RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 M0QXV9 152 aa5.8□□□□□ -1.48
USP47-203ENST00000399455 ODF3L2Q3SX64 289 aa5.8□□□□□ -1.48
USP47-203ENST00000399455 PLA2G2EQ9NZK7 142 aa5.8□□□□□ -1.48
USP47-203ENST00000399455 A0A0B4J2C4 111 aa5.79□□□□□ -1.48
USP47-203ENST00000399455 MDFIQ99750 246 aa5.79□□□□□ -1.48
USP47-203ENST00000399455 POM121L12Q8N7R1 296 aa5.79□□□□□ -1.48
USP47-203ENST00000399455 LOC100131303A0A0U1RQF7 123 aa5.79□□□□□ -1.48
USP47-203ENST00000399455 C10orf25Q5T742 122 aa5.79□□□□□ -1.48
USP47-203ENST00000399455 PYGO1Q9Y3Y4 419 aa5.79□□□□□ -1.48
USP47-203ENST00000399455 IGLV9-49A0A0B4J1Y8 123 aa5.79□□□□□ -1.48
USP47-203ENST00000399455 MRPS36P82909 103 aaKnown RBP5.79□□□□□ -1.48
USP47-203ENST00000399455 UBE2V1Q13404 147 aa5.79□□□□□ -1.48
USP47-203ENST00000399455 SMIM20Q8N5G0 67 aa5.79□□□□□ -1.48
USP47-203ENST00000399455 SPATA3Q8NHX4 192 aa5.79□□□□□ -1.48
USP47-203ENST00000399455 MLST8Q9BVC4 326 aa5.79□□□□□ -1.48
USP47-203ENST00000399455 OTOGLQ3ZCN5 2332 aa5.79□□□□□ -1.48
USP47-203ENST00000399455 KIAA1549Q9HCM3 1950 aa5.79□□□□□ -1.48
USP47-203ENST00000399455 TRBV6-5A0A0K0K1A5 114 aa5.78□□□□□ -1.48
USP47-203ENST00000399455 REG3GQ6UW15 175 aa5.78□□□□□ -1.48
USP47-203ENST00000399455 EML5Q05BV3 1969 aa5.78□□□□□ -1.48
USP47-203ENST00000399455 IGLV4-3A0A075B6K6 122 aa5.78□□□□□ -1.48
USP47-203ENST00000399455 CREBBPQ92793 2442 aa5.78□□□□□ -1.48
USP47-203ENST00000399455 IGKV2-28A0A075B6P5 120 aa5.78□□□□□ -1.48
USP47-203ENST00000399455 IGKV2D-28P01615 120 aa5.78□□□□□ -1.48
USP47-203ENST00000399455 BRWD1-AS2P59051 145 aa5.78□□□□□ -1.48
USP47-203ENST00000399455 HRCT1Q6UXD1 115 aa5.78□□□□□ -1.48
USP47-203ENST00000399455 WFDC9Q8NEX5 89 aa5.78□□□□□ -1.48
USP47-203ENST00000399455 A0A1W2PPR1 153 aa5.77□□□□□ -1.49
USP47-203ENST00000399455 PTPRBP23467 1997 aa5.77□□□□□ -1.49
USP47-203ENST00000399455 C11orf1Q9H5F2 150 aa5.77□□□□□ -1.49
USP47-203ENST00000399455 XAGE1AQ9HD64 81 aa5.77□□□□□ -1.49
USP47-203ENST00000399455 HIGD1BQ9P298 99 aa5.77□□□□□ -1.49
USP47-203ENST00000399455 TMEM223A0PJW6 202 aa5.77□□□□□ -1.49
USP47-203ENST00000399455 C3orf84H3BNL1 204 aa5.77□□□□□ -1.49
USP47-203ENST00000399455 C1orf137Q5JT78 98 aa5.77□□□□□ -1.49
USP47-203ENST00000399455 PTPRQQ9UMZ3 2332 aa5.77□□□□□ -1.49
USP47-203ENST00000399455 LINC00337Q8N6G1 96 aa5.77□□□□□ -1.49
USP47-203ENST00000399455 A0A0J9YXY3 114 aa5.77□□□□□ -1.49
USP47-203ENST00000399455 C6orf223Q8N319 242 aa5.77□□□□□ -1.49
USP47-203ENST00000399455 PPDPFQ9H3Y8 114 aa5.76□□□□□ -1.49
USP47-203ENST00000399455 ATG2AQ2TAZ0 1938 aa5.76□□□□□ -1.49
USP47-203ENST00000399455 BPY2O14599 106 aa5.76□□□□□ -1.49
USP47-203ENST00000399455 PYY3Q5JQD4 70 aa5.76□□□□□ -1.49
USP47-203ENST00000399455 IGLV2-8P01709 118 aa5.76□□□□□ -1.49
USP47-203ENST00000399455 Q8IZM0 81 aa5.76□□□□□ -1.49
USP47-203ENST00000399455 NTN5Q8WTR8 489 aaPredicted RBP5.76□□□□□ -1.49
USP47-203ENST00000399455 LIMD2Q9BT23 127 aa5.76□□□□□ -1.49
USP47-203ENST00000399455 TMEM258P61165 79 aa5.76□□□□□ -1.49
USP47-203ENST00000399455 USP17L23D6RBM5 183 aa5.76□□□□□ -1.49
USP47-203ENST00000399455 PLA2G1BP04054 148 aaKnown RBP5.76□□□□□ -1.49
USP47-203ENST00000399455 FAM236DA0A1B0GTK5 79 aa5.76□□□□□ -1.49
USP47-203ENST00000399455 FAM236CP0DP71 79 aa5.76□□□□□ -1.49
USP47-203ENST00000399455 IGLV2-11P01706 119 aa5.75□□□□□ -1.49
USP47-203ENST00000399455 LINC01556Q5JQF7 62 aa5.75□□□□□ -1.49
USP47-203ENST00000399455 RPL37AP8A6NKH3 93 aa5.75□□□□□ -1.49
USP47-203ENST00000399455 EGFEM1PQ0D2K5 195 aa5.75□□□□□ -1.49
USP47-203ENST00000399455 SPINK6Q6UWN8 80 aa5.75□□□□□ -1.49
USP47-203ENST00000399455 ROS1P08922 2347 aa5.75□□□□□ -1.49
USP47-203ENST00000399455 TRBV27A0A0K0K1C4 114 aa5.75□□□□□ -1.49
USP47-203ENST00000399455 TSHBP01222 138 aa5.75□□□□□ -1.49
USP47-203ENST00000399455 CIRBP-AS1Q8TBR5 109 aa5.75□□□□□ -1.49
USP47-203ENST00000399455 CDKN2A-AS1Q9UH64 79 aa5.75□□□□□ -1.49
USP47-203ENST00000399455 H3BMG7 143 aa5.74□□□□□ -1.49
USP47-203ENST00000399455 LOC105371267A0A1B0GV96 52 aa5.74□□□□□ -1.49
USP47-203ENST00000399455 J3QL48 77 aa5.74□□□□□ -1.49
USP47-203ENST00000399455 RNASE3P12724 160 aaKnown RBP5.74□□□□□ -1.49
USP47-203ENST00000399455 CDPF1Q6NVV7 123 aa5.74□□□□□ -1.49
USP47-203ENST00000399455 FHL2Q14192 279 aa5.74□□□□□ -1.49
USP47-203ENST00000399455 FAM208BQ5VWN6 2430 aa5.74□□□□□ -1.49
USP47-203ENST00000399455 LYPD5Q6UWN5 251 aa5.74□□□□□ -1.49
USP47-203ENST00000399455 FOXI1Q12951 378 aa5.74□□□□□ -1.49
USP47-203ENST00000399455 CRIP3Q6Q6R5 217 aa5.74□□□□□ -1.49
USP47-203ENST00000399455 FREM1Q5H8C1 2179 aa5.73□□□□□ -1.49
USP47-203ENST00000399455 ABCA1O95477 2261 aa5.73□□□□□ -1.49
USP47-203ENST00000399455 DLEU1O43261 78 aa5.73□□□□□ -1.49
USP47-203ENST00000399455 TIMM17BO60830 172 aa5.73□□□□□ -1.49
USP47-203ENST00000399455 A0A1B0GXF2 115 aa5.73□□□□□ -1.49
USP47-203ENST00000399455 C16orf90A8MZG2 172 aa5.73□□□□□ -1.49
USP47-203ENST00000399455 SPTSSBQ8NFR3 76 aa5.73□□□□□ -1.49
USP47-203ENST00000399455 EXPH5Q8NEV8 1989 aa5.73□□□□□ -1.49
USP47-203ENST00000399455 Q6ZPA2 131 aa5.72□□□□□ -1.49
USP47-203ENST00000399455 CLEC2BQ92478 149 aa5.72□□□□□ -1.49
USP47-203ENST00000399455 PTH2Q96A98 100 aa5.72□□□□□ -1.49
USP47-203ENST00000399455 C2orf48Q96LS8 159 aa5.72□□□□□ -1.49
USP47-203ENST00000399455 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.72□□□□□ -1.499e-7■■■■■ 30.7
USP47-203ENST00000399455 BEAN1Q3B7T3 259 aa5.72□□□□□ -1.49
USP47-203ENST00000399455 RNASE8Q8TDE3 154 aaKnown RBP5.72□□□□□ -1.49
USP47-203ENST00000399455 H3BT86 120 aa5.72□□□□□ -1.49
USP47-203ENST00000399455 ZNF22P17026 224 aaPredicted RBP5.72□□□□□ -1.49
USP47-203ENST00000399455 CYSRT1A8MQ03 144 aa5.71□□□□□ -1.49
USP47-203ENST00000399455 LINC00308Q8TCZ7 52 aa5.71□□□□□ -1.5
USP47-203ENST00000399455 K7ERS5 55 aa5.71□□□□□ -1.5
USP47-203ENST00000399455 PRR9Q5T870 116 aa5.71□□□□□ -1.5
USP47-203ENST00000399455 C1orf158Q8N1D5 194 aa5.71□□□□□ -1.5
USP47-203ENST00000399455 CDC42SE2Q9NRR3 84 aa5.71□□□□□ -1.5
USP47-203ENST00000399455 EDN2P20800 178 aa5.7□□□□□ -1.5
USP47-203ENST00000399455 ZNF73O43830 326 aaPredicted RBP5.7□□□□□ -1.5
USP47-203ENST00000399455 CRIP1P50238 77 aa5.7□□□□□ -1.5
USP47-203ENST00000399455 LINC00173Q6ZV60 143 aa5.7□□□□□ -1.5
USP47-203ENST00000399455 RNF185Q96GF1 192 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms