RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 CDSNQ15517 529 aa12.05□□□□□ -0.48
PCDHA12-201ENST00000398631 J3KT08 172 aa12.05□□□□□ -0.48
PCDHA12-201ENST00000398631 HIGD2AQ9BW72 106 aa12.05□□□□□ -0.48
PCDHA12-201ENST00000398631 FN1P02751 2386 aaKnown RBP12.04□□□□□ -0.48
PCDHA12-201ENST00000398631 HIST2H2BDQ6DRA6 164 aa12.04□□□□□ -0.48
PCDHA12-201ENST00000398631 IGLV1-40P01703 118 aa12.04□□□□□ -0.48
PCDHA12-201ENST00000398631 ARHGAP32A7KAX9 2087 aa12.03□□□□□ -0.48
PCDHA12-201ENST00000398631 ZNF22P17026 224 aaPredicted RBP12.03□□□□□ -0.48
PCDHA12-201ENST00000398631 TANC2Q9HCD6 1990 aa12.03□□□□□ -0.48
PCDHA12-201ENST00000398631 TRAV10A0A0B4J240 114 aa12.03□□□□□ -0.48
PCDHA12-201ENST00000398631 PLA2G2AP14555 144 aa12.02□□□□□ -0.49
PCDHA12-201ENST00000398631 LINC00643Q86TS7 51 aa12.02□□□□□ -0.49
PCDHA12-201ENST00000398631 Q8N976 141 aa12.02□□□□□ -0.49
PCDHA12-201ENST00000398631 MUC22E2RYF6 1773 aaPredicted RBP12.02□□□□□ -0.49
PCDHA12-201ENST00000398631 Q6ZS46 218 aa12.02□□□□□ -0.49
PCDHA12-201ENST00000398631 ZNF462Q96JM2 2506 aa12.01□□□□□ -0.49
PCDHA12-201ENST00000398631 LRRK2Q5S007 2527 aa12.01□□□□□ -0.49
PCDHA12-201ENST00000398631 IBA57-AS1B1ANH7 110 aa12.01□□□□□ -0.49
PCDHA12-201ENST00000398631 BBC3Q96PG8 261 aaPredicted RBP12.01□□□□□ -0.49
PCDHA12-201ENST00000398631 TRBV27A0A0K0K1C4 114 aa12□□□□□ -0.49
PCDHA12-201ENST00000398631 TRBV6-5A0A0K0K1A5 114 aa12□□□□□ -0.49
PCDHA12-201ENST00000398631 NUP210LQ5VU65 1888 aa12□□□□□ -0.49
PCDHA12-201ENST00000398631 IGLV2-11P01706 119 aa12□□□□□ -0.49
PCDHA12-201ENST00000398631 KIR2DL5BQ8NHK3 375 aa12□□□□□ -0.49
PCDHA12-201ENST00000398631 TNRC6BQ9UPQ9 1833 aaKnown RBP12□□□□□ -0.49
PCDHA12-201ENST00000398631 PROK1P58294 105 aa12□□□□□ -0.49
PCDHA12-201ENST00000398631 C18orf65Q6ZTR6 163 aa11.99□□□□□ -0.49
PCDHA12-201ENST00000398631 IGKV2D-26A0A0A0MRZ7 120 aa11.99□□□□□ -0.49
PCDHA12-201ENST00000398631 RNF185Q96GF1 192 aa11.99□□□□□ -0.49
PCDHA12-201ENST00000398631 KLLNB2CW77 178 aa11.99□□□□□ -0.49
PCDHA12-201ENST00000398631 RBX1P62877 108 aa11.99□□□□□ -0.49
PCDHA12-201ENST00000398631 TMEM223A0PJW6 202 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 AVPP01185 164 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 WFDC10AQ9H1F0 79 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 TCL1BO95988 128 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 RNASE3P12724 160 aaKnown RBP11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 NDUFC2O95298 119 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 SYCNQ0VAF6 134 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 YPEL4Q96NS1 127 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 HCFC1P51610 2035 aa11.98□□□□□ -0.49
PCDHA12-201ENST00000398631 PYGO1Q9Y3Y4 419 aa11.97□□□□□ -0.49
PCDHA12-201ENST00000398631 A0A087WZ39 114 aa11.97□□□□□ -0.49
PCDHA12-201ENST00000398631 PTH2Q96A98 100 aa11.97□□□□□ -0.49
PCDHA12-201ENST00000398631 H0Y9J4 135 aa11.96□□□□□ -0.49
PCDHA12-201ENST00000398631 CHKB-CPT1BH3BT56 60 aa11.96□□□□□ -0.49
PCDHA12-201ENST00000398631 U3KQK5 164 aa11.96□□□□□ -0.49
PCDHA12-201ENST00000398631 XAGE1AQ9HD64 81 aa11.96□□□□□ -0.49
PCDHA12-201ENST00000398631 KPRPQ5T749 579 aaPredicted RBP11.95□□□□□ -0.5
PCDHA12-201ENST00000398631 FAM19A1Q7Z5A9 133 aa11.95□□□□□ -0.5
PCDHA12-201ENST00000398631 DCANP1Q8TF63 244 aa11.95□□□□□ -0.5
PCDHA12-201ENST00000398631 C14orf132Q9NPU4 83 aa11.95□□□□□ -0.5
PCDHA12-201ENST00000398631 LINC00308Q8TCZ7 52 aa11.95□□□□□ -0.5
PCDHA12-201ENST00000398631 PRR9Q5T870 116 aa11.95□□□□□ -0.5
PCDHA12-201ENST00000398631 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.94□□□□□ -0.5
PCDHA12-201ENST00000398631 SPANXB1Q9NS25 103 aaPredicted RBP11.94□□□□□ -0.5
PCDHA12-201ENST00000398631 C11orf21Q9P2W6 132 aa11.94□□□□□ -0.5
PCDHA12-201ENST00000398631 KRTAP10-9P60411 292 aa11.94□□□□□ -0.5
PCDHA12-201ENST00000398631 SPTBN4Q9H254 2564 aa11.93□□□□□ -0.5
PCDHA12-201ENST00000398631 NDUFA7O95182 113 aa11.93□□□□□ -0.5
PCDHA12-201ENST00000398631 LELP1Q5T871 98 aa11.92□□□□□ -0.5
PCDHA12-201ENST00000398631 CD164L2Q6UWJ8 174 aa11.92□□□□□ -0.5
PCDHA12-201ENST00000398631 WFDC9Q8NEX5 89 aa11.92□□□□□ -0.5
PCDHA12-201ENST00000398631 A0A096LNI7 61 aa11.92□□□□□ -0.5
PCDHA12-201ENST00000398631 C9orf85Q96MD7 179 aa11.92□□□□□ -0.5
PCDHA12-201ENST00000398631 PIK3CD-AS1Q5SR53 167 aa11.92□□□□□ -0.5
PCDHA12-201ENST00000398631 BPY2O14599 106 aa11.91□□□□□ -0.5
PCDHA12-201ENST00000398631 TSHBP01222 138 aa11.91□□□□□ -0.5
PCDHA12-201ENST00000398631 C5orf47Q569G3 176 aa11.91□□□□□ -0.5
PCDHA12-201ENST00000398631 NRACQ8N912 160 aa11.91□□□□□ -0.5
PCDHA12-201ENST00000398631 FASNP49327 2511 aaKnown RBP11.91□□□□□ -0.5
PCDHA12-201ENST00000398631 FAM19A5Q7Z5A7 132 aaPredicted RBP11.9□□□□□ -0.5
PCDHA12-201ENST00000398631 PKD1L2Q7Z442 2459 aa11.9□□□□□ -0.5
PCDHA12-201ENST00000398631 LRCOL1A6NCL2 159 aa11.9□□□□□ -0.5
PCDHA12-201ENST00000398631 POLR2KP53803 58 aaKnown RBP11.9□□□□□ -0.51
PCDHA12-201ENST00000398631 OXLD1Q5BKU9 147 aa11.9□□□□□ -0.51
PCDHA12-201ENST00000398631 LRP4O75096 1905 aa11.89□□□□□ -0.51
PCDHA12-201ENST00000398631 NDUFV3P56181 108 aaKnown RBP11.89□□□□□ -0.51
PCDHA12-201ENST00000398631 IGLV2-18A0A075B6J9 118 aa11.88□□□□□ -0.51
PCDHA12-201ENST00000398631 LOC100131303A0A0U1RQF7 123 aa11.88□□□□□ -0.51
PCDHA12-201ENST00000398631 MRGPRG-AS1Q2M3A8 158 aa11.88□□□□□ -0.51
PCDHA12-201ENST00000398631 MAPKAPK5-AS1Q8N8E1 139 aa11.88□□□□□ -0.51
PCDHA12-201ENST00000398631 SMR3AQ99954 134 aa11.88□□□□□ -0.51
PCDHA12-201ENST00000398631 PRM2P04554 102 aa11.87□□□□□ -0.51
PCDHA12-201ENST00000398631 C6orf99Q4VX62 202 aa11.87□□□□□ -0.51
PCDHA12-201ENST00000398631 IGHV4-30-4P0DP06 118 aa11.87□□□□□ -0.51
PCDHA12-201ENST00000398631 ODF3L2Q3SX64 289 aa11.87□□□□□ -0.51
PCDHA12-201ENST00000398631 ATP5EP2Q5VTU8 51 aa11.87□□□□□ -0.51
PCDHA12-201ENST00000398631 UQCRQO14949 82 aa11.87□□□□□ -0.51
PCDHA12-201ENST00000398631 A0A1W2PPR1 153 aa11.86□□□□□ -0.51
PCDHA12-201ENST00000398631 LINC00959A0A1B0GUT2 108 aa11.86□□□□□ -0.51
PCDHA12-201ENST00000398631 PRB2P02812 416 aaPredicted RBP11.86□□□□□ -0.51
PCDHA12-201ENST00000398631 C7orf33Q8WU49 177 aa11.86□□□□□ -0.51
PCDHA12-201ENST00000398631 MRPS36P82909 103 aaKnown RBP11.86□□□□□ -0.51
PCDHA12-201ENST00000398631 CLUHP3Q96NS8 147 aa11.86□□□□□ -0.51
PCDHA12-201ENST00000398631 TRBV30A0A0K0K1B3 111 aa11.86□□□□□ -0.51
PCDHA12-201ENST00000398631 UBE2D4Q9Y2X8 147 aa11.85□□□□□ -0.51
PCDHA12-201ENST00000398631 TIMM17BO60830 172 aa11.85□□□□□ -0.51
PCDHA12-201ENST00000398631 MT-ATP8P03928 68 aa11.85□□□□□ -0.51
PCDHA12-201ENST00000398631 CRIP2P52943 208 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms