RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.09□□□□□ -0.63
CYLD-202ENST00000398568 COPS9Q8WXC6 57 aa11.08□□□□□ -0.64
CYLD-202ENST00000398568 OXTP01178 125 aa11.08□□□□□ -0.64
CYLD-202ENST00000398568 RNASE13Q5GAN3 156 aaKnown RBP11.08□□□□□ -0.64
CYLD-202ENST00000398568 PYGO1Q9Y3Y4 419 aa11.08□□□□□ -0.64
CYLD-202ENST00000398568 ANKRD17O75179 2603 aaKnown RBP11.07□□□□□ -0.64
CYLD-202ENST00000398568 ATP6V0E1O15342 81 aa11.07□□□□□ -0.64
CYLD-202ENST00000398568 FAM222AQ5U5X8 452 aa11.07□□□□□ -0.64
CYLD-202ENST00000398568 Q5XG85 94 aa11.07□□□□□ -0.64
CYLD-202ENST00000398568 A0A0U1RRA0 63 aa11.06□□□□□ -0.64
CYLD-202ENST00000398568 E7EQL1 145 aa11.06□□□□□ -0.64
CYLD-202ENST00000398568 TLN2Q9Y4G6 2542 aa11.06□□□□□ -0.64
CYLD-202ENST00000398568 PRIMA1Q86XR5 153 aa11.06□□□□□ -0.64
CYLD-202ENST00000398568 Q8N9W7 124 aa11.06□□□□□ -0.64
CYLD-202ENST00000398568 C10orf105Q8TEF2 133 aa11.06□□□□□ -0.64
CYLD-202ENST00000398568 SVEP1Q4LDE5 3571 aa11.06□□□□□ -0.64
CYLD-202ENST00000398568 TEX15Q9BXT5 2789 aa11.06□□□□□ -0.64
CYLD-202ENST00000398568 G3V318 75 aa11.05□□□□□ -0.64
CYLD-202ENST00000398568 Q8N6K4 173 aa11.05□□□□□ -0.64
CYLD-202ENST00000398568 LINC00308Q8TCZ7 52 aa11.05□□□□□ -0.64
CYLD-202ENST00000398568 TINCRA0A1B0GVN0 87 aa11.05□□□□□ -0.64
CYLD-202ENST00000398568 USP17L23D6RBM5 183 aa11.05□□□□□ -0.64
CYLD-202ENST00000398568 MALP21145 153 aa11.05□□□□□ -0.64
CYLD-202ENST00000398568 A0A1W2PPR1 153 aa11.05□□□□□ -0.64
CYLD-202ENST00000398568 Q6JHZ5 121 aa11.05□□□□□ -0.64
CYLD-202ENST00000398568 APRG1Q8IVJ8 170 aa11.05□□□□□ -0.64
CYLD-202ENST00000398568 IGHV3OR16-10A0A075B7F0 116 aa11.04□□□□□ -0.64
CYLD-202ENST00000398568 ODF3BA8MYP8 253 aa11.04□□□□□ -0.64
CYLD-202ENST00000398568 UPK3BQ9BT76 320 aa11.04□□□□□ -0.64
CYLD-202ENST00000398568 CSPG4Q6UVK1 2322 aa11.04□□□□□ -0.64
CYLD-202ENST00000398568 MYO9AB2RTY4 2548 aa11.03□□□□□ -0.64
CYLD-202ENST00000398568 A0A087WVE0 104 aa11.03□□□□□ -0.64
CYLD-202ENST00000398568 MINOS1Q5TGZ0 78 aa11.03□□□□□ -0.64
CYLD-202ENST00000398568 Q9HAA7 133 aa11.03□□□□□ -0.64
CYLD-202ENST00000398568 ACANP16112 2415 aa11.03□□□□□ -0.64
CYLD-202ENST00000398568 CELSR1Q9NYQ6 3014 aa11.03□□□□□ -0.64
CYLD-202ENST00000398568 KRTAP10-9P60411 292 aa11.02□□□□□ -0.64
CYLD-202ENST00000398568 ZNF625Q96I27 306 aaPredicted RBP11.02□□□□□ -0.64
CYLD-202ENST00000398568 NDUFA1O15239 70 aa11.02□□□□□ -0.65
CYLD-202ENST00000398568 FBXL19-AS1Q494R0 122 aa11.01□□□□□ -0.65
CYLD-202ENST00000398568 C1orf43Q9BWL3 253 aa11.01□□□□□ -0.65
CYLD-202ENST00000398568 LY6HO94772 140 aa11.01□□□□□ -0.65
CYLD-202ENST00000398568 PFN2P35080 140 aa11.01□□□□□ -0.65
CYLD-202ENST00000398568 BEAN1Q3B7T3 259 aa11.01□□□□□ -0.65
CYLD-202ENST00000398568 Q8N2B8 174 aa11.01□□□□□ -0.65
CYLD-202ENST00000398568 SOCS3O14543 225 aa11□□□□□ -0.65
CYLD-202ENST00000398568 Q9H8V8 135 aa11□□□□□ -0.65
CYLD-202ENST00000398568 KLLNB2CW77 178 aa11□□□□□ -0.65
CYLD-202ENST00000398568 NDUFC2O95298 119 aa11□□□□□ -0.65
CYLD-202ENST00000398568 PRO0628Q9UI54 55 aa11□□□□□ -0.65
CYLD-202ENST00000398568 MINOS1-NBL1R4GNA1 71 aa11□□□□□ -0.65
CYLD-202ENST00000398568 C14orf132Q9NPU4 83 aa11□□□□□ -0.65
CYLD-202ENST00000398568 MAST4O15021 2626 aa10.99□□□□□ -0.65
CYLD-202ENST00000398568 ZNF415Q09FC8 603 aa10.99□□□□□ -0.65
CYLD-202ENST00000398568 HOXD3P31249 432 aaPredicted RBP10.99□□□□□ -0.65
CYLD-202ENST00000398568 ZANQ9Y493 2812 aa10.99□□□□□ -0.65
CYLD-202ENST00000398568 IGHV3-16A0A0C4DH30 117 aa10.98□□□□□ -0.65
CYLD-202ENST00000398568 NDUFC2-KCTD14E9PQ53 114 aa10.98□□□□□ -0.65
CYLD-202ENST00000398568 FAM218AQ96MZ4 157 aa10.98□□□□□ -0.65
CYLD-202ENST00000398568 TMEM243Q9BU79 118 aa10.98□□□□□ -0.65
CYLD-202ENST00000398568 C9orf85Q96MD7 179 aa10.98□□□□□ -0.65
CYLD-202ENST00000398568 OVOL2Q9BRP0 275 aa10.98□□□□□ -0.65
CYLD-202ENST00000398568 UNQ9165/PRO28630Q6UXU0 137 aa10.98□□□□□ -0.65
CYLD-202ENST00000398568 CDKN2A-AS1Q9UH64 79 aa10.97□□□□□ -0.65
CYLD-202ENST00000398568 C22orf24Q9Y442 160 aa10.97□□□□□ -0.65
CYLD-202ENST00000398568 LINC00846Q9NV44 126 aa10.97□□□□□ -0.65
CYLD-202ENST00000398568 KLK9Q2XQG4 91 aa10.97□□□□□ -0.65
CYLD-202ENST00000398568 LINC01561Q8N1V8 128 aa10.97□□□□□ -0.65
CYLD-202ENST00000398568 KLK9Q9UKQ9 250 aa10.97□□□□□ -0.65
CYLD-202ENST00000398568 ITPR3Q14573 2671 aa10.96□□□□□ -0.65
CYLD-202ENST00000398568 MTORP42345 2549 aa10.96□□□□□ -0.65
CYLD-202ENST00000398568 NDUFA4O00483 81 aa10.96□□□□□ -0.65
CYLD-202ENST00000398568 FHL2Q14192 279 aa10.96□□□□□ -0.65
CYLD-202ENST00000398568 DGAT2L7PQ6IED9 249 aa10.96□□□□□ -0.65
CYLD-202ENST00000398568 RBMY1BA6NDE4 496 aaKnown RBP10.96□□□□□ -0.66
CYLD-202ENST00000398568 RBMY1EA6NEQ0 496 aaKnown RBP10.96□□□□□ -0.66
CYLD-202ENST00000398568 GHRHP01286 108 aa10.96□□□□□ -0.66
CYLD-202ENST00000398568 RBMY1DP0C7P1 496 aaKnown RBP10.96□□□□□ -0.66
CYLD-202ENST00000398568 RBMY1A1P0DJD3 496 aaKnown RBP10.96□□□□□ -0.66
CYLD-202ENST00000398568 RBMY1CP0DJD4 496 aa10.96□□□□□ -0.66
CYLD-202ENST00000398568 RBMY1FQ15415 496 aaKnown RBP10.96□□□□□ -0.66
CYLD-202ENST00000398568 HIST2H2BDQ6DRA6 164 aa10.96□□□□□ -0.66
CYLD-202ENST00000398568 FAM236DA0A1B0GTK5 79 aa10.95□□□□□ -0.66
CYLD-202ENST00000398568 J3QLI3 93 aa10.95□□□□□ -0.66
CYLD-202ENST00000398568 FAM236CP0DP71 79 aa10.95□□□□□ -0.66
CYLD-202ENST00000398568 FAM223BA6NKX1 122 aa10.95□□□□□ -0.66
CYLD-202ENST00000398568 IGHV3-73A0A0B4J1V6 119 aa10.95□□□□□ -0.66
CYLD-202ENST00000398568 IGKV3-20P01619 116 aa10.95□□□□□ -0.66
CYLD-202ENST00000398568 TEP1Q99973 2627 aaKnown RBP10.94□□□□□ -0.66
CYLD-202ENST00000398568 FAM223AQ8IWN6 122 aa10.94□□□□□ -0.66
CYLD-202ENST00000398568 SONP18583 2426 aaKnown RBP10.94□□□□□ -0.66
CYLD-202ENST00000398568 RHPN1-AS1Q9BWJ2 59 aa10.94□□□□□ -0.66
CYLD-202ENST00000398568 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.93□□□□□ -0.66
CYLD-202ENST00000398568 TRAV13-2A0A0B4J235 113 aa10.93□□□□□ -0.66
CYLD-202ENST00000398568 IGKV2-29A2NJV5 120 aaPredicted RBP10.93□□□□□ -0.66
CYLD-202ENST00000398568 IGHG2P01859 326 aa10.93□□□□□ -0.66
CYLD-202ENST00000398568 CRPP02741 224 aa10.93□□□□□ -0.66
CYLD-202ENST00000398568 FAM104AQ969W3 186 aa10.93□□□□□ -0.66
CYLD-202ENST00000398568 TRAV12-2A0A075B6T6 113 aa10.93□□□□□ -0.66
CYLD-202ENST00000398568 IGHV1OR15-1A0A075B7D0 117 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms