RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 A8MWL6 223 aa3.85□□□□□ -1.79
SMARCAD1-203ENST00000394961 K7EN84 100 aa3.85□□□□□ -1.79
SMARCAD1-203ENST00000394961 MRPS36P82909 103 aaKnown RBP3.85□□□□□ -1.79
SMARCAD1-203ENST00000394961 SMIM15Q7Z3B0 74 aa3.85□□□□□ -1.79
SMARCAD1-203ENST00000394961 GTSF1Q8WW33 167 aa3.85□□□□□ -1.79
SMARCAD1-203ENST00000394961 OSTCQ9NRP0 149 aa3.85□□□□□ -1.79
SMARCAD1-203ENST00000394961 PRSS47A8MTI9 375 aa3.85□□□□□ -1.79
SMARCAD1-203ENST00000394961 MGPP08493 103 aa3.85□□□□□ -1.79
SMARCAD1-203ENST00000394961 FAM19A3Q7Z5A8 133 aa3.85□□□□□ -1.79
SMARCAD1-203ENST00000394961 CARD19Q96LW7 228 aa3.85□□□□□ -1.79
SMARCAD1-203ENST00000394961 GNG13Q9P2W3 67 aa3.85□□□□□ -1.79
SMARCAD1-203ENST00000394961 A0A096LNI7 61 aa3.85□□□□□ -1.79
SMARCAD1-203ENST00000394961 NUP35Q8NFH5 326 aa3.85□□□□□ -1.79
SMARCAD1-203ENST00000394961 TMEM101Q96IK0 257 aa3.85□□□□□ -1.79
SMARCAD1-203ENST00000394961 IGLV4-69A0A075B6H9 119 aa3.84□□□□□ -1.79
SMARCAD1-203ENST00000394961 RAB19A4D1S5 217 aa3.84□□□□□ -1.79
SMARCAD1-203ENST00000394961 SS18Q15532 418 aa3.84□□□□□ -1.79
SMARCAD1-203ENST00000394961 C20orf78Q9BR46 151 aa3.84□□□□□ -1.79
SMARCAD1-203ENST00000394961 MRPL35Q9NZE8 188 aaKnown RBP3.84□□□□□ -1.79
SMARCAD1-203ENST00000394961 PSORS1C2Q9UIG4 136 aa3.84□□□□□ -1.79
SMARCAD1-203ENST00000394961 IGLV1-50A0A075B6I6 118 aa3.84□□□□□ -1.8
SMARCAD1-203ENST00000394961 TRBV24-1A0A075B6N3 115 aa3.84□□□□□ -1.8
SMARCAD1-203ENST00000394961 SDHAF1A6NFY7 115 aa3.84□□□□□ -1.8
SMARCAD1-203ENST00000394961 BLOC1S1P78537 153 aa3.84□□□□□ -1.8
SMARCAD1-203ENST00000394961 FAM74A3Q4VXF1 159 aa3.84□□□□□ -1.8
SMARCAD1-203ENST00000394961 PRSS3P2Q8NHM4 247 aa3.83□□□□□ -1.8
SMARCAD1-203ENST00000394961 OCC1Q8TAD7 63 aa3.83□□□□□ -1.8
SMARCAD1-203ENST00000394961 LINC00526Q96FQ7 95 aa3.83□□□□□ -1.8
SMARCAD1-203ENST00000394961 ST20Q9HBF5 79 aa3.83□□□□□ -1.8
SMARCAD1-203ENST00000394961 MED9Q9NWA0 146 aa3.83□□□□□ -1.8
SMARCAD1-203ENST00000394961 SYCNQ0VAF6 134 aa3.83□□□□□ -1.8
SMARCAD1-203ENST00000394961 TWIST1Q15672 202 aa3.83□□□□□ -1.8
SMARCAD1-203ENST00000394961 NRACQ8N912 160 aa3.83□□□□□ -1.8
SMARCAD1-203ENST00000394961 SMDT1Q9H4I9 107 aa3.83□□□□□ -1.8
SMARCAD1-203ENST00000394961 UBE2D4Q9Y2X8 147 aa3.83□□□□□ -1.8
SMARCAD1-203ENST00000394961 LINC00862A6NCI5 91 aa3.83□□□□□ -1.8
SMARCAD1-203ENST00000394961 CAMPP49913 170 aa3.83□□□□□ -1.8
SMARCAD1-203ENST00000394961 COX6A2Q02221 97 aa3.83□□□□□ -1.8
SMARCAD1-203ENST00000394961 STPG4Q8N801 248 aa3.83□□□□□ -1.8
SMARCAD1-203ENST00000394961 VCYO14598 125 aa3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 GATCO43716 136 aaKnown RBP3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 CHTF8P0CG12 524 aa3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 RAB4AP20338 218 aa3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 AMMECR1LQ6DCA0 310 aa3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 TMEM18Q96B42 140 aa3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 C1orf196B1AJZ1 125 aa3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 CEBPGP53567 150 aa3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 MAJINQ3KP22 176 aa3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 CLPSL2Q6UWE3 100 aa3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 BTF3L4Q96K17 158 aa3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 SPANXA1Q9NS26 97 aa3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 A0A1B0GUT8 65 aa3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 APOMO95445 188 aa3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 RPL39LQ96EH5 51 aaKnown RBP3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 PYGO1Q9Y3Y4 419 aa3.82□□□□□ -1.8
SMARCAD1-203ENST00000394961 C7orf77A4D0Y5 90 aa3.81□□□□□ -1.8
SMARCAD1-203ENST00000394961 SMLR1H3BR10 107 aa3.81□□□□□ -1.8
SMARCAD1-203ENST00000394961 PMCHP20382 165 aa3.81□□□□□ -1.8
SMARCAD1-203ENST00000394961 BORCS7Q96B45 105 aa3.81□□□□□ -1.8
SMARCAD1-203ENST00000394961 TMEM241Q24JQ0 296 aa3.81□□□□□ -1.8
SMARCAD1-203ENST00000394961 LINC01551Q86U37 167 aa3.81□□□□□ -1.8
SMARCAD1-203ENST00000394961 FAM104AQ969W3 186 aa3.81□□□□□ -1.8
SMARCAD1-203ENST00000394961 TRBV30A0A0K0K1B3 111 aa3.8□□□□□ -1.8
SMARCAD1-203ENST00000394961 SMIM27A0A1W2PRY6 76 aa3.8□□□□□ -1.8
SMARCAD1-203ENST00000394961 K7EMI3 77 aa3.8□□□□□ -1.8
SMARCAD1-203ENST00000394961 COX7A2LO14548 114 aa3.8□□□□□ -1.8
SMARCAD1-203ENST00000394961 NUPR1O60356 82 aa3.8□□□□□ -1.8
SMARCAD1-203ENST00000394961 RIGQ13278 110 aa3.8□□□□□ -1.8
SMARCAD1-203ENST00000394961 V9GYV3 84 aa3.8□□□□□ -1.8
SMARCAD1-203ENST00000394961 FLG2Q5D862 2391 aaPredicted RBP3.8□□□□□ -1.8
SMARCAD1-203ENST00000394961 RNASE7Q9H1E1 156 aaKnown RBP3.8□□□□□ -1.8
SMARCAD1-203ENST00000394961 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.8□□□□□ -1.8
SMARCAD1-203ENST00000394961 IGKV2-29A2NJV5 120 aaPredicted RBP3.8□□□□□ -1.8
SMARCAD1-203ENST00000394961 DIRC1Q969H9 104 aa3.8□□□□□ -1.8
SMARCAD1-203ENST00000394961 TMEM242Q9NWH2 141 aa3.8□□□□□ -1.8
SMARCAD1-203ENST00000394961 LAMTOR2Q9Y2Q5 125 aa3.8□□□□□ -1.8
SMARCAD1-203ENST00000394961 MUC21A0A0G2JKD1 596 aa3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 MUC21A0A140T8X8 626 aa3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 H0Y9J4 135 aa3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 SUMO2P61956 95 aaKnown RBP3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 IMMP2LQ96T52 175 aa3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 IGHV3OR16-9A0A0B4J2B5 98 aa3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 ZNF561-AS1K7EIQ3 104 aa3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 PPBPP02775 128 aa3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 IGLV7-43P04211 117 aa3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 RPL13AP40429 203 aaKnown RBP3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 TP73-AS1Q9UF72 201 aa3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 MUC17Q685J3 4493 aa3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 A0A1B0GXF2 115 aa3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 S100A8P05109 93 aa3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 SRP19P09132 144 aaKnown RBP3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 HIGD2BQ4VC39 106 aa3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 FAM104BQ5XKR9 115 aa3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 NAT8BQ9UHF3 227 aa3.79□□□□□ -1.8
SMARCAD1-203ENST00000394961 TRAV26-2A0A0B4J265 109 aa3.78□□□□□ -1.8
SMARCAD1-203ENST00000394961 ATP5L2Q7Z4Y8 100 aa3.78□□□□□ -1.8
SMARCAD1-203ENST00000394961 KRTAP1-4P0C5Y4 121 aa3.78□□□□□ -1.8
SMARCAD1-203ENST00000394961 RNASEKQ6P5S7 137 aaKnown RBP3.78□□□□□ -1.8
SMARCAD1-203ENST00000394961 A0A087WZ39 114 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms