RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 LYPD5Q6UWN5 251 aa9.48□□□□□ -0.89
VAPB-202ENST00000395802 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.47□□□□□ -0.89
VAPB-202ENST00000395802 TRAV9-2A0A087WT02 112 aa9.47□□□□□ -0.89
VAPB-202ENST00000395802 IGKV2-29A2NJV5 120 aaPredicted RBP9.47□□□□□ -0.89
VAPB-202ENST00000395802 ODF1Q14990 250 aa9.47□□□□□ -0.89
VAPB-202ENST00000395802 CEMP1Q6PRD7 247 aaPredicted RBP9.47□□□□□ -0.89
VAPB-202ENST00000395802 MRPL52Q86TS9 123 aaKnown RBP9.47□□□□□ -0.89
VAPB-202ENST00000395802 UBE2D4Q9Y2X8 147 aa9.47□□□□□ -0.89
VAPB-202ENST00000395802 FBN3Q75N90 2809 aa9.47□□□□□ -0.89
VAPB-202ENST00000395802 FGF6P10767 208 aa9.47□□□□□ -0.89
VAPB-202ENST00000395802 TMEM262E9PQX1 116 aa9.46□□□□□ -0.9
VAPB-202ENST00000395802 CCL18P55774 89 aa9.46□□□□□ -0.9
VAPB-202ENST00000395802 OR5A1Q8NGJ0 315 aa9.46□□□□□ -0.9
VAPB-202ENST00000395802 LINC00587B1AMM8 73 aa9.45□□□□□ -0.9
VAPB-202ENST00000395802 MRPS36P82909 103 aaKnown RBP9.45□□□□□ -0.9
VAPB-202ENST00000395802 SPATA45Q537H7 98 aa9.45□□□□□ -0.9
VAPB-202ENST00000395802 VCX2Q9H322 139 aa9.45□□□□□ -0.9
VAPB-202ENST00000395802 TRAV12-1A0A0B4J245 112 aa9.45□□□□□ -0.9
VAPB-202ENST00000395802 A0A1B0GUV1 79 aa9.45□□□□□ -0.9
VAPB-202ENST00000395802 BAALCQ8WXS3 180 aa9.45□□□□□ -0.9
VAPB-202ENST00000395802 A0A087WX48 190 aa9.44□□□□□ -0.9
VAPB-202ENST00000395802 hDV102S1A0JD36 115 aa9.44□□□□□ -0.9
VAPB-202ENST00000395802 PMVKQ15126 192 aa9.44□□□□□ -0.9
VAPB-202ENST00000395802 C2orf88Q9BSF0 95 aa9.44□□□□□ -0.9
VAPB-202ENST00000395802 GAGE6Q13070 117 aa9.43□□□□□ -0.9
VAPB-202ENST00000395802 IGLV4-3A0A075B6K6 122 aa9.42□□□□□ -0.9
VAPB-202ENST00000395802 ESRGQ1W209 222 aa9.42□□□□□ -0.9
VAPB-202ENST00000395802 DDTP30046 118 aa9.42□□□□□ -0.9
VAPB-202ENST00000395802 WWC2-AS2Q96NR7 200 aa9.42□□□□□ -0.9
VAPB-202ENST00000395802 MRPL35Q9NZE8 188 aaKnown RBP9.42□□□□□ -0.9
VAPB-202ENST00000395802 F8VRH5 84 aa9.41□□□□□ -0.9
VAPB-202ENST00000395802 IGLC3P0DOY3 106 aa9.41□□□□□ -0.9
VAPB-202ENST00000395802 CDC42SE2Q9NRR3 84 aa9.41□□□□□ -0.9
VAPB-202ENST00000395802 HSBP1L1C9JCN9 74 aa9.4□□□□□ -0.9
VAPB-202ENST00000395802 DPM2O94777 84 aa9.4□□□□□ -0.9
VAPB-202ENST00000395802 IGKCP01834 107 aa9.4□□□□□ -0.9
VAPB-202ENST00000395802 FAM104AQ969W3 186 aa9.4□□□□□ -0.9
VAPB-202ENST00000395802 AMELXQ99217 191 aa9.4□□□□□ -0.9
VAPB-202ENST00000395802 CST9LQ9H4G1 147 aa9.4□□□□□ -0.9
VAPB-202ENST00000395802 PRSS29PA6NIE9 313 aa9.4□□□□□ -0.91
VAPB-202ENST00000395802 PLNP26678 52 aa9.4□□□□□ -0.91
VAPB-202ENST00000395802 SEC11AP67812 179 aa9.4□□□□□ -0.91
VAPB-202ENST00000395802 MUC7Q8TAX7 377 aa9.4□□□□□ -0.91
VAPB-202ENST00000395802 OPRPNQ99935 248 aaPredicted RBP9.4□□□□□ -0.91
VAPB-202ENST00000395802 CHTOPQ9Y3Y2 248 aaKnown RBP9.4□□□□□ -0.91
VAPB-202ENST00000395802 DNAH7Q8WXX0 4024 aa9.39□□□□□ -0.91
VAPB-202ENST00000395802 RBX1P62877 108 aa9.39□□□□□ -0.91
VAPB-202ENST00000395802 MPV17L2Q567V2 206 aa9.39□□□□□ -0.91
VAPB-202ENST00000395802 MIEN1Q9BRT3 115 aa9.39□□□□□ -0.91
VAPB-202ENST00000395802 APLNQ9ULZ1 77 aa9.39□□□□□ -0.91
VAPB-202ENST00000395802 MRPS16Q9Y3D3 137 aaKnown RBP9.39□□□□□ -0.91
VAPB-202ENST00000395802 ZC2HC1BQ5TFG8 222 aa9.38□□□□□ -0.91
VAPB-202ENST00000395802 Q6ZUT4 128 aa9.38□□□□□ -0.91
VAPB-202ENST00000395802 STPG4Q8N801 248 aa9.38□□□□□ -0.91
VAPB-202ENST00000395802 UPK3BQ9BT76 320 aa9.38□□□□□ -0.91
VAPB-202ENST00000395802 CCL25O15444 150 aa9.38□□□□□ -0.91
VAPB-202ENST00000395802 ANKRD39Q53RE8 183 aa9.38□□□□□ -0.91
VAPB-202ENST00000395802 IGLV4-69A0A075B6H9 119 aa9.37□□□□□ -0.91
VAPB-202ENST00000395802 K7EP13 123 aa9.37□□□□□ -0.91
VAPB-202ENST00000395802 C14orf144Q96I85 54 aa9.37□□□□□ -0.91
VAPB-202ENST00000395802 LINC00588Q9Y4M8 146 aa9.37□□□□□ -0.91
VAPB-202ENST00000395802 ANGP03950 147 aaKnown RBP9.36□□□□□ -0.91
VAPB-202ENST00000395802 LINC01556Q5JQF7 62 aa9.36□□□□□ -0.91
VAPB-202ENST00000395802 UBE2DNLQ8IWF7 75 aa9.36□□□□□ -0.91
VAPB-202ENST00000395802 UQCR10Q9UDW1 63 aa9.36□□□□□ -0.91
VAPB-202ENST00000395802 IGLV4-60A0A075B6I1 120 aa9.35□□□□□ -0.91
VAPB-202ENST00000395802 SIVA1O15304 175 aa9.35□□□□□ -0.91
VAPB-202ENST00000395802 WFDC10BQ8IUB3 73 aa9.35□□□□□ -0.91
VAPB-202ENST00000395802 DYNC2H1Q8NCM8 4307 aaKnown RBP9.35□□□□□ -0.91
VAPB-202ENST00000395802 CRPP02741 224 aa9.34□□□□□ -0.91
VAPB-202ENST00000395802 DNAH10OSP0CZ25 163 aa9.34□□□□□ -0.91
VAPB-202ENST00000395802 HERVK_113P63121 156 aa9.34□□□□□ -0.91
VAPB-202ENST00000395802 RNASE13Q5GAN3 156 aaKnown RBP9.34□□□□□ -0.91
VAPB-202ENST00000395802 C10orf126Q8N4M7 172 aa9.34□□□□□ -0.91
VAPB-202ENST00000395802 GEMIN7Q9H840 131 aaKnown RBP9.34□□□□□ -0.91
VAPB-202ENST00000395802 TP73-AS1Q9UF72 201 aa9.34□□□□□ -0.91
VAPB-202ENST00000395802 TRAV13-1A0A0B4J241 112 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 TINCRA0A1B0GVN0 87 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 C11orf86A6NJI1 115 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 UBE2D1P51668 147 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 SS18Q15532 418 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 FAM19A3Q7Z5A8 133 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 LINC00269Q8N2A0 174 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 CSMD3Q7Z407 3707 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 TGP01266 2768 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 C3orf84H3BNL1 204 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 IGHV3-30P01768 117 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 IGHV3-33P01772 117 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 IGHV3-30-3P0DP02 117 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 IGHV3-30-5P0DP03 117 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 COX8AP10176 69 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 REG3AQ06141 175 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 ZFAND6Q6FIF0 208 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 NFE4Q86UQ8 179 aa9.33□□□□□ -0.92
VAPB-202ENST00000395802 IGKV2D-26A0A0A0MRZ7 120 aa9.32□□□□□ -0.92
VAPB-202ENST00000395802 SLC25A34Q6PIV7 304 aa9.32□□□□□ -0.92
VAPB-202ENST00000395802 CHAC1Q9BUX1 264 aa9.32□□□□□ -0.92
VAPB-202ENST00000395802 Q9H8V8 135 aa9.32□□□□□ -0.92
VAPB-202ENST00000395802 KLK12Q9UKR0 248 aa9.32□□□□□ -0.92
VAPB-202ENST00000395802 TRAV8-4A0A0B4J246 113 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms