RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 Q8N976 141 aa13.16□□□□□ -0.3
TSPAN4-204ENST00000397404 COL7A1Q02388 2944 aa13.16□□□□□ -0.3
TSPAN4-204ENST00000397404 DPM2O94777 84 aa13.16□□□□□ -0.3
TSPAN4-204ENST00000397404 SEC11AP67812 179 aa13.16□□□□□ -0.3
TSPAN4-204ENST00000397404 DEFB104AQ8WTQ1 72 aa13.16□□□□□ -0.3
TSPAN4-204ENST00000397404 C12orf57Q99622 126 aa13.16□□□□□ -0.3
TSPAN4-204ENST00000397404 CST9LQ9H4G1 147 aa13.16□□□□□ -0.3
TSPAN4-204ENST00000397404 PRKDCP78527 4128 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-204ENST00000397404 NUPR2A6NF83 97 aa13.15□□□□□ -0.3
TSPAN4-204ENST00000397404 PRSS29PA6NIE9 313 aa13.15□□□□□ -0.3
TSPAN4-204ENST00000397404 H0Y8G0 127 aa13.15□□□□□ -0.3
TSPAN4-204ENST00000397404 ZNF664Q8N3J9 261 aa13.15□□□□□ -0.3
TSPAN4-204ENST00000397404 CHTOPQ9Y3Y2 248 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-204ENST00000397404 HSBP1L1C9JCN9 74 aa13.14□□□□□ -0.31
TSPAN4-204ENST00000397404 CCL25O15444 150 aa13.14□□□□□ -0.31
TSPAN4-204ENST00000397404 CDC42SE2Q9NRR3 84 aa13.14□□□□□ -0.31
TSPAN4-204ENST00000397404 IGKCP01834 107 aa13.13□□□□□ -0.31
TSPAN4-204ENST00000397404 KLK5Q9Y337 293 aaPredicted RBP13.13□□□□□ -0.31
TSPAN4-204ENST00000397404 TMEM262E9PQX1 116 aa13.11□□□□□ -0.31
TSPAN4-204ENST00000397404 GAGE6Q13070 117 aa13.11□□□□□ -0.31
TSPAN4-204ENST00000397404 VAMP8Q9BV40 100 aa13.11□□□□□ -0.31
TSPAN4-204ENST00000397404 MRPL35Q9NZE8 188 aaKnown RBP13.11□□□□□ -0.31
TSPAN4-204ENST00000397404 TRAV9-2A0A087WT02 112 aa13.1□□□□□ -0.31
TSPAN4-204ENST00000397404 CCL18P55774 89 aa13.1□□□□□ -0.31
TSPAN4-204ENST00000397404 CEMP1Q6PRD7 247 aaPredicted RBP13.1□□□□□ -0.31
TSPAN4-204ENST00000397404 FAM19A3Q7Z5A8 133 aa13.1□□□□□ -0.31
TSPAN4-204ENST00000397404 NFE4Q86UQ8 179 aa13.1□□□□□ -0.31
TSPAN4-204ENST00000397404 Q6ZUT4 128 aa13.1□□□□□ -0.31
TSPAN4-204ENST00000397404 IGLL5B9A064 214 aa13.09□□□□□ -0.31
TSPAN4-204ENST00000397404 IGLC3P0DOY3 106 aa13.09□□□□□ -0.31
TSPAN4-204ENST00000397404 TINCRA0A1B0GVN0 87 aa13.08□□□□□ -0.32
TSPAN4-204ENST00000397404 RBX1P62877 108 aa13.08□□□□□ -0.32
TSPAN4-204ENST00000397404 FAM104AQ969W3 186 aa13.08□□□□□ -0.32
TSPAN4-204ENST00000397404 K7EP13 123 aa13.06□□□□□ -0.32
TSPAN4-204ENST00000397404 UBE2D1P51668 147 aa13.06□□□□□ -0.32
TSPAN4-204ENST00000397404 HERVK_113P63121 156 aa13.06□□□□□ -0.32
TSPAN4-204ENST00000397404 ESRGQ1W209 222 aa13.06□□□□□ -0.32
TSPAN4-204ENST00000397404 OPRPNQ99935 248 aaPredicted RBP13.06□□□□□ -0.32
TSPAN4-204ENST00000397404 MRPS16Q9Y3D3 137 aaKnown RBP13.06□□□□□ -0.32
TSPAN4-204ENST00000397404 MPV17L2Q567V2 206 aa13.05□□□□□ -0.32
TSPAN4-204ENST00000397404 UPK3BQ9BT76 320 aa13.05□□□□□ -0.32
TSPAN4-204ENST00000397404 IGLV4-69A0A075B6H9 119 aa13.04□□□□□ -0.32
TSPAN4-204ENST00000397404 C11orf86A6NJI1 115 aa13.04□□□□□ -0.32
TSPAN4-204ENST00000397404 HERVK_113P61574 105 aa13.04□□□□□ -0.32
TSPAN4-204ENST00000397404 LINC01556Q5JQF7 62 aa13.04□□□□□ -0.32
TSPAN4-204ENST00000397404 PMCHL2Q9BQD1 86 aa13.04□□□□□ -0.32
TSPAN4-204ENST00000397404 CHAC1Q9BUX1 264 aa13.04□□□□□ -0.32
TSPAN4-204ENST00000397404 GEMIN7Q9H840 131 aaKnown RBP13.04□□□□□ -0.32
TSPAN4-204ENST00000397404 FBN3Q75N90 2809 aa13.03□□□□□ -0.32
TSPAN4-204ENST00000397404 IGLV4-60A0A075B6I1 120 aa13.02□□□□□ -0.33
TSPAN4-204ENST00000397404 TSTD3H0UI37 97 aa13.02□□□□□ -0.33
TSPAN4-204ENST00000397404 H3BRM9 83 aa13.02□□□□□ -0.33
TSPAN4-204ENST00000397404 IGLV5-45A0A087WSX0 123 aa13.01□□□□□ -0.33
TSPAN4-204ENST00000397404 SS18Q15532 418 aa13.01□□□□□ -0.33
TSPAN4-204ENST00000397404 SPATA45Q537H7 98 aa13.01□□□□□ -0.33
TSPAN4-204ENST00000397404 ZC2HC1BQ5TFG8 222 aa13.01□□□□□ -0.33
TSPAN4-204ENST00000397404 ATOH7Q8N100 152 aa13.01□□□□□ -0.33
TSPAN4-204ENST00000397404 DNAH7Q8WXX0 4024 aa13.01□□□□□ -0.33
TSPAN4-204ENST00000397404 DYNC2H1Q8NCM8 4307 aaKnown RBP13.01□□□□□ -0.33
TSPAN4-204ENST00000397404 ANGP03950 147 aaKnown RBP13□□□□□ -0.33
TSPAN4-204ENST00000397404 DNAH10OSP0CZ25 163 aa13□□□□□ -0.33
TSPAN4-204ENST00000397404 APLNQ9ULZ1 77 aa13□□□□□ -0.33
TSPAN4-204ENST00000397404 PAM16Q9Y3D7 125 aa13□□□□□ -0.33
TSPAN4-204ENST00000397404 TRAV8-4A0A0B4J246 113 aa12.99□□□□□ -0.33
TSPAN4-204ENST00000397404 A0A0J9YXV3 536 aa12.99□□□□□ -0.33
TSPAN4-204ENST00000397404 C10orf126Q8N4M7 172 aa12.99□□□□□ -0.33
TSPAN4-204ENST00000397404 PRR34Q9NV39 138 aa12.99□□□□□ -0.33
TSPAN4-204ENST00000397404 TRAV13-1A0A0B4J241 112 aa12.98□□□□□ -0.33
TSPAN4-204ENST00000397404 RNASE13Q5GAN3 156 aaKnown RBP12.98□□□□□ -0.33
TSPAN4-204ENST00000397404 TMEM170BQ5T4T1 132 aa12.98□□□□□ -0.33
TSPAN4-204ENST00000397404 LINC00242Q5T6M2 205 aa12.98□□□□□ -0.33
TSPAN4-204ENST00000397404 CDPF1Q6NVV7 123 aa12.98□□□□□ -0.33
TSPAN4-204ENST00000397404 SIVA1O15304 175 aa12.97□□□□□ -0.33
TSPAN4-204ENST00000397404 CRPP02741 224 aa12.97□□□□□ -0.33
TSPAN4-204ENST00000397404 REG3AQ06141 175 aa12.97□□□□□ -0.33
TSPAN4-204ENST00000397404 LINC01561Q8N1V8 128 aa12.97□□□□□ -0.33
TSPAN4-204ENST00000397404 LINC00588Q9Y4M8 146 aa12.97□□□□□ -0.33
TSPAN4-204ENST00000397404 LINC00959A0A1B0GUT2 108 aa12.97□□□□□ -0.33
TSPAN4-204ENST00000397404 E9PLD3 99 aa12.97□□□□□ -0.33
TSPAN4-204ENST00000397404 ZNF22P17026 224 aaPredicted RBP12.97□□□□□ -0.33
TSPAN4-204ENST00000397404 MIAQ16674 131 aa12.97□□□□□ -0.33
TSPAN4-204ENST00000397404 LINC00269Q8N2A0 174 aa12.97□□□□□ -0.33
TSPAN4-204ENST00000397404 WWC2-AS2Q96NR7 200 aa12.97□□□□□ -0.33
TSPAN4-204ENST00000397404 hDV102S1A0JD36 115 aa12.96□□□□□ -0.34
TSPAN4-204ENST00000397404 WFDC10BQ8IUB3 73 aa12.96□□□□□ -0.34
TSPAN4-204ENST00000397404 LINC00469Q8N7U9 141 aa12.96□□□□□ -0.34
TSPAN4-204ENST00000397404 TMEM223A0PJW6 202 aa12.94□□□□□ -0.34
TSPAN4-204ENST00000397404 STPG4Q8N801 248 aa12.94□□□□□ -0.34
TSPAN4-204ENST00000397404 MUC7Q8TAX7 377 aa12.94□□□□□ -0.34
TSPAN4-204ENST00000397404 DLEU1O43261 78 aa12.93□□□□□ -0.34
TSPAN4-204ENST00000397404 PLEKHB2Q96CS7 222 aa12.93□□□□□ -0.34
TSPAN4-204ENST00000397404 UQCR10Q9UDW1 63 aa12.93□□□□□ -0.34
TSPAN4-204ENST00000397404 CD164L2Q6UWJ8 174 aa12.92□□□□□ -0.34
TSPAN4-204ENST00000397404 KLK12Q9UKR0 248 aa12.92□□□□□ -0.34
TSPAN4-204ENST00000397404 IGHV3OR16-9A0A0B4J2B5 98 aa12.91□□□□□ -0.34
TSPAN4-204ENST00000397404 COX8AP10176 69 aa12.91□□□□□ -0.34
TSPAN4-204ENST00000397404 MAJINQ3KP22 176 aa12.91□□□□□ -0.34
TSPAN4-204ENST00000397404 UBE2DNLQ8IWF7 75 aa12.91□□□□□ -0.34
TSPAN4-204ENST00000397404 TRAV8-3A0A0A6YYJ7 113 aa12.91□□□□□ -0.34
TSPAN4-204ENST00000397404 IGHV1-58A0A0C4DH39 117 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms