RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 LYRM7Q5U5X0 104 aa9.98□□□□□ -0.81
CCDC142-202ENST00000393965 SLC25A29Q8N8R3 303 aa9.98□□□□□ -0.81
CCDC142-202ENST00000393965 RHODO00212 210 aa9.98□□□□□ -0.81
CCDC142-202ENST00000393965 ADAMTSL4-AS1Q5T5F5 129 aa9.98□□□□□ -0.81
CCDC142-202ENST00000393965 DYNLRB2Q8TF09 96 aa9.98□□□□□ -0.81
CCDC142-202ENST00000393965 ODF3Q96PU9 254 aa9.98□□□□□ -0.81
CCDC142-202ENST00000393965 I3L3M4 83 aa9.97□□□□□ -0.81
CCDC142-202ENST00000393965 C4orf3Q8WVX3 66 aa9.97□□□□□ -0.81
CCDC142-202ENST00000393965 IGLV4-3A0A075B6K6 122 aa9.97□□□□□ -0.81
CCDC142-202ENST00000393965 C2orf82Q6UX34 121 aa9.97□□□□□ -0.81
CCDC142-202ENST00000393965 OTOGQ6ZRI0 2925 aa9.97□□□□□ -0.81
CCDC142-202ENST00000393965 KRTAP1-1Q07627 177 aa9.97□□□□□ -0.81
CCDC142-202ENST00000393965 TEX29Q8N6K0 151 aa9.97□□□□□ -0.81
CCDC142-202ENST00000393965 CRLF1O75462 422 aa9.96□□□□□ -0.81
CCDC142-202ENST00000393965 SNCGO76070 127 aa9.96□□□□□ -0.81
CCDC142-202ENST00000393965 DEFB114Q30KQ6 69 aa9.96□□□□□ -0.81
CCDC142-202ENST00000393965 MEIG1Q5JSS6 88 aa9.96□□□□□ -0.81
CCDC142-202ENST00000393965 C20orf203Q8NBC4 194 aa9.96□□□□□ -0.81
CCDC142-202ENST00000393965 PAPPA-AS1Q5QFB9 102 aa9.96□□□□□ -0.82
CCDC142-202ENST00000393965 TRGV1A0A0A0MS02 117 aa9.95□□□□□ -0.82
CCDC142-202ENST00000393965 TRBV27A0A0K0K1C4 114 aa9.95□□□□□ -0.82
CCDC142-202ENST00000393965 SPATA25Q9BR10 227 aa9.95□□□□□ -0.82
CCDC142-202ENST00000393965 WFDC10AQ9H1F0 79 aa9.95□□□□□ -0.82
CCDC142-202ENST00000393965 A0A0J9YXY3 114 aa9.95□□□□□ -0.82
CCDC142-202ENST00000393965 TRIAP1O43715 76 aa9.95□□□□□ -0.82
CCDC142-202ENST00000393965 TRAV4A0A0B4J268 109 aa9.95□□□□□ -0.82
CCDC142-202ENST00000393965 TMEM141Q96I45 108 aa9.95□□□□□ -0.82
CCDC142-202ENST00000393965 IGHV3-33P01772 117 aa9.94□□□□□ -0.82
CCDC142-202ENST00000393965 CITED2Q99967 270 aaPredicted RBP9.94□□□□□ -0.82
CCDC142-202ENST00000393965 ODF3L2Q3SX64 289 aa9.94□□□□□ -0.82
CCDC142-202ENST00000393965 SMIM20Q8N5G0 67 aa9.94□□□□□ -0.82
CCDC142-202ENST00000393965 FLNBO75369 2602 aaKnown RBP9.94□□□□□ -0.82
CCDC142-202ENST00000393965 M0R2P5 195 aa9.94□□□□□ -0.82
CCDC142-202ENST00000393965 TMEM223A0PJW6 202 aa9.93□□□□□ -0.82
CCDC142-202ENST00000393965 ZFAND6Q6FIF0 208 aa9.93□□□□□ -0.82
CCDC142-202ENST00000393965 LINC00467Q9BRT7 94 aa9.93□□□□□ -0.82
CCDC142-202ENST00000393965 CDKN2A-AS1Q9UH64 79 aa9.93□□□□□ -0.82
CCDC142-202ENST00000393965 RPL13AP40429 203 aaKnown RBP9.93□□□□□ -0.82
CCDC142-202ENST00000393965 GAGE2BQ13066 116 aa9.93□□□□□ -0.82
CCDC142-202ENST00000393965 GAGE2EQ4V326 116 aa9.93□□□□□ -0.82
CCDC142-202ENST00000393965 FAM104AQ969W3 186 aa9.93□□□□□ -0.82
CCDC142-202ENST00000393965 GAGE2DQ9UEU5 116 aa9.93□□□□□ -0.82
CCDC142-202ENST00000393965 TIMM17AQ99595 171 aa9.92□□□□□ -0.82
CCDC142-202ENST00000393965 UBE2D3P61077 147 aa9.92□□□□□ -0.82
CCDC142-202ENST00000393965 UBE2D2P62837 147 aa9.92□□□□□ -0.82
CCDC142-202ENST00000393965 TRBV6-5A0A0K0K1A5 114 aa9.92□□□□□ -0.82
CCDC142-202ENST00000393965 GAGE12JA6NER3 117 aa9.92□□□□□ -0.82
CCDC142-202ENST00000393965 LEPROTO15243 131 aa9.92□□□□□ -0.82
CCDC142-202ENST00000393965 GAGE4Q13068 117 aa9.92□□□□□ -0.82
CCDC142-202ENST00000393965 GAGE5Q13069 117 aa9.92□□□□□ -0.82
CCDC142-202ENST00000393965 LINC01620Q4KN68 170 aa9.92□□□□□ -0.82
CCDC142-202ENST00000393965 PEMTQ9UBM1 199 aa9.92□□□□□ -0.82
CCDC142-202ENST00000393965 TRAV8-4A0A0B4J246 113 aa9.91□□□□□ -0.82
CCDC142-202ENST00000393965 C11orf72Q8NBR9 251 aa9.91□□□□□ -0.82
CCDC142-202ENST00000393965 TRGV11A0A075B6L2 103 aa9.91□□□□□ -0.82
CCDC142-202ENST00000393965 C15orf53Q8NAA6 179 aa9.91□□□□□ -0.82
CCDC142-202ENST00000393965 NSUN5P1Q3KNT7 163 aa9.9□□□□□ -0.82
CCDC142-202ENST00000393965 Q9H8V8 135 aa9.9□□□□□ -0.82
CCDC142-202ENST00000393965 TENM1Q9UKZ4 2725 aa9.9□□□□□ -0.82
CCDC142-202ENST00000393965 TRRAPQ9Y4A5 3859 aa9.9□□□□□ -0.82
CCDC142-202ENST00000393965 RPL35AP18077 110 aaKnown RBP9.9□□□□□ -0.82
CCDC142-202ENST00000393965 RPL32P62910 135 aaKnown RBP9.9□□□□□ -0.82
CCDC142-202ENST00000393965 ATXN8Q156A1 80 aa9.89□□□□□ -0.83
CCDC142-202ENST00000393965 A8MTW9 85 aa9.89□□□□□ -0.83
CCDC142-202ENST00000393965 CCL24O00175 119 aa9.89□□□□□ -0.83
CCDC142-202ENST00000393965 COX6CP09669 75 aa9.89□□□□□ -0.83
CCDC142-202ENST00000393965 TMEM263Q8WUH6 116 aaKnown RBP9.89□□□□□ -0.83
CCDC142-202ENST00000393965 AMELXQ99217 191 aa9.89□□□□□ -0.83
CCDC142-202ENST00000393965 LINC01006Q8NI28 216 aa9.88□□□□□ -0.83
CCDC142-202ENST00000393965 C1orf158Q8N1D5 194 aa9.88□□□□□ -0.83
CCDC142-202ENST00000393965 A0A096LPF7 62 aa9.88□□□□□ -0.83
CCDC142-202ENST00000393965 COX6A2Q02221 97 aa9.87□□□□□ -0.83
CCDC142-202ENST00000393965 PIK3CD-AS1Q5SR53 167 aa9.87□□□□□ -0.83
CCDC142-202ENST00000393965 PRIMA1Q86XR5 153 aa9.87□□□□□ -0.83
CCDC142-202ENST00000393965 ICOSQ9Y6W8 199 aa9.87□□□□□ -0.83
CCDC142-202ENST00000393965 CLPSL2Q6UWE3 100 aa9.87□□□□□ -0.83
CCDC142-202ENST00000393965 UBE2WQ96B02 151 aa9.87□□□□□ -0.83
CCDC142-202ENST00000393965 RNASE1P07998 156 aaKnown RBP9.86□□□□□ -0.83
CCDC142-202ENST00000393965 LINC00694P0DN24 101 aa9.86□□□□□ -0.83
CCDC142-202ENST00000393965 Q9HAA7 133 aa9.86□□□□□ -0.83
CCDC142-202ENST00000393965 CCDC179H3BU77 68 aa9.85□□□□□ -0.83
CCDC142-202ENST00000393965 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.85□□□□□ -0.83
CCDC142-202ENST00000393965 PFN2P35080 140 aa9.85□□□□□ -0.83
CCDC142-202ENST00000393965 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.85□□□□□ -0.83
CCDC142-202ENST00000393965 TRGV2A0A075B6R0 118 aa9.84□□□□□ -0.83
CCDC142-202ENST00000393965 LOC100131303A0A0U1RQF7 123 aa9.84□□□□□ -0.83
CCDC142-202ENST00000393965 ZNF415Q09FC8 603 aa9.84□□□□□ -0.83
CCDC142-202ENST00000393965 GAGE7O76087 117 aa9.84□□□□□ -0.83
CCDC142-202ENST00000393965 GAGE12FP0CL80 117 aa9.84□□□□□ -0.83
CCDC142-202ENST00000393965 GAGE12GP0CL81 117 aa9.84□□□□□ -0.83
CCDC142-202ENST00000393965 GAGE12IP0CL82 117 aa9.84□□□□□ -0.83
CCDC142-202ENST00000393965 HERV-K104P63124 156 aa9.84□□□□□ -0.83
CCDC142-202ENST00000393965 RHOHQ15669 191 aa9.84□□□□□ -0.83
CCDC142-202ENST00000393965 STHQ8IWL8 128 aa9.84□□□□□ -0.83
CCDC142-202ENST00000393965 CHCHD7Q9BUK0 85 aa9.84□□□□□ -0.83
CCDC142-202ENST00000393965 Q6ZTI0 123 aa9.84□□□□□ -0.83
CCDC142-202ENST00000393965 OR13C6PQ8NH95 151 aa9.84□□□□□ -0.83
CCDC142-202ENST00000393965 NOP10Q9NPE3 64 aaKnown RBP9.84□□□□□ -0.83
CCDC142-202ENST00000393965 INSP01308 110 aa9.83□□□□□ -0.84
CCDC142-202ENST00000393965 SPATA3Q8NHX4 192 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms