RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 ATP5EP56381 51 aaPredicted RBP12.84□□□□□ -0.35
SIN3A-203ENST00000394949 ESM1Q9NQ30 184 aa12.84□□□□□ -0.35
SIN3A-203ENST00000394949 BPY2O14599 106 aa12.84□□□□□ -0.35
SIN3A-203ENST00000394949 DNAJC9-AS1A6NH13 148 aa12.83□□□□□ -0.36
SIN3A-203ENST00000394949 NDUFC1O43677 76 aa12.83□□□□□ -0.36
SIN3A-203ENST00000394949 C11orf21Q9P2W6 132 aa12.83□□□□□ -0.36
SIN3A-203ENST00000394949 RNASE3P12724 160 aaKnown RBP12.83□□□□□ -0.36
SIN3A-203ENST00000394949 DSCAMO60469 2012 aa12.82□□□□□ -0.36
SIN3A-203ENST00000394949 NDUFC2-KCTD14E9PQ53 114 aa12.82□□□□□ -0.36
SIN3A-203ENST00000394949 TSHBP01222 138 aa12.82□□□□□ -0.36
SIN3A-203ENST00000394949 USP17L23D6RBM5 183 aa12.82□□□□□ -0.36
SIN3A-203ENST00000394949 ENHOQ6UWT2 76 aa12.82□□□□□ -0.36
SIN3A-203ENST00000394949 UBE2D1P51668 147 aa12.81□□□□□ -0.36
SIN3A-203ENST00000394949 Q6ZS46 218 aa12.81□□□□□ -0.36
SIN3A-203ENST00000394949 C19orf84I3L1E1 186 aa12.8□□□□□ -0.36
SIN3A-203ENST00000394949 PIK3CD-AS1Q5SR53 167 aa12.8□□□□□ -0.36
SIN3A-203ENST00000394949 C22orf34Q6ZV56 151 aa12.8□□□□□ -0.36
SIN3A-203ENST00000394949 CLUHP3Q96NS8 147 aa12.8□□□□□ -0.36
SIN3A-203ENST00000394949 FAM110AQ9BQ89 295 aa12.8□□□□□ -0.36
SIN3A-203ENST00000394949 Q6ZTI0 123 aa12.79□□□□□ -0.36
SIN3A-203ENST00000394949 HCFC1P51610 2035 aa12.79□□□□□ -0.36
SIN3A-203ENST00000394949 KIAA1549Q9HCM3 1950 aa12.79□□□□□ -0.36
SIN3A-203ENST00000394949 F8W735 103 aaPredicted RBP12.79□□□□□ -0.36
SIN3A-203ENST00000394949 ATG2AQ2TAZ0 1938 aa12.78□□□□□ -0.36
SIN3A-203ENST00000394949 KLLNB2CW77 178 aa12.78□□□□□ -0.36
SIN3A-203ENST00000394949 Q8N6K4 173 aa12.78□□□□□ -0.36
SIN3A-203ENST00000394949 GAS8-AS1O95177 125 aa12.78□□□□□ -0.36
SIN3A-203ENST00000394949 MRPS36P82909 103 aaKnown RBP12.78□□□□□ -0.36
SIN3A-203ENST00000394949 Q6YL49 198 aa12.78□□□□□ -0.36
SIN3A-203ENST00000394949 KLK12Q9UKR0 248 aa12.78□□□□□ -0.36
SIN3A-203ENST00000394949 UBE2D3P61077 147 aa12.77□□□□□ -0.36
SIN3A-203ENST00000394949 UBE2D2P62837 147 aa12.77□□□□□ -0.36
SIN3A-203ENST00000394949 IGIPA6NJ69 53 aa12.77□□□□□ -0.37
SIN3A-203ENST00000394949 IGHV4-31P0DP07 118 aa12.76□□□□□ -0.37
SIN3A-203ENST00000394949 COX8CQ7Z4L0 72 aa12.76□□□□□ -0.37
SIN3A-203ENST00000394949 Q6JHZ5 121 aa12.76□□□□□ -0.37
SIN3A-203ENST00000394949 C9orf85Q96MD7 179 aa12.76□□□□□ -0.37
SIN3A-203ENST00000394949 SLPIP03973 132 aa12.76□□□□□ -0.37
SIN3A-203ENST00000394949 PRR9Q5T870 116 aa12.76□□□□□ -0.37
SIN3A-203ENST00000394949 DEFB4AO15263 64 aa12.75□□□□□ -0.37
SIN3A-203ENST00000394949 MUC22E2RYF6 1773 aaPredicted RBP12.75□□□□□ -0.37
SIN3A-203ENST00000394949 CHKB-CPT1BH3BT56 60 aa12.75□□□□□ -0.37
SIN3A-203ENST00000394949 KLK5Q9Y337 293 aaPredicted RBP12.74□□□□□ -0.37
SIN3A-203ENST00000394949 C10orf142B7Z368 130 aa12.74□□□□□ -0.37
SIN3A-203ENST00000394949 TRBV6-4A0A1B0GX49 114 aa12.74□□□□□ -0.37
SIN3A-203ENST00000394949 UBE2D4Q9Y2X8 147 aa12.74□□□□□ -0.37
SIN3A-203ENST00000394949 CRYGDP07320 174 aa12.73□□□□□ -0.37
SIN3A-203ENST00000394949 REG3AQ06141 175 aa12.73□□□□□ -0.37
SIN3A-203ENST00000394949 SMIM9A6NGZ8 99 aa12.73□□□□□ -0.37
SIN3A-203ENST00000394949 DEFB114Q30KQ6 69 aa12.73□□□□□ -0.37
SIN3A-203ENST00000394949 JMJD1CQ15652 2540 aa12.73□□□□□ -0.37
SIN3A-203ENST00000394949 PSMG3-AS1Q96PY0 264 aa12.73□□□□□ -0.37
SIN3A-203ENST00000394949 PRB2P02812 416 aaPredicted RBP12.72□□□□□ -0.37
SIN3A-203ENST00000394949 A0A096LNJ9 63 aa12.72□□□□□ -0.37
SIN3A-203ENST00000394949 CHCHD10Q8WYQ3 142 aaPredicted RBP12.72□□□□□ -0.37
SIN3A-203ENST00000394949 ZFYVE26Q68DK2 2539 aa12.72□□□□□ -0.37
SIN3A-203ENST00000394949 TRBV6-8A0A0A6YYG3 113 aa12.72□□□□□ -0.37
SIN3A-203ENST00000394949 LINC00269Q8N2A0 174 aa12.72□□□□□ -0.37
SIN3A-203ENST00000394949 C11orf71Q6IPW1 123 aa12.71□□□□□ -0.37
SIN3A-203ENST00000394949 WFDC11Q8NEX6 87 aa12.71□□□□□ -0.37
SIN3A-203ENST00000394949 A8MZ25 164 aa12.71□□□□□ -0.38
SIN3A-203ENST00000394949 C6orf99Q4VX62 202 aa12.7□□□□□ -0.38
SIN3A-203ENST00000394949 IL17DQ8TAD2 202 aa12.7□□□□□ -0.38
SIN3A-203ENST00000394949 MPLKIPQ8TAP9 179 aa12.7□□□□□ -0.38
SIN3A-203ENST00000394949 M0QXV9 152 aa12.7□□□□□ -0.38
SIN3A-203ENST00000394949 LINC00526Q96FQ7 95 aa12.69□□□□□ -0.38
SIN3A-203ENST00000394949 V9GYY9 64 aa12.69□□□□□ -0.38
SIN3A-203ENST00000394949 LYRM9A8MSI8 78 aa12.69□□□□□ -0.38
SIN3A-203ENST00000394949 PROK1P58294 105 aa12.68□□□□□ -0.38
SIN3A-203ENST00000394949 IGLV4-69A0A075B6H9 119 aa12.67□□□□□ -0.38
SIN3A-203ENST00000394949 UBE2AP49459 152 aa12.67□□□□□ -0.38
SIN3A-203ENST00000394949 SMIM11BQ8TCY0 68 aa12.67□□□□□ -0.38
SIN3A-203ENST00000394949 LINC00694P0DN24 101 aa12.67□□□□□ -0.38
SIN3A-203ENST00000394949 POM121L12Q8N7R1 296 aa12.67□□□□□ -0.38
SIN3A-203ENST00000394949 C11orf45Q8TAV5 145 aa12.67□□□□□ -0.38
SIN3A-203ENST00000394949 Q6ZSV7 163 aa12.66□□□□□ -0.38
SIN3A-203ENST00000394949 USP9XQ93008 2570 aaPredicted RBP12.66□□□□□ -0.38
SIN3A-203ENST00000394949 TLN2Q9Y4G6 2542 aa12.66□□□□□ -0.38
SIN3A-203ENST00000394949 SCXQ7RTU7 201 aa12.65□□□□□ -0.38
SIN3A-203ENST00000394949 MUC7Q8TAX7 377 aa12.65□□□□□ -0.38
SIN3A-203ENST00000394949 FAM19A3Q7Z5A8 133 aa12.64□□□□□ -0.39
SIN3A-203ENST00000394949 MRPL55Q7Z7F7 128 aaKnown RBP12.64□□□□□ -0.39
SIN3A-203ENST00000394949 MRGPRG-AS1Q2M3A8 158 aa12.63□□□□□ -0.39
SIN3A-203ENST00000394949 C14orf177Q52M58 125 aa12.63□□□□□ -0.39
SIN3A-203ENST00000394949 SMIM26A0A096LP01 95 aa12.63□□□□□ -0.39
SIN3A-203ENST00000394949 IGLV2-18A0A075B6J9 118 aa12.63□□□□□ -0.39
SIN3A-203ENST00000394949 ABCA12Q86UK0 2595 aa12.63□□□□□ -0.39
SIN3A-203ENST00000394949 CCKP06307 115 aa12.62□□□□□ -0.39
SIN3A-203ENST00000394949 CRIP2P52943 208 aaPredicted RBP12.62□□□□□ -0.39
SIN3A-203ENST00000394949 DCANP1Q8TF63 244 aa12.62□□□□□ -0.39
SIN3A-203ENST00000394949 CD164L2Q6UWJ8 174 aa12.61□□□□□ -0.39
SIN3A-203ENST00000394949 ZNF843Q8N446 348 aa12.61□□□□□ -0.39
SIN3A-203ENST00000394949 PRRC2AP48634 2157 aaKnown RBP12.61□□□□□ -0.39
SIN3A-203ENST00000394949 COX17Q14061 63 aa12.61□□□□□ -0.39
SIN3A-203ENST00000394949 H0Y9J4 135 aa12.61□□□□□ -0.39
SIN3A-203ENST00000394949 RPL28P46779 137 aaKnown RBP12.61□□□□□ -0.39
SIN3A-203ENST00000394949 Q6ZQY7 126 aa12.61□□□□□ -0.39
SIN3A-203ENST00000394949 TSPEAR-AS2P59090 65 aa12.6□□□□□ -0.39
SIN3A-203ENST00000394949 SHISA2Q6UWI4 295 aa12.6□□□□□ -0.39
SIN3A-203ENST00000394949 EML5Q05BV3 1969 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms