RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 LINC00310P59036 64 aa15.94■□□□□ 0.14
TSPAN4-203ENST00000397397 CSDC2Q9Y534 153 aaKnown RBP15.94■□□□□ 0.14
TSPAN4-203ENST00000397397 IBA57-AS1B1ANH7 110 aa15.93■□□□□ 0.14
TSPAN4-203ENST00000397397 HBDP02042 147 aa15.93■□□□□ 0.14
TSPAN4-203ENST00000397397 NDUFA6P56556 154 aa15.93■□□□□ 0.14
TSPAN4-203ENST00000397397 A0A096LNJ9 63 aa15.92■□□□□ 0.14
TSPAN4-203ENST00000397397 LINC01549A6NIU2 74 aa15.92■□□□□ 0.14
TSPAN4-203ENST00000397397 NUPR1O60356 82 aa15.92■□□□□ 0.14
TSPAN4-203ENST00000397397 Q6ZR54 194 aa15.92■□□□□ 0.14
TSPAN4-203ENST00000397397 LINC00269Q8N2A0 174 aa15.92■□□□□ 0.14
TSPAN4-203ENST00000397397 CDC42SE2Q9NRR3 84 aa15.92■□□□□ 0.14
TSPAN4-203ENST00000397397 PYGO1Q9Y3Y4 419 aa15.92■□□□□ 0.14
TSPAN4-203ENST00000397397 KMT2AQ03164 3969 aa15.92■□□□□ 0.14
TSPAN4-203ENST00000397397 CLPSL2Q6UWE3 100 aa15.91■□□□□ 0.14
TSPAN4-203ENST00000397397 ZNF664Q8N3J9 261 aa15.91■□□□□ 0.14
TSPAN4-203ENST00000397397 SCGB3A1Q96QR1 104 aa15.91■□□□□ 0.14
TSPAN4-203ENST00000397397 CRPP02741 224 aa15.9■□□□□ 0.14
TSPAN4-203ENST00000397397 Q6ZUT4 128 aa15.9■□□□□ 0.14
TSPAN4-203ENST00000397397 UBE2WQ96B02 151 aa15.9■□□□□ 0.14
TSPAN4-203ENST00000397397 OPRPNQ99935 248 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-203ENST00000397397 FAM19A2Q8N3H0 131 aa15.89■□□□□ 0.13
TSPAN4-203ENST00000397397 IGIPA6NJ69 53 aa15.88■□□□□ 0.13
TSPAN4-203ENST00000397397 MRPS36P82909 103 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-203ENST00000397397 REG3AQ06141 175 aa15.88■□□□□ 0.13
TSPAN4-203ENST00000397397 RNASE13Q5GAN3 156 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-203ENST00000397397 ENHOQ6UWT2 76 aa15.88■□□□□ 0.13
TSPAN4-203ENST00000397397 ERASQ7Z444 233 aa15.88■□□□□ 0.13
TSPAN4-203ENST00000397397 Q9HAA7 133 aa15.88■□□□□ 0.13
TSPAN4-203ENST00000397397 IGLV4-3A0A075B6K6 122 aa15.87■□□□□ 0.13
TSPAN4-203ENST00000397397 IGKV3OR2-268A0A0C4DH90 116 aa15.87■□□□□ 0.13
TSPAN4-203ENST00000397397 COA6Q5JTJ3 125 aaKnown RBP15.87■□□□□ 0.13
TSPAN4-203ENST00000397397 TIMM17AQ99595 171 aa15.87■□□□□ 0.13
TSPAN4-203ENST00000397397 PRR34Q9NV39 138 aa15.87■□□□□ 0.13
TSPAN4-203ENST00000397397 PDZD11Q5EBL8 140 aa15.86■□□□□ 0.13
TSPAN4-203ENST00000397397 FAM104AQ969W3 186 aa15.86■□□□□ 0.13
TSPAN4-203ENST00000397397 TMEM141Q96I45 108 aa15.86■□□□□ 0.13
TSPAN4-203ENST00000397397 TRAV8-3A0A0A6YYJ7 113 aa15.85■□□□□ 0.13
TSPAN4-203ENST00000397397 NPSP0C0P6 89 aa15.85■□□□□ 0.13
TSPAN4-203ENST00000397397 Q6ZN92 141 aa15.85■□□□□ 0.13
TSPAN4-203ENST00000397397 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.83■□□□□ 0.12
TSPAN4-203ENST00000397397 MIAQ16674 131 aa15.83■□□□□ 0.12
TSPAN4-203ENST00000397397 PAPPA-AS1Q5QFB9 102 aa15.83■□□□□ 0.12
TSPAN4-203ENST00000397397 C6orf223Q8N319 242 aa15.83■□□□□ 0.12
TSPAN4-203ENST00000397397 ATP5LO75964 103 aa15.82■□□□□ 0.12
TSPAN4-203ENST00000397397 TEX43Q6ZNM6 134 aa15.82■□□□□ 0.12
TSPAN4-203ENST00000397397 VCX2Q9H322 139 aa15.82■□□□□ 0.12
TSPAN4-203ENST00000397397 S100A6P06703 90 aa15.81■□□□□ 0.12
TSPAN4-203ENST00000397397 C1orf134Q5TEV5 83 aa15.81■□□□□ 0.12
TSPAN4-203ENST00000397397 ZC2HC1BQ5TFG8 222 aa15.81■□□□□ 0.12
TSPAN4-203ENST00000397397 NFE4Q86UQ8 179 aa15.81■□□□□ 0.12
TSPAN4-203ENST00000397397 IGKV2D-24A0A075B6R9 120 aa15.8■□□□□ 0.12
TSPAN4-203ENST00000397397 IFITM10A6NMD0 228 aa15.8■□□□□ 0.12
TSPAN4-203ENST00000397397 RMI2Q96E14 147 aa15.8■□□□□ 0.12
TSPAN4-203ENST00000397397 IGLV10-54A0A075B6I4 117 aa15.79■□□□□ 0.12
TSPAN4-203ENST00000397397 TRAV13-1A0A0B4J241 112 aa15.79■□□□□ 0.12
TSPAN4-203ENST00000397397 LINC00959A0A1B0GUT2 108 aa15.79■□□□□ 0.12
TSPAN4-203ENST00000397397 LEPROTL1O95214 131 aa15.79■□□□□ 0.12
TSPAN4-203ENST00000397397 AMELXQ99217 191 aa15.79■□□□□ 0.12
TSPAN4-203ENST00000397397 C1orf43Q9BWL3 253 aa15.79■□□□□ 0.12
TSPAN4-203ENST00000397397 TRAV8-4A0A0B4J246 113 aa15.78■□□□□ 0.12
TSPAN4-203ENST00000397397 FABP4P15090 132 aa15.78■□□□□ 0.12
TSPAN4-203ENST00000397397 LINC00173Q6ZV60 143 aa15.78■□□□□ 0.12
TSPAN4-203ENST00000397397 BAALCQ8WXS3 180 aa15.78■□□□□ 0.12
TSPAN4-203ENST00000397397 C2orf88Q9BSF0 95 aa15.78■□□□□ 0.12
TSPAN4-203ENST00000397397 EPPK1P58107 5090 aaKnown RBP15.78■□□□□ 0.12
TSPAN4-203ENST00000397397 SS18Q15532 418 aa15.77■□□□□ 0.12
TSPAN4-203ENST00000397397 IFI27L1Q96BM0 104 aa15.77■□□□□ 0.12
TSPAN4-203ENST00000397397 TM2D2Q9BX73 214 aa15.77■□□□□ 0.11
TSPAN4-203ENST00000397397 HSPB8Q9UJY1 196 aa15.77■□□□□ 0.11
TSPAN4-203ENST00000397397 PMVKQ15126 192 aa15.75■□□□□ 0.11
TSPAN4-203ENST00000397397 CHCHD10Q8WYQ3 142 aaPredicted RBP15.75■□□□□ 0.11
TSPAN4-203ENST00000397397 CCL25O15444 150 aa15.74■□□□□ 0.11
TSPAN4-203ENST00000397397 Q6ZRN7 208 aaPredicted RBP15.74■□□□□ 0.11
TSPAN4-203ENST00000397397 CST9LQ9H4G1 147 aa15.74■□□□□ 0.11
TSPAN4-203ENST00000397397 COX11Q9Y6N1 276 aa15.74■□□□□ 0.11
TSPAN4-203ENST00000397397 PSCAO43653 123 aa15.73■□□□□ 0.11
TSPAN4-203ENST00000397397 PRSS1P07477 247 aa15.73■□□□□ 0.11
TSPAN4-203ENST00000397397 XCL1P47992 114 aa15.73■□□□□ 0.11
TSPAN4-203ENST00000397397 UBE2D1P51668 147 aa15.73■□□□□ 0.11
TSPAN4-203ENST00000397397 PRSS29PA6NIE9 313 aa15.72■□□□□ 0.11
TSPAN4-203ENST00000397397 TMA7Q9Y2S6 64 aaKnown RBP15.72■□□□□ 0.11
TSPAN4-203ENST00000397397 DNAH10Q8IVF4 4471 aa15.72■□□□□ 0.11
TSPAN4-203ENST00000397397 DNAH2Q9P225 4427 aa15.72■□□□□ 0.11
TSPAN4-203ENST00000397397 GAGE12HA6NDE8 117 aa15.71■□□□□ 0.11
TSPAN4-203ENST00000397397 SNRPEP62304 92 aaKnown RBP15.71■□□□□ 0.11
TSPAN4-203ENST00000397397 KRTAP26-1Q6PEX3 210 aa15.71■□□□□ 0.11
TSPAN4-203ENST00000397397 HIST3H2BBQ8N257 126 aa15.7■□□□□ 0.1
TSPAN4-203ENST00000397397 PACRGQ96M98 296 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-203ENST00000397397 RTL8CO15255 209 aa15.69■□□□□ 0.1
TSPAN4-203ENST00000397397 H0Y8G0 127 aa15.68■□□□□ 0.1
TSPAN4-203ENST00000397397 S100A2P29034 98 aa15.68■□□□□ 0.1
TSPAN4-203ENST00000397397 LINC00242Q5T6M2 205 aa15.68■□□□□ 0.1
TSPAN4-203ENST00000397397 CD164L2Q6UWJ8 174 aa15.68■□□□□ 0.1
TSPAN4-203ENST00000397397 MAP1LC3CQ9BXW4 147 aa15.68■□□□□ 0.1
TSPAN4-203ENST00000397397 FRAS1Q86XX4 4008 aa15.67■□□□□ 0.1
TSPAN4-203ENST00000397397 A0A0J9YXV3 536 aa15.67■□□□□ 0.1
TSPAN4-203ENST00000397397 C5orf52A6NGY3 159 aa15.67■□□□□ 0.1
TSPAN4-203ENST00000397397 FOXI1Q12951 378 aa15.67■□□□□ 0.1
TSPAN4-203ENST00000397397 MAPKAPK5-AS1Q8N8E1 139 aa15.67■□□□□ 0.1
TSPAN4-203ENST00000397397 TRAV12-1A0A0B4J245 112 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms