RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 SMCPP49901 116 aaPredicted RBP7.69□□□□□ -1.18
ACTN1-203ENST00000394419 DEFB113Q30KQ7 82 aa7.69□□□□□ -1.18
ACTN1-203ENST00000394419 TEN1Q86WV5 123 aa7.69□□□□□ -1.18
ACTN1-203ENST00000394419 TMEM89A2RUT3 159 aa7.69□□□□□ -1.18
ACTN1-203ENST00000394419 RPL36AP83881 106 aaKnown RBP7.69□□□□□ -1.18
ACTN1-203ENST00000394419 RPL36ALQ969Q0 106 aaKnown RBP7.69□□□□□ -1.18
ACTN1-203ENST00000394419 IGHV3-33P01772 117 aa7.69□□□□□ -1.18
ACTN1-203ENST00000394419 PRO0461Q9UI25 63 aa7.69□□□□□ -1.18
ACTN1-203ENST00000394419 ATXN8Q156A1 80 aa7.68□□□□□ -1.18
ACTN1-203ENST00000394419 DEFB114Q30KQ6 69 aa7.68□□□□□ -1.18
ACTN1-203ENST00000394419 C2orf82Q6UX34 121 aa7.68□□□□□ -1.18
ACTN1-203ENST00000394419 BBC3Q96PG8 261 aaPredicted RBP7.68□□□□□ -1.18
ACTN1-203ENST00000394419 YAE1D1Q9NRH1 226 aa7.68□□□□□ -1.18
ACTN1-203ENST00000394419 MT-ATP8P03928 68 aa7.68□□□□□ -1.18
ACTN1-203ENST00000394419 Q6ZTI0 123 aa7.68□□□□□ -1.18
ACTN1-203ENST00000394419 PRIMA1Q86XR5 153 aa7.68□□□□□ -1.18
ACTN1-203ENST00000394419 POM121L12Q8N7R1 296 aa7.68□□□□□ -1.18
ACTN1-203ENST00000394419 Q9H8V8 135 aa7.68□□□□□ -1.18
ACTN1-203ENST00000394419 IGHV1-58A0A0C4DH39 117 aa7.68□□□□□ -1.18
ACTN1-203ENST00000394419 CLEC2BQ92478 149 aa7.68□□□□□ -1.18
ACTN1-203ENST00000394419 WFDC10AQ9H1F0 79 aa7.68□□□□□ -1.18
ACTN1-203ENST00000394419 CCL24O00175 119 aa7.67□□□□□ -1.18
ACTN1-203ENST00000394419 RPL13AP40429 203 aaKnown RBP7.67□□□□□ -1.18
ACTN1-203ENST00000394419 ADAMTSL4-AS1Q5T5F5 129 aa7.67□□□□□ -1.18
ACTN1-203ENST00000394419 TRGV4A0A0C4DH28 118 aa7.67□□□□□ -1.18
ACTN1-203ENST00000394419 WFDC11Q8NEX6 87 aa7.67□□□□□ -1.18
ACTN1-203ENST00000394419 ANAPC13Q9BS18 74 aa7.67□□□□□ -1.18
ACTN1-203ENST00000394419 C11orf68Q9H3H3 251 aaKnown RBP7.67□□□□□ -1.18
ACTN1-203ENST00000394419 APCP25054 2843 aa7.67□□□□□ -1.18
ACTN1-203ENST00000394419 UBE2D3P61077 147 aa7.66□□□□□ -1.18
ACTN1-203ENST00000394419 UBE2D2P62837 147 aa7.66□□□□□ -1.18
ACTN1-203ENST00000394419 ITPR2Q14571 2701 aa7.66□□□□□ -1.18
ACTN1-203ENST00000394419 HELZ2Q9BYK8 2649 aaKnown RBP7.66□□□□□ -1.18
ACTN1-203ENST00000394419 CITED2Q99967 270 aaPredicted RBP7.66□□□□□ -1.18
ACTN1-203ENST00000394419 SPANXA1Q9NS26 97 aa7.66□□□□□ -1.18
ACTN1-203ENST00000394419 TRIAP1O43715 76 aa7.65□□□□□ -1.18
ACTN1-203ENST00000394419 DEFB130BP0DP73 79 aa7.65□□□□□ -1.18
ACTN1-203ENST00000394419 DEFB130AP0DP74 79 aa7.65□□□□□ -1.18
ACTN1-203ENST00000394419 C4orf3Q8WVX3 66 aa7.65□□□□□ -1.18
ACTN1-203ENST00000394419 VSIG2Q96IQ7 327 aa7.65□□□□□ -1.18
ACTN1-203ENST00000394419 UBE2D4Q9Y2X8 147 aa7.65□□□□□ -1.18
ACTN1-203ENST00000394419 SNCGO76070 127 aa7.65□□□□□ -1.18
ACTN1-203ENST00000394419 LINC01620Q4KN68 170 aa7.65□□□□□ -1.18
ACTN1-203ENST00000394419 TMEM101Q96IK0 257 aa7.65□□□□□ -1.18
ACTN1-203ENST00000394419 CHCHD5Q9BSY4 110 aa7.65□□□□□ -1.18
ACTN1-203ENST00000394419 TEX49A0A1B0GTD5 131 aa7.65□□□□□ -1.19
ACTN1-203ENST00000394419 TMEM262E9PQX1 116 aa7.65□□□□□ -1.19
ACTN1-203ENST00000394419 TMEM263Q8WUH6 116 aaKnown RBP7.65□□□□□ -1.19
ACTN1-203ENST00000394419 GAGE6Q13070 117 aa7.64□□□□□ -1.19
ACTN1-203ENST00000394419 AMELXQ99217 191 aa7.64□□□□□ -1.19
ACTN1-203ENST00000394419 ODF3L2Q3SX64 289 aa7.64□□□□□ -1.19
ACTN1-203ENST00000394419 CARD19Q96LW7 228 aa7.64□□□□□ -1.19
ACTN1-203ENST00000394419 CHCHD7Q9BUK0 85 aa7.64□□□□□ -1.19
ACTN1-203ENST00000394419 ICOSQ9Y6W8 199 aa7.64□□□□□ -1.19
ACTN1-203ENST00000394419 DNAJC9-AS1A6NH13 148 aa7.64□□□□□ -1.19
ACTN1-203ENST00000394419 PLA2G2AP14555 144 aa7.64□□□□□ -1.19
ACTN1-203ENST00000394419 XGP55808 180 aa7.64□□□□□ -1.19
ACTN1-203ENST00000394419 MRPS36P82909 103 aaKnown RBP7.64□□□□□ -1.19
ACTN1-203ENST00000394419 LINC00694P0DN24 101 aa7.63□□□□□ -1.19
ACTN1-203ENST00000394419 TEX29Q8N6K0 151 aa7.63□□□□□ -1.19
ACTN1-203ENST00000394419 TRAV8-4A0A0B4J246 113 aa7.63□□□□□ -1.19
ACTN1-203ENST00000394419 COX6A2Q02221 97 aa7.63□□□□□ -1.19
ACTN1-203ENST00000394419 SPATA25Q9BR10 227 aa7.63□□□□□ -1.19
ACTN1-203ENST00000394419 PYGO1Q9Y3Y4 419 aa7.63□□□□□ -1.19
ACTN1-203ENST00000394419 A0A096LPF7 62 aa7.62□□□□□ -1.19
ACTN1-203ENST00000394419 TINCRA0A1B0GVN0 87 aa7.62□□□□□ -1.19
ACTN1-203ENST00000394419 C3orf56Q8N813 242 aa7.62□□□□□ -1.19
ACTN1-203ENST00000394419 A0A0B4J2C4 111 aa7.62□□□□□ -1.19
ACTN1-203ENST00000394419 LOC100131303A0A0U1RQF7 123 aa7.62□□□□□ -1.19
ACTN1-203ENST00000394419 MIAQ16674 131 aa7.62□□□□□ -1.19
ACTN1-203ENST00000394419 SETXQ7Z333 2677 aaKnown RBP7.62□□□□□ -1.19
ACTN1-203ENST00000394419 ZNF843Q8N446 348 aa7.61□□□□□ -1.19
ACTN1-203ENST00000394419 UBE2WQ96B02 151 aa7.61□□□□□ -1.19
ACTN1-203ENST00000394419 LINC00158P58513 81 aa7.61□□□□□ -1.19
ACTN1-203ENST00000394419 TTC32Q5I0X7 151 aa7.61□□□□□ -1.19
ACTN1-203ENST00000394419 OR13C6PQ8NH95 151 aa7.61□□□□□ -1.19
ACTN1-203ENST00000394419 K7EQD1 137 aa7.61□□□□□ -1.19
ACTN1-203ENST00000394419 PFN2P35080 140 aa7.61□□□□□ -1.19
ACTN1-203ENST00000394419 HERVK_113P63121 156 aa7.61□□□□□ -1.19
ACTN1-203ENST00000394419 GAGE2BQ13066 116 aa7.61□□□□□ -1.19
ACTN1-203ENST00000394419 GAGE2EQ4V326 116 aa7.61□□□□□ -1.19
ACTN1-203ENST00000394419 ZFAND6Q6FIF0 208 aa7.61□□□□□ -1.19
ACTN1-203ENST00000394419 C1orf158Q8N1D5 194 aa7.61□□□□□ -1.19
ACTN1-203ENST00000394419 ATP6V0E2Q8NHE4 81 aa7.61□□□□□ -1.19
ACTN1-203ENST00000394419 GAGE2DQ9UEU5 116 aa7.61□□□□□ -1.19
ACTN1-203ENST00000394419 A0A096LNT2 108 aa7.6□□□□□ -1.19
ACTN1-203ENST00000394419 CLPSL2Q6UWE3 100 aa7.6□□□□□ -1.19
ACTN1-203ENST00000394419 DNAJC30Q96LL9 226 aa7.6□□□□□ -1.19
ACTN1-203ENST00000394419 TMEM243Q9BU79 118 aa7.6□□□□□ -1.19
ACTN1-203ENST00000394419 EIF4EBP3O60516 100 aaPredicted RBP7.6□□□□□ -1.19
ACTN1-203ENST00000394419 C11orf72Q8NBR9 251 aa7.6□□□□□ -1.19
ACTN1-203ENST00000394419 CDIP1Q9H305 208 aa7.6□□□□□ -1.19
ACTN1-203ENST00000394419 PF4P02776 101 aa7.59□□□□□ -1.19
ACTN1-203ENST00000394419 PIK3CD-AS1Q5SR53 167 aa7.59□□□□□ -1.19
ACTN1-203ENST00000394419 C5orf38Q86SI9 138 aa7.59□□□□□ -1.19
ACTN1-203ENST00000394419 ATRQ13535 2644 aa7.59□□□□□ -1.19
ACTN1-203ENST00000394419 RS1O15537 224 aa7.59□□□□□ -1.19
ACTN1-203ENST00000394419 FHL3Q13643 280 aa7.59□□□□□ -1.19
ACTN1-203ENST00000394419 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.58□□□□□ -1.2
ACTN1-203ENST00000394419 CRLF1O75462 422 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 299.7 ms