399804 SMIM9A6NGZ8 99 aa10.21□□□□□ -0.77
SCAF4-202ENST00000399804 IGHV3-30-3P0DP02 117 aa10.21□□□□□ -0.78
SCAF4-202ENST00000399804 MAPKAPK5-AS1Q8N8E1 139 aa10.21□□□□□ -0.78
SCAF4-202ENST00000399804 UBE2WQ96B02 151 aa10.21□□□□□ -0.78
SCAF4-202ENST00000399804 ICOSQ9Y6W8 199 aa10.21□□□□□ -0.78
SCAF4-202ENST00000399804 TEX48A0A1B0GUV7 120 aa10.2□□□□□ -0.78
SCAF4-202ENST00000399804 S100A7L2Q5SY68 101 aa10.2□□□□□ -0.78
SCAF4-202ENST00000399804 TEP1Q99973 2627 aaKnown RBP10.2□□□□□ -0.78
SCAF4-202ENST00000399804 TRAV26-1A0A087WT03 109 aa10.19□□□□□ -0.78
SCAF4-202ENST00000399804 A4D1N5 150 aa10.19□□□□□ -0.78
SCAF4-202ENST00000399804 H3BMG7 143 aa10.19□□□□□ -0.78
SCAF4-202ENST00000399804 OXLD1Q5BKU9 147 aa10.19□□□□□ -0.78
SCAF4-202ENST00000399804 DPH3Q96FX2 82 aa10.19□□□□□ -0.78
SCAF4-202ENST00000399804 UBE2DNLQ8IWF7 75 aa10.19□□□□□ -0.78
SCAF4-202ENST00000399804 FAM19A4Q96LR4 140 aa10.19□□□□□ -0.78
SCAF4-202ENST00000399804 ETDBQ3ZM63 59 aa10.19□□□□□ -0.78
SCAF4-202ENST00000399804 MUSTN1Q8IVN3 82 aa10.19□□□□□ -0.78
SCAF4-202ENST00000399804 DAND5Q8N907 189 aa10.19□□□□□ -0.78
SCAF4-202ENST00000399804 CDKN2A-AS1Q9UH64 79 aa10.19□□□□□ -0.78
SCAF4-202ENST00000399804 TEX15Q9BXT5 2789 aa10.19□□□□□ -0.78
SCAF4-202ENST00000399804 IGLV2-18A0A075B6J9 118 aa10.18□□□□□ -0.78
SCAF4-202ENST00000399804 IGHV1-58A0A0C4DH39 117 aa10.18□□□□□ -0.78
SCAF4-202ENST00000399804 ZMAT4Q9H898 229 aa10.18□□□□□ -0.78
SCAF4-202ENST00000399804 LOC100131303A0A0U1RQF7 123 aa10.18□□□□□ -0.78
SCAF4-202ENST00000399804 TRBV6-4A0A1B0GX49 114 aa10.18□□□□□ -0.78
SCAF4-202ENST00000399804 C9JAW5 83 aa10.18□□□□□ -0.78
SCAF4-202ENST00000399804 ZNF22P17026 224 aaPredicted RBP10.18□□□□□ -0.78
SCAF4-202ENST00000399804 RBMY1FQ15415 496 aaKnown RBP10.18□□□□□ -0.78
SCAF4-202ENST00000399804 SHISA2Q6UWI4 295 aa10.18□□□□□ -0.78
SCAF4-202ENST00000399804 ZNF561-AS1K7EIQ3 104 aa10.18□□□□□ -0.78
SCAF4-202ENST00000399804 PIK3CD-AS1Q5SR53 167 aa10.18□□□□□ -0.78
SCAF4-202ENST00000399804 LYRM9A8MSI8 78 aa10.17□□□□□ -0.78
SCAF4-202ENST00000399804 PRSS47A8MTI9 375 aa10.17□□□□□ -0.78
SCAF4-202ENST00000399804 IGLL5B9A064 214 aa10.17□□□□□ -0.78
SCAF4-202ENST00000399804 SH2D6Q7Z4S9 175 aa10.17□□□□□ -0.78
SCAF4-202ENST00000399804 MUC4Q99102 2169 aa10.16□□□□□ -0.78
SCAF4-202ENST00000399804 IGIPA6NJ69 53 aa10.16□□□□□ -0.78
SCAF4-202ENST00000399804 IGHV3-30P01768 117 aa10.16□□□□□ -0.78
SCAF4-202ENST00000399804 IGHV3-33P01772 117 aa10.16□□□□□ -0.78
SCAF4-202ENST00000399804 IGHV3-30-5P0DP03 117 aa10.16□□□□□ -0.78
SCAF4-202ENST00000399804 ATXN8Q156A1 80 aa10.16□□□□□ -0.78
SCAF4-202ENST00000399804 KIF25-AS1Q9Y6Z4 181 aa10.16□□□□□ -0.78
SCAF4-202ENST00000399804 FAM110AQ9BQ89 295 aa10.16□□□□□ -0.78
SCAF4-202ENST00000399804 FHL3Q13643 280 aa10.16□□□□□ -0.78
SCAF4-202ENST00000399804 CFC1BP0CG36 223 aa10.15□□□□□ -0.78
SCAF4-202ENST00000399804 CFC1P0CG37 223 aa10.15□□□□□ -0.78
SCAF4-202ENST00000399804 PYGO1Q9Y3Y4 419 aa10.15□□□□□ -0.78
SCAF4-202ENST00000399804 IGHV4-28A0A0C4DH34 117 aa10.15□□□□□ -0.78
SCAF4-202ENST00000399804 TINCRA0A1B0GVN0 87 aa10.15□□□□□ -0.78
SCAF4-202ENST00000399804 WFDC2Q14508 124 aa10.15□□□□□ -0.78
SCAF4-202ENST00000399804 KRTAP1-3Q8IUG1 177 aa10.15□□□□□ -0.78
SCAF4-202ENST00000399804 MAST4O15021 2626 aa10.15□□□□□ -0.79
SCAF4-202ENST00000399804 TRBV20-1A0A075B6N2 111 aa10.14□□□□□ -0.79
SCAF4-202ENST00000399804 G3V4G9 280 aa10.14□□□□□ -0.79
SCAF4-202ENST00000399804 KLK12Q9UKR0 248 aa10.14□□□□□ -0.79
SCAF4-202ENST00000399804 C2orf82Q6UX34 121 aa10.14□□□□□ -0.79
SCAF4-202ENST00000399804 TRBV6-8A0A0A6YYG3 113 aa10.14□□□□□ -0.79
SCAF4-202ENST00000399804 Q6ZSN1 163 aa10.14□□□□□ -0.79
SCAF4-202ENST00000399804 MGAM2Q2M2H8 2515 aa10.14□□□□□ -0.79
SCAF4-202ENST00000399804 MIFP14174 115 aa10.14□□□□□ -0.79
SCAF4-202ENST00000399804 SIGMAR1Q99720 223 aa10.14□□□□□ -0.79
SCAF4-202ENST00000399804 CRYBA4P53673 196 aa10.13□□□□□ -0.79
SCAF4-202ENST00000399804 HERV-K104P63124 156 aa10.13□□□□□ -0.79
SCAF4-202ENST00000399804 COX7A2LO14548 114 aa10.13□□□□□ -0.79
SCAF4-202ENST00000399804 COX7B2Q8TF08 81 aa10.13□□□□□ -0.79
SCAF4-202ENST00000399804 Q9HAA7 133 aa10.13□□□□□ -0.79
SCAF4-202ENST00000399804 LINC00315P59091 139 aa10.13□□□□□ -0.79
SCAF4-202ENST00000399804 KIR2DL5BQ8NHK3 375 aa10.13□□□□□ -0.79
SCAF4-202ENST00000399804 TMEM223A0PJW6 202 aa10.12□□□□□ -0.79
SCAF4-202ENST00000399804 IGHV4-30-4P0DP06 118 aa10.12□□□□□ -0.79
SCAF4-202ENST00000399804 UBE2D4Q9Y2X8 147 aa10.12□□□□□ -0.79
SCAF4-202ENST00000399804 IGKV2D-24A0A075B6R9 120 aa10.12□□□□□ -0.79
SCAF4-202ENST00000399804 A8MZ25 164 aa10.11□□□□□ -0.79
SCAF4-202ENST00000399804 A0A0J9YXY3 114 aa10.11□□□□□ -0.79
SCAF4-202ENST00000399804 IFITM1P13164 125 aa10.11□□□□□ -0.79
SCAF4-202ENST00000399804 PSCAO43653 123 aa10.11□□□□□ -0.79
SCAF4-202ENST00000399804 UFSP1Q6NVU6 142 aa10.11□□□□□ -0.79
SCAF4-202ENST00000399804 C10orf126Q8N4M7 172 aa10.11□□□□□ -0.79
SCAF4-202ENST00000399804 BEAN1Q3B7T3 259 aa10.1□□□□□ -0.79
SCAF4-202ENST00000399804 CSMD1Q96PZ7 3565 aa10.1□□□□□ -0.79
SCAF4-202ENST00000399804 GCN1Q92616 2671 aaKnown RBP10.1□□□□□ -0.79
SCAF4-202ENST00000399804 SLC25A20O43772 301 aa10.1□□□□□ -0.79
SCAF4-202ENST00000399804 LINC00269Q8N2A0 174 aa10.1□□□□□ -0.79
SCAF4-202ENST00000399804 UBE2D3P61077 147 aa10.1□□□□□ -0.79
SCAF4-202ENST00000399804 UBE2D2P62837 147 aa10.1□□□□□ -0.79
SCAF4-202ENST00000399804 NFE4Q86UQ8 179 aa10.09□□□□□ -0.79
SCAF4-202ENST00000399804 TM2D2Q9BX73 214 aa10.09□□□□□ -0.79
SCAF4-202ENST00000399804 ITPR1Q14643 2758 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms