RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 IGHV3-74A0A0B4J1X5 117 aa16■□□□□ 0.15
CLDND1-202ENST00000394180 ZNF580Q9UK33 172 aa16■□□□□ 0.15
CLDND1-202ENST00000394180 ABCA2Q9BZC7 2435 aa16■□□□□ 0.15
CLDND1-202ENST00000394180 BAALC-AS2P0C853 105 aa16■□□□□ 0.15
CLDND1-202ENST00000394180 TIRAPP58753 221 aa16■□□□□ 0.15
CLDND1-202ENST00000394180 CCDC168Q8NDH2 2452 aa16■□□□□ 0.15
CLDND1-202ENST00000394180 F5H768 121 aa15.99■□□□□ 0.15
CLDND1-202ENST00000394180 NDUFA1O15239 70 aa15.99■□□□□ 0.15
CLDND1-202ENST00000394180 MUC4Q99102 2169 aa15.99■□□□□ 0.15
CLDND1-202ENST00000394180 TRAV41A0A0B4J266 112 aa15.98■□□□□ 0.15
CLDND1-202ENST00000394180 DEFB113Q30KQ7 82 aa15.98■□□□□ 0.15
CLDND1-202ENST00000394180 A0A087WWL8 130 aa15.98■□□□□ 0.15
CLDND1-202ENST00000394180 RPL11P62913 178 aaKnown RBP15.98■□□□□ 0.15
CLDND1-202ENST00000394180 IGHV3OR16-10A0A075B7F0 116 aa15.97■□□□□ 0.15
CLDND1-202ENST00000394180 ADARB2-AS1A8MUL3 147 aa15.97■□□□□ 0.15
CLDND1-202ENST00000394180 CD28P10747 220 aa15.97■□□□□ 0.15
CLDND1-202ENST00000394180 Q6ZSV7 163 aa15.97■□□□□ 0.15
CLDND1-202ENST00000394180 OVOL2Q9BRP0 275 aa15.97■□□□□ 0.15
CLDND1-202ENST00000394180 JPT2Q9H910 190 aa15.97■□□□□ 0.15
CLDND1-202ENST00000394180 IGHV3-49A0A0A0MS15 119 aa15.96■□□□□ 0.15
CLDND1-202ENST00000394180 FAM223BA6NKX1 122 aa15.96■□□□□ 0.15
CLDND1-202ENST00000394180 FAM223AQ8IWN6 122 aa15.96■□□□□ 0.15
CLDND1-202ENST00000394180 KIR2DL5BQ8NHK3 375 aa15.96■□□□□ 0.15
CLDND1-202ENST00000394180 ECSCRQ19T08 205 aa15.95■□□□□ 0.14
CLDND1-202ENST00000394180 C22orf24Q9Y442 160 aa15.95■□□□□ 0.14
CLDND1-202ENST00000394180 AKAP9Q99996 3911 aa15.95■□□□□ 0.14
CLDND1-202ENST00000394180 ATP6V0E1O15342 81 aa15.95■□□□□ 0.14
CLDND1-202ENST00000394180 NDUFA4O00483 81 aa15.94■□□□□ 0.14
CLDND1-202ENST00000394180 Q5XG85 94 aa15.94■□□□□ 0.14
CLDND1-202ENST00000394180 FAM104AQ969W3 186 aa15.94■□□□□ 0.14
CLDND1-202ENST00000394180 MAPK1IP1LQ8NDC0 245 aa15.94■□□□□ 0.14
CLDND1-202ENST00000394180 LINC00308Q8TCZ7 52 aa15.94■□□□□ 0.14
CLDND1-202ENST00000394180 PRRC2AP48634 2157 aaKnown RBP15.93■□□□□ 0.14
CLDND1-202ENST00000394180 IGHV3-16A0A0C4DH30 117 aa15.92■□□□□ 0.14
CLDND1-202ENST00000394180 PF4P02776 101 aa15.92■□□□□ 0.14
CLDND1-202ENST00000394180 DSCR9P59020 149 aa15.92■□□□□ 0.14
CLDND1-202ENST00000394180 IGLV5-45A0A087WSX0 123 aa15.91■□□□□ 0.14
CLDND1-202ENST00000394180 TRAV13-1A0A0B4J241 112 aa15.91■□□□□ 0.14
CLDND1-202ENST00000394180 NDUFC2O95298 119 aa15.91■□□□□ 0.14
CLDND1-202ENST00000394180 NOTCH2Q04721 2471 aa15.9■□□□□ 0.14
CLDND1-202ENST00000394180 ITPR3Q14573 2671 aa15.89■□□□□ 0.13
CLDND1-202ENST00000394180 MALP21145 153 aa15.89■□□□□ 0.13
CLDND1-202ENST00000394180 KRTAP1-3Q8IUG1 177 aa15.89■□□□□ 0.13
CLDND1-202ENST00000394180 A0A096LNT2 108 aa15.88■□□□□ 0.13
CLDND1-202ENST00000394180 FAM74A4Q5TZK3 123 aa15.88■□□□□ 0.13
CLDND1-202ENST00000394180 DEFB104AQ8WTQ1 72 aa15.88■□□□□ 0.13
CLDND1-202ENST00000394180 OBSCN-AS1Q96MR7 158 aa15.88■□□□□ 0.13
CLDND1-202ENST00000394180 TEX15Q9BXT5 2789 aa15.87■□□□□ 0.13
CLDND1-202ENST00000394180 PRIMA1Q86XR5 153 aa15.87■□□□□ 0.13
CLDND1-202ENST00000394180 Q96MF0 132 aa15.87■□□□□ 0.13
CLDND1-202ENST00000394180 CYSTM1Q9H1C7 97 aa15.87■□□□□ 0.13
CLDND1-202ENST00000394180 CREBBPQ92793 2442 aa15.87■□□□□ 0.13
CLDND1-202ENST00000394180 OXTP01178 125 aa15.87■□□□□ 0.13
CLDND1-202ENST00000394180 NPC2P61916 151 aa15.87■□□□□ 0.13
CLDND1-202ENST00000394180 SIRPDQ9H106 197 aa15.87■□□□□ 0.13
CLDND1-202ENST00000394180 DNAL4O96015 105 aa15.86■□□□□ 0.13
CLDND1-202ENST00000394180 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.85■□□□□ 0.138e-7■■■■□ 21
CLDND1-202ENST00000394180 C4orf26Q17RF5 130 aa15.85■□□□□ 0.13
CLDND1-202ENST00000394180 SYNJ2BPP57105 145 aa15.84■□□□□ 0.13
CLDND1-202ENST00000394180 USP17L23D6RBM5 183 aa15.84■□□□□ 0.13
CLDND1-202ENST00000394180 RPL28P46779 137 aaKnown RBP15.84■□□□□ 0.13
CLDND1-202ENST00000394180 C19orf54Q5BKX5 351 aa15.84■□□□□ 0.13
CLDND1-202ENST00000394180 HIST2H2BDQ6DRA6 164 aa15.84■□□□□ 0.13
CLDND1-202ENST00000394180 WFDC11Q8NEX6 87 aa15.84■□□□□ 0.13
CLDND1-202ENST00000394180 IGLV5-39A0A0G2JS06 123 aa15.83■□□□□ 0.13
CLDND1-202ENST00000394180 MSMBP08118 114 aa15.83■□□□□ 0.13
CLDND1-202ENST00000394180 FLNAP21333 2647 aaKnown RBP15.83■□□□□ 0.12
CLDND1-202ENST00000394180 EPM2AB3EWF7 344 aa15.83■□□□□ 0.12
CLDND1-202ENST00000394180 DSCR8Q96T75 97 aa15.83■□□□□ 0.12
CLDND1-202ENST00000394180 FLNBO75369 2602 aaKnown RBP15.83■□□□□ 0.12
CLDND1-202ENST00000394180 TRAV12-3A0A0B4J271 114 aa15.82■□□□□ 0.12
CLDND1-202ENST00000394180 F6UB75 175 aa15.82■□□□□ 0.12
CLDND1-202ENST00000394180 G3V318 75 aa15.82■□□□□ 0.12
CLDND1-202ENST00000394180 CR1P17927 2039 aa15.82■□□□□ 0.12
CLDND1-202ENST00000394180 UBE2D4Q9Y2X8 147 aa15.82■□□□□ 0.12
CLDND1-202ENST00000394180 B4DSR2 109 aa15.81■□□□□ 0.12
CLDND1-202ENST00000394180 PSMB8P28062 276 aa15.81■□□□□ 0.12
CLDND1-202ENST00000394180 HRCT1Q6UXD1 115 aa15.81■□□□□ 0.12
CLDND1-202ENST00000394180 CSPG4Q6UVK1 2322 aa15.81■□□□□ 0.12
CLDND1-202ENST00000394180 ATP5EP2Q5VTU8 51 aa15.8■□□□□ 0.12
CLDND1-202ENST00000394180 PRO0628Q9UI54 55 aa15.8■□□□□ 0.12
CLDND1-202ENST00000394180 TRAV13-2A0A0B4J235 113 aa15.8■□□□□ 0.12
CLDND1-202ENST00000394180 S100A7L2Q5SY68 101 aa15.8■□□□□ 0.12
CLDND1-202ENST00000394180 RNF152Q8N8N0 203 aa15.8■□□□□ 0.12
CLDND1-202ENST00000394180 FAM19A3Q7Z5A8 133 aa15.79■□□□□ 0.12
CLDND1-202ENST00000394180 Q8N2B8 174 aa15.79■□□□□ 0.12
CLDND1-202ENST00000394180 TLN2Q9Y4G6 2542 aa15.79■□□□□ 0.12
CLDND1-202ENST00000394180 DEFB1P60022 68 aa15.79■□□□□ 0.12
CLDND1-202ENST00000394180 UNQ9165/PRO28630Q6UXU0 137 aa15.79■□□□□ 0.12
CLDND1-202ENST00000394180 LINC01561Q8N1V8 128 aa15.79■□□□□ 0.12
CLDND1-202ENST00000394180 MYO9AB2RTY4 2548 aa15.78■□□□□ 0.12
CLDND1-202ENST00000394180 IGHV1OR15-1A0A075B7D0 117 aa15.78■□□□□ 0.12
CLDND1-202ENST00000394180 H3BUA1 57 aa15.78■□□□□ 0.12
CLDND1-202ENST00000394180 PIK3CD-AS1Q5SR53 167 aa15.78■□□□□ 0.12
CLDND1-202ENST00000394180 BCE1O60756 84 aa15.78■□□□□ 0.12
CLDND1-202ENST00000394180 AVPP01185 164 aa15.77■□□□□ 0.12
CLDND1-202ENST00000394180 LINC01356Q8N9X3 169 aa15.77■□□□□ 0.12
CLDND1-202ENST00000394180 USMG5Q96IX5 58 aa15.77■□□□□ 0.12
CLDND1-202ENST00000394180 FAM218AQ96MZ4 157 aa15.77■□□□□ 0.12
CLDND1-202ENST00000394180 OTOGQ6ZRI0 2925 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms