RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 TMEM242Q9NWH2 141 aa10.25□□□□□ -0.77
CXCL12-206ENST00000395795 IGHV3-64A0A075B6Q5 118 aa10.24□□□□□ -0.77
CXCL12-206ENST00000395795 A0A087WYN8 130 aa10.24□□□□□ -0.77
CXCL12-206ENST00000395795 GVQW2A0A096LPI5 108 aaPredicted RBP10.24□□□□□ -0.77
CXCL12-206ENST00000395795 TRBV27A0A0K0K1C4 114 aa10.24□□□□□ -0.77
CXCL12-206ENST00000395795 C10orf91Q5T1B1 145 aa10.24□□□□□ -0.77
CXCL12-206ENST00000395795 SLC7A5P1Q8MH63 180 aa10.24□□□□□ -0.77
CXCL12-206ENST00000395795 NUP35Q8NFH5 326 aa10.24□□□□□ -0.77
CXCL12-206ENST00000395795 HIGD2BQ4VC39 106 aa10.23□□□□□ -0.77
CXCL12-206ENST00000395795 AMMECR1LQ6DCA0 310 aa10.23□□□□□ -0.77
CXCL12-206ENST00000395795 RNASEKQ6P5S7 137 aaKnown RBP10.23□□□□□ -0.77
CXCL12-206ENST00000395795 NRACQ8N912 160 aa10.23□□□□□ -0.77
CXCL12-206ENST00000395795 OR5A1Q8NGJ0 315 aa10.23□□□□□ -0.77
CXCL12-206ENST00000395795 PLAC8Q9NZF1 115 aa10.23□□□□□ -0.77
CXCL12-206ENST00000395795 SMKR1H3BMG3 65 aa10.22□□□□□ -0.77
CXCL12-206ENST00000395795 PPP1R2P9O14990 202 aa10.22□□□□□ -0.77
CXCL12-206ENST00000395795 ZNF25P17030 456 aaPredicted RBP10.22□□□□□ -0.77
CXCL12-206ENST00000395795 PMCHP20382 165 aa10.22□□□□□ -0.77
CXCL12-206ENST00000395795 MRPL52Q86TS9 123 aaKnown RBP10.22□□□□□ -0.77
CXCL12-206ENST00000395795 PRSS3P2Q8NHM4 247 aa10.22□□□□□ -0.77
CXCL12-206ENST00000395795 ST20Q9HBF5 79 aa10.22□□□□□ -0.77
CXCL12-206ENST00000395795 AP5S1Q9NUS5 200 aa10.22□□□□□ -0.77
CXCL12-206ENST00000395795 CARHSP1Q9Y2V2 147 aaKnown RBP10.22□□□□□ -0.77
CXCL12-206ENST00000395795 HMCN2Q8NDA2 5059 aa10.22□□□□□ -0.77
CXCL12-206ENST00000395795 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.21□□□□□ -0.77
CXCL12-206ENST00000395795 LINC00959A0A1B0GUT2 108 aa10.21□□□□□ -0.77
CXCL12-206ENST00000395795 MT-ND4LP03901 98 aa10.21□□□□□ -0.77
CXCL12-206ENST00000395795 MT1HL1P0DM35 61 aa10.21□□□□□ -0.77
CXCL12-206ENST00000395795 ANAPC16Q96DE5 110 aa10.21□□□□□ -0.77
CXCL12-206ENST00000395795 MRAP2Q96G30 205 aa10.21□□□□□ -0.77
CXCL12-206ENST00000395795 CDC42SE2Q9NRR3 84 aa10.21□□□□□ -0.77
CXCL12-206ENST00000395795 COX6A2Q02221 97 aa10.2□□□□□ -0.78
CXCL12-206ENST00000395795 CFAP161Q6P656 301 aa10.2□□□□□ -0.78
CXCL12-206ENST00000395795 CCL25O15444 150 aa10.18□□□□□ -0.78
CXCL12-206ENST00000395795 XCL1P47992 114 aa10.18□□□□□ -0.78
CXCL12-206ENST00000395795 FAM104AQ969W3 186 aa10.18□□□□□ -0.78
CXCL12-206ENST00000395795 BORCS7Q96B45 105 aa10.18□□□□□ -0.78
CXCL12-206ENST00000395795 LINC00526Q96FQ7 95 aa10.18□□□□□ -0.78
CXCL12-206ENST00000395795 SMIM27A0A1W2PRY6 76 aa10.17□□□□□ -0.78
CXCL12-206ENST00000395795 APOC3P02656 99 aa10.17□□□□□ -0.78
CXCL12-206ENST00000395795 CTDSP1Q9GZU7 261 aa10.17□□□□□ -0.78
CXCL12-206ENST00000395795 NAT8BQ9UHF3 227 aa10.17□□□□□ -0.78
CXCL12-206ENST00000395795 A0A096LNI7 61 aa10.16□□□□□ -0.78
CXCL12-206ENST00000395795 C7orf77A4D0Y5 90 aa10.16□□□□□ -0.78
CXCL12-206ENST00000395795 SNAPINO95295 136 aa10.16□□□□□ -0.78
CXCL12-206ENST00000395795 RIGQ13278 110 aa10.16□□□□□ -0.78
CXCL12-206ENST00000395795 MRPL51Q4U2R6 128 aaKnown RBP10.16□□□□□ -0.78
CXCL12-206ENST00000395795 FAM104BQ5XKR9 115 aa10.16□□□□□ -0.78
CXCL12-206ENST00000395795 SVBPQ8N300 66 aa10.16□□□□□ -0.78
CXCL12-206ENST00000395795 ZNF664Q8N3J9 261 aa10.16□□□□□ -0.78
CXCL12-206ENST00000395795 UBE2D4Q9Y2X8 147 aa10.16□□□□□ -0.78
CXCL12-206ENST00000395795 VCYO14598 125 aa10.15□□□□□ -0.78
CXCL12-206ENST00000395795 SUMO2P61956 95 aaKnown RBP10.15□□□□□ -0.78
CXCL12-206ENST00000395795 RHEBQ15382 184 aa10.15□□□□□ -0.78
CXCL12-206ENST00000395795 TMEM101Q96IK0 257 aa10.15□□□□□ -0.78
CXCL12-206ENST00000395795 PHOX2AO14813 284 aa10.14□□□□□ -0.79
CXCL12-206ENST00000395795 CD164L2Q6UWJ8 174 aa10.14□□□□□ -0.79
CXCL12-206ENST00000395795 BTF3L4Q96K17 158 aa10.14□□□□□ -0.79
CXCL12-206ENST00000395795 CSDC2Q9Y534 153 aaKnown RBP10.14□□□□□ -0.79
CXCL12-206ENST00000395795 TNXBP22105 4242 aa10.13□□□□□ -0.79
CXCL12-206ENST00000395795 TRBV24-1A0A075B6N3 115 aa10.13□□□□□ -0.79
CXCL12-206ENST00000395795 IGHV1-58A0A0C4DH39 117 aa10.13□□□□□ -0.79
CXCL12-206ENST00000395795 IGKV2-24A0A0C4DH68 120 aa10.13□□□□□ -0.79
CXCL12-206ENST00000395795 Q6ZRU5 148 aa10.13□□□□□ -0.79
CXCL12-206ENST00000395795 IMMP2LQ96T52 175 aa10.13□□□□□ -0.79
CXCL12-206ENST00000395795 RPS10P5Q9NQ39 176 aa10.13□□□□□ -0.79
CXCL12-206ENST00000395795 A0A1B0GXF2 115 aa10.12□□□□□ -0.79
CXCL12-206ENST00000395795 RPL32P62910 135 aaKnown RBP10.12□□□□□ -0.79
CXCL12-206ENST00000395795 MAJINQ3KP22 176 aa10.12□□□□□ -0.79
CXCL12-206ENST00000395795 RNASE13Q5GAN3 156 aaKnown RBP10.12□□□□□ -0.79
CXCL12-206ENST00000395795 SERTAD4-AS1Q5TG53 156 aa10.12□□□□□ -0.79
CXCL12-206ENST00000395795 SS18Q15532 418 aa10.11□□□□□ -0.79
CXCL12-206ENST00000395795 Q6ZUT4 128 aa10.11□□□□□ -0.79
CXCL12-206ENST00000395795 DPH3Q96FX2 82 aa10.11□□□□□ -0.79
CXCL12-206ENST00000395795 PPP1R17O96001 155 aa10.1□□□□□ -0.79
CXCL12-206ENST00000395795 CAMPP49913 170 aa10.1□□□□□ -0.79
CXCL12-206ENST00000395795 STPG4Q8N801 248 aa10.1□□□□□ -0.79
CXCL12-206ENST00000395795 C20orf78Q9BR46 151 aa10.1□□□□□ -0.79
CXCL12-206ENST00000395795 TIMM21Q9BVV7 248 aa10.1□□□□□ -0.79
CXCL12-206ENST00000395795 A0A1B0GW15 77 aa10.09□□□□□ -0.79
CXCL12-206ENST00000395795 FCER1GP30273 86 aa10.09□□□□□ -0.79
CXCL12-206ENST00000395795 PRR3P79522 188 aaKnown RBP10.09□□□□□ -0.79
CXCL12-206ENST00000395795 CARD19Q96LW7 228 aa10.09□□□□□ -0.79
CXCL12-206ENST00000395795 IGLV4-69A0A075B6H9 119 aa10.08□□□□□ -0.8
CXCL12-206ENST00000395795 C1orf196B1AJZ1 125 aa10.08□□□□□ -0.8
CXCL12-206ENST00000395795 TNFRSF6BO95407 300 aa10.08□□□□□ -0.8
CXCL12-206ENST00000395795 S100PP25815 95 aa10.08□□□□□ -0.8
CXCL12-206ENST00000395795 RPL39P62891 51 aaKnown RBP10.08□□□□□ -0.8
CXCL12-206ENST00000395795 SYCNQ0VAF6 134 aa10.08□□□□□ -0.8
CXCL12-206ENST00000395795 TRAV9-1A0A075B6T8 112 aa10.07□□□□□ -0.8
CXCL12-206ENST00000395795 NPYP01303 97 aa10.07□□□□□ -0.8
CXCL12-206ENST00000395795 S100A8P05109 93 aa10.07□□□□□ -0.8
CXCL12-206ENST00000395795 MRPL54Q6P161 138 aaKnown RBP10.07□□□□□ -0.8
CXCL12-206ENST00000395795 ATP5L2Q7Z4Y8 100 aa10.07□□□□□ -0.8
CXCL12-206ENST00000395795 KIR2DL4Q99706 377 aa10.07□□□□□ -0.8
CXCL12-206ENST00000395795 TRAV13-1A0A0B4J241 112 aa10.06□□□□□ -0.8
CXCL12-206ENST00000395795 D6R8Y8 96 aa10.06□□□□□ -0.8
CXCL12-206ENST00000395795 CKS2P33552 79 aa10.06□□□□□ -0.8
CXCL12-206ENST00000395795 OPRPNQ99935 248 aaPredicted RBP10.06□□□□□ -0.8
CXCL12-206ENST00000395795 SMIM2Q9BVW6 85 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms