RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 H7C423 109 aa11.8□□□□□ -0.52
PDZD4-202ENST00000393758 FAM19A4Q96LR4 140 aa11.8□□□□□ -0.52
PDZD4-202ENST00000393758 SPANXA1Q9NS26 97 aa11.8□□□□□ -0.52
PDZD4-202ENST00000393758 CELSR1Q9NYQ6 3014 aa11.8□□□□□ -0.52
PDZD4-202ENST00000393758 PFN2P35080 140 aa11.79□□□□□ -0.52
PDZD4-202ENST00000393758 TRBV30A0A0K0K1B3 111 aa11.79□□□□□ -0.52
PDZD4-202ENST00000393758 ACANP16112 2415 aa11.78□□□□□ -0.52
PDZD4-202ENST00000393758 PSMB8P28062 276 aa11.78□□□□□ -0.52
PDZD4-202ENST00000393758 Q6ZSN1 163 aa11.78□□□□□ -0.52
PDZD4-202ENST00000393758 FAM236AA0A1B0GUQ0 79 aa11.78□□□□□ -0.52
PDZD4-202ENST00000393758 FAM236BA0A1B0GV22 79 aa11.78□□□□□ -0.52
PDZD4-202ENST00000393758 RPL35AP18077 110 aaKnown RBP11.78□□□□□ -0.52
PDZD4-202ENST00000393758 AMELXQ99217 191 aa11.78□□□□□ -0.52
PDZD4-202ENST00000393758 Q9HAA7 133 aa11.78□□□□□ -0.52
PDZD4-202ENST00000393758 CRPP02741 224 aa11.77□□□□□ -0.52
PDZD4-202ENST00000393758 BAALC-AS2P0C853 105 aa11.77□□□□□ -0.52
PDZD4-202ENST00000393758 LINC01356Q8N9X3 169 aa11.77□□□□□ -0.53
PDZD4-202ENST00000393758 COPS9Q8WXC6 57 aa11.77□□□□□ -0.53
PDZD4-202ENST00000393758 PAX4O43316 350 aa11.77□□□□□ -0.53
PDZD4-202ENST00000393758 DOPEY1Q5JWR5 2465 aa11.76□□□□□ -0.53
PDZD4-202ENST00000393758 H3BT86 120 aa11.76□□□□□ -0.53
PDZD4-202ENST00000393758 PIK3CD-AS1Q5SR53 167 aa11.76□□□□□ -0.53
PDZD4-202ENST00000393758 TRGV4A0A0C4DH28 118 aa11.75□□□□□ -0.53
PDZD4-202ENST00000393758 TINCRA0A1B0GVN0 87 aa11.75□□□□□ -0.53
PDZD4-202ENST00000393758 MRPS36P82909 103 aaKnown RBP11.75□□□□□ -0.53
PDZD4-202ENST00000393758 RBMY1A1P0DJD3 496 aaKnown RBP11.75□□□□□ -0.53
PDZD4-202ENST00000393758 RBMY1CP0DJD4 496 aa11.75□□□□□ -0.53
PDZD4-202ENST00000393758 HERVK_113P63121 156 aa11.75□□□□□ -0.53
PDZD4-202ENST00000393758 RBMY1FQ15415 496 aaKnown RBP11.75□□□□□ -0.53
PDZD4-202ENST00000393758 ZNF462Q96JM2 2506 aa11.74□□□□□ -0.53
PDZD4-202ENST00000393758 UBE2D4Q9Y2X8 147 aa11.74□□□□□ -0.53
PDZD4-202ENST00000393758 EIF4EBP3O60516 100 aaPredicted RBP11.74□□□□□ -0.53
PDZD4-202ENST00000393758 VPREB3Q9UKI3 123 aa11.74□□□□□ -0.53
PDZD4-202ENST00000393758 C9orf153Q5TBE3 101 aa11.74□□□□□ -0.53
PDZD4-202ENST00000393758 NOP10Q9NPE3 64 aaKnown RBP11.74□□□□□ -0.53
PDZD4-202ENST00000393758 LINC00308Q8TCZ7 52 aa11.73□□□□□ -0.53
PDZD4-202ENST00000393758 ODF3Q96PU9 254 aa11.72□□□□□ -0.53
PDZD4-202ENST00000393758 EDA2RQ9HAV5 297 aa11.72□□□□□ -0.53
PDZD4-202ENST00000393758 COX6A2Q02221 97 aa11.72□□□□□ -0.53
PDZD4-202ENST00000393758 PYGO1Q9Y3Y4 419 aa11.72□□□□□ -0.53
PDZD4-202ENST00000393758 LST1O00453 97 aa11.71□□□□□ -0.53
PDZD4-202ENST00000393758 C5orf38Q86SI9 138 aa11.71□□□□□ -0.54
PDZD4-202ENST00000393758 SBSPONQ8IVN8 264 aa11.71□□□□□ -0.54
PDZD4-202ENST00000393758 DAZ2Q13117 558 aaKnown RBP11.7□□□□□ -0.54
PDZD4-202ENST00000393758 DAZ4Q86SG3 579 aaKnown RBP11.7□□□□□ -0.54
PDZD4-202ENST00000393758 DAZ3Q9NR90 486 aaKnown RBP11.7□□□□□ -0.54
PDZD4-202ENST00000393758 Q6ZTI0 123 aa11.7□□□□□ -0.54
PDZD4-202ENST00000393758 CHCHD7Q9BUK0 85 aa11.7□□□□□ -0.54
PDZD4-202ENST00000393758 MAP6D1Q9H9H5 199 aa11.7□□□□□ -0.54
PDZD4-202ENST00000393758 DEFB130BP0DP73 79 aa11.69□□□□□ -0.54
PDZD4-202ENST00000393758 DEFB130AP0DP74 79 aa11.69□□□□□ -0.54
PDZD4-202ENST00000393758 CLPSL2Q6UWE3 100 aa11.69□□□□□ -0.54
PDZD4-202ENST00000393758 FLNCQ14315 2725 aa11.69□□□□□ -0.54
PDZD4-202ENST00000393758 SPANXDQ9BXN6 97 aa11.69□□□□□ -0.54
PDZD4-202ENST00000393758 SPANXCQ9NY87 97 aa11.69□□□□□ -0.54
PDZD4-202ENST00000393758 ITPR1Q14643 2758 aa11.69□□□□□ -0.54
PDZD4-202ENST00000393758 HERV-K104P63124 156 aa11.69□□□□□ -0.54
PDZD4-202ENST00000393758 LINC00694P0DN24 101 aa11.68□□□□□ -0.54
PDZD4-202ENST00000393758 TMEM243Q9BU79 118 aa11.68□□□□□ -0.54
PDZD4-202ENST00000393758 ATP5G1P05496 136 aa11.68□□□□□ -0.54
PDZD4-202ENST00000393758 KLK9Q2XQG4 91 aa11.68□□□□□ -0.54
PDZD4-202ENST00000393758 C6orf226Q5I0X4 101 aa11.68□□□□□ -0.54
PDZD4-202ENST00000393758 MIR7-3HGQ8N6C7 128 aa11.68□□□□□ -0.54
PDZD4-202ENST00000393758 CUBNO60494 3623 aa11.68□□□□□ -0.54
PDZD4-202ENST00000393758 CITED1Q99966 193 aa11.67□□□□□ -0.54
PDZD4-202ENST00000393758 A0A096LPF7 62 aa11.67□□□□□ -0.54
PDZD4-202ENST00000393758 IGKV3D-7A0A0C4DH55 119 aa11.67□□□□□ -0.54
PDZD4-202ENST00000393758 ZANQ9Y493 2812 aa11.67□□□□□ -0.54
PDZD4-202ENST00000393758 HIST1H4AP62805 103 aaKnown RBP11.67□□□□□ -0.54
PDZD4-202ENST00000393758 SND1-IT1Q9HBX3 110 aa11.67□□□□□ -0.54
PDZD4-202ENST00000393758 COX7A2LO14548 114 aa11.66□□□□□ -0.54
PDZD4-202ENST00000393758 RBMY1BA6NDE4 496 aaKnown RBP11.66□□□□□ -0.54
PDZD4-202ENST00000393758 RBMY1EA6NEQ0 496 aaKnown RBP11.66□□□□□ -0.54
PDZD4-202ENST00000393758 NDUFA1O15239 70 aa11.66□□□□□ -0.54
PDZD4-202ENST00000393758 RBMY1DP0C7P1 496 aaKnown RBP11.66□□□□□ -0.54
PDZD4-202ENST00000393758 LINC00242Q5T6M2 205 aa11.65□□□□□ -0.55
PDZD4-202ENST00000393758 DNAJC30Q96LL9 226 aa11.65□□□□□ -0.55
PDZD4-202ENST00000393758 Q8N2B8 174 aa11.64□□□□□ -0.55
PDZD4-202ENST00000393758 LITAFQ99732 161 aa11.64□□□□□ -0.55
PDZD4-202ENST00000393758 K7EQD1 137 aa11.64□□□□□ -0.55
PDZD4-202ENST00000393758 DSCR9P59020 149 aa11.63□□□□□ -0.55
PDZD4-202ENST00000393758 NHLRC4P0CG21 123 aaPredicted RBP11.63□□□□□ -0.55
PDZD4-202ENST00000393758 INAFM2P0DMQ5 153 aa11.63□□□□□ -0.55
PDZD4-202ENST00000393758 C14orf132Q9NPU4 83 aa11.63□□□□□ -0.55
PDZD4-202ENST00000393758 TMEM89A2RUT3 159 aa11.62□□□□□ -0.55
PDZD4-202ENST00000393758 CHD6Q8TD26 2715 aa11.62□□□□□ -0.55
PDZD4-202ENST00000393758 LOC100131303A0A0U1RQF7 123 aa11.62□□□□□ -0.55
PDZD4-202ENST00000393758 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.62□□□□□ -0.55
PDZD4-202ENST00000393758 XCL1P47992 114 aa11.62□□□□□ -0.55
PDZD4-202ENST00000393758 TRAV13-2A0A0B4J235 113 aa11.61□□□□□ -0.55
PDZD4-202ENST00000393758 SLPIP03973 132 aa11.61□□□□□ -0.55
PDZD4-202ENST00000393758 PRB1P04280 392 aa11.61□□□□□ -0.55
PDZD4-202ENST00000393758 CRYBG3Q68DQ2 2970 aa11.61□□□□□ -0.55
PDZD4-202ENST00000393758 LECT2O14960 151 aa11.61□□□□□ -0.55
PDZD4-202ENST00000393758 TIRAPP58753 221 aa11.61□□□□□ -0.55
PDZD4-202ENST00000393758 ZNF702PQ9H963 129 aa11.61□□□□□ -0.55
PDZD4-202ENST00000393758 MRPL23Q16540 153 aaKnown RBP11.6□□□□□ -0.55
PDZD4-202ENST00000393758 SDIM1Q6ZPB5 146 aa11.59□□□□□ -0.55
PDZD4-202ENST00000393758 COX7B2Q8TF08 81 aa11.59□□□□□ -0.55
PDZD4-202ENST00000393758 CITED2Q99967 270 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms