RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 SPATA25Q9BR10 227 aa4.8□□□□□ -1.64
CX3CR1-202ENST00000399220 SPANXB1Q9NS25 103 aaPredicted RBP4.8□□□□□ -1.64
CX3CR1-202ENST00000399220 PRO0255Q9UI72 69 aa4.8□□□□□ -1.64
CX3CR1-202ENST00000399220 IGHV3-73A0A0B4J1V6 119 aa4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 GAGE10A6NGK3 116 aa4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 F8W1H4 67 aa4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 GAGE7O76087 117 aa4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 GAGE12FP0CL80 117 aa4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 GAGE12GP0CL81 117 aa4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 GAGE12IP0CL82 117 aa4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 SH2D6Q7Z4S9 175 aa4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 OR11H2Q8NH07 326 aa4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 TRGV2A0A075B6R0 118 aa4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 SMIM13P0DJ93 91 aa4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 UBE2D1P51668 147 aa4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 ZNRF2Q8NHG8 242 aa4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 TEP1Q99973 2627 aaKnown RBP4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 MTORP42345 2549 aa4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 FXYD2P54710 66 aa4.79□□□□□ -1.64
CX3CR1-202ENST00000399220 TENM1Q9UKZ4 2725 aa4.78□□□□□ -1.64
CX3CR1-202ENST00000399220 FBN1P35555 2871 aaKnown RBP4.78□□□□□ -1.64
CX3CR1-202ENST00000399220 ZC2HC1BQ5TFG8 222 aa4.78□□□□□ -1.64
CX3CR1-202ENST00000399220 FAM222AQ5U5X8 452 aa4.78□□□□□ -1.64
CX3CR1-202ENST00000399220 DYNC2H1Q8NCM8 4307 aaKnown RBP4.78□□□□□ -1.64
CX3CR1-202ENST00000399220 A0A1B0GUV1 79 aa4.78□□□□□ -1.64
CX3CR1-202ENST00000399220 TMEM223A0PJW6 202 aa4.78□□□□□ -1.64
CX3CR1-202ENST00000399220 IGLL5B9A064 214 aa4.78□□□□□ -1.64
CX3CR1-202ENST00000399220 SPART-AS1P0CW21 52 aa4.78□□□□□ -1.64
CX3CR1-202ENST00000399220 DEFB135Q30KP9 77 aa4.78□□□□□ -1.64
CX3CR1-202ENST00000399220 TRBV6-8A0A0A6YYG3 113 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 TRGV4A0A0C4DH28 118 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 LINC01561Q8N1V8 128 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 TM2D3Q9BRN9 247 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 PPDPFQ9H3Y8 114 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 CDC42SE2Q9NRR3 84 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 FABP2P12104 132 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 VCX2Q9H322 139 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 SORL1Q92673 2214 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 F8P00451 2351 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 TRRAPQ9Y4A5 3859 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 ATP5G1P05496 136 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 ZNF22P17026 224 aaPredicted RBP4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 MAPKAPK5-AS1Q8N8E1 139 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 VSIG2Q96IQ7 327 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 TMEM243Q9BU79 118 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 SPCS1Q9Y6A9 102 aa4.77□□□□□ -1.65
CX3CR1-202ENST00000399220 H3BUT2 72 aa4.76□□□□□ -1.65
CX3CR1-202ENST00000399220 LEPROTO15243 131 aa4.76□□□□□ -1.65
CX3CR1-202ENST00000399220 HERVK_113P61574 105 aa4.76□□□□□ -1.65
CX3CR1-202ENST00000399220 KRTAP21-3Q3LHN1 58 aa4.76□□□□□ -1.65
CX3CR1-202ENST00000399220 VWFP04275 2813 aa4.76□□□□□ -1.65
CX3CR1-202ENST00000399220 MYMXA0A1B0GTQ4 84 aa4.76□□□□□ -1.65
CX3CR1-202ENST00000399220 H0Y8G0 127 aa4.76□□□□□ -1.65
CX3CR1-202ENST00000399220 C12orf74Q32Q52 190 aa4.76□□□□□ -1.65
CX3CR1-202ENST00000399220 NOTCH2Q04721 2471 aa4.76□□□□□ -1.65
CX3CR1-202ENST00000399220 BAHCC1Q9P281 2608 aa4.75□□□□□ -1.65
CX3CR1-202ENST00000399220 HUWE1Q7Z6Z7 4374 aaKnown RBP4.75□□□□□ -1.65
CX3CR1-202ENST00000399220 GAGE12JA6NER3 117 aa4.75□□□□□ -1.65
CX3CR1-202ENST00000399220 NMUP48645 174 aa4.75□□□□□ -1.65
CX3CR1-202ENST00000399220 GAGE4Q13068 117 aa4.75□□□□□ -1.65
CX3CR1-202ENST00000399220 GAGE5Q13069 117 aa4.75□□□□□ -1.65
CX3CR1-202ENST00000399220 GAGE13Q4V321 117 aa4.75□□□□□ -1.65
CX3CR1-202ENST00000399220 CELA1Q9UNI1 258 aa4.75□□□□□ -1.65
CX3CR1-202ENST00000399220 IGLV5-39A0A0G2JS06 123 aa4.75□□□□□ -1.65
CX3CR1-202ENST00000399220 H3BMG7 143 aa4.75□□□□□ -1.65
CX3CR1-202ENST00000399220 DAD1P61803 113 aa4.75□□□□□ -1.65
CX3CR1-202ENST00000399220 HERVK_113P63121 156 aa4.75□□□□□ -1.65
CX3CR1-202ENST00000399220 Q6ZUT4 128 aa4.75□□□□□ -1.65
CX3CR1-202ENST00000399220 PLEKHB2Q96CS7 222 aa4.75□□□□□ -1.65
CX3CR1-202ENST00000399220 NIPBLQ6KC79 2804 aaeCLIP4.74□□□□□ -1.65
CX3CR1-202ENST00000399220 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.74□□□□□ -1.65
CX3CR1-202ENST00000399220 LOC100131303A0A0U1RQF7 123 aa4.74□□□□□ -1.65
CX3CR1-202ENST00000399220 IGKV2-29A2NJV5 120 aaPredicted RBP4.74□□□□□ -1.65
CX3CR1-202ENST00000399220 IGHV1-58A0A0C4DH39 117 aa4.74□□□□□ -1.65
CX3CR1-202ENST00000399220 WNK1Q9H4A3 2382 aa4.73□□□□□ -1.65
CX3CR1-202ENST00000399220 IGHV3-38A0A0C4DH36 116 aa4.73□□□□□ -1.65
CX3CR1-202ENST00000399220 PAX4O43316 350 aa4.73□□□□□ -1.65
CX3CR1-202ENST00000399220 GYPEP15421 78 aa4.73□□□□□ -1.65
CX3CR1-202ENST00000399220 OPRPNQ99935 248 aaPredicted RBP4.73□□□□□ -1.65
CX3CR1-202ENST00000399220 TMEM238C9JI98 176 aa4.73□□□□□ -1.65
CX3CR1-202ENST00000399220 TIMM17BO60830 172 aa4.73□□□□□ -1.65
CX3CR1-202ENST00000399220 DEFB130BP0DP73 79 aa4.73□□□□□ -1.65
CX3CR1-202ENST00000399220 DEFB130AP0DP74 79 aa4.73□□□□□ -1.65
CX3CR1-202ENST00000399220 LINC00242Q5T6M2 205 aa4.73□□□□□ -1.65
CX3CR1-202ENST00000399220 TMEM101Q96IK0 257 aa4.73□□□□□ -1.65
CX3CR1-202ENST00000399220 A0A0J9YXV3 536 aa4.72□□□□□ -1.65
CX3CR1-202ENST00000399220 F5H768 121 aa4.72□□□□□ -1.65
CX3CR1-202ENST00000399220 K7EIL1 84 aa4.72□□□□□ -1.65
CX3CR1-202ENST00000399220 MRPL23Q16540 153 aaKnown RBP4.72□□□□□ -1.65
CX3CR1-202ENST00000399220 LELP1Q5T871 98 aa4.72□□□□□ -1.65
CX3CR1-202ENST00000399220 DNAH1Q9P2D7 4330 aa4.72□□□□□ -1.65
CX3CR1-202ENST00000399220 DNAH9Q9NYC9 4486 aa4.72□□□□□ -1.65
CX3CR1-202ENST00000399220 ICOSQ9Y6W8 199 aa4.72□□□□□ -1.65
CX3CR1-202ENST00000399220 A0A0J9YXY3 114 aa4.72□□□□□ -1.65
CX3CR1-202ENST00000399220 J3QQQ9 107 aa4.72□□□□□ -1.65
CX3CR1-202ENST00000399220 ZFAND6Q6FIF0 208 aa4.72□□□□□ -1.65
CX3CR1-202ENST00000399220 A0A096LPF7 62 aa4.71□□□□□ -1.66
CX3CR1-202ENST00000399220 A0A0J9YY99 117 aa4.71□□□□□ -1.66
CX3CR1-202ENST00000399220 UBE2L6O14933 153 aa4.71□□□□□ -1.66
CX3CR1-202ENST00000399220 IGHV3-30P01768 117 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms