RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 CFAP161Q6P656 301 aa11.53□□□□□ -0.56
PDLIM7-205ENST00000393551 PRSS3P2Q8NHM4 247 aa11.53□□□□□ -0.56
PDLIM7-205ENST00000393551 PLAC8Q9NZF1 115 aa11.53□□□□□ -0.56
PDLIM7-205ENST00000393551 GVQW2A0A096LPI5 108 aaPredicted RBP11.52□□□□□ -0.57
PDLIM7-205ENST00000393551 HIGD1CA8MV81 97 aa11.52□□□□□ -0.57
PDLIM7-205ENST00000393551 PMCHP20382 165 aa11.52□□□□□ -0.57
PDLIM7-205ENST00000393551 POLR2KP53803 58 aaKnown RBP11.52□□□□□ -0.57
PDLIM7-205ENST00000393551 SVBPQ8N300 66 aa11.52□□□□□ -0.57
PDLIM7-205ENST00000393551 TSKUQ8WUA8 353 aa11.52□□□□□ -0.57
PDLIM7-205ENST00000393551 DPH3Q96FX2 82 aa11.52□□□□□ -0.57
PDLIM7-205ENST00000393551 SMIM7Q9BQ49 75 aa11.52□□□□□ -0.57
PDLIM7-205ENST00000393551 PNRC1Q12796 327 aaPredicted RBP11.51□□□□□ -0.57
PDLIM7-205ENST00000393551 OR5A1Q8NGJ0 315 aa11.51□□□□□ -0.57
PDLIM7-205ENST00000393551 TMEM191AQ9H0A3 160 aa11.51□□□□□ -0.57
PDLIM7-205ENST00000393551 TMEM242Q9NWH2 141 aa11.51□□□□□ -0.57
PDLIM7-205ENST00000393551 A0A1B0GUT8 65 aa11.5□□□□□ -0.57
PDLIM7-205ENST00000393551 ZNF727A8MUV8 499 aa11.5□□□□□ -0.57
PDLIM7-205ENST00000393551 ZNF25P17030 456 aaPredicted RBP11.5□□□□□ -0.57
PDLIM7-205ENST00000393551 RAB4AP20338 218 aa11.5□□□□□ -0.57
PDLIM7-205ENST00000393551 TMEM241Q24JQ0 296 aa11.5□□□□□ -0.57
PDLIM7-205ENST00000393551 ST20Q9HBF5 79 aa11.5□□□□□ -0.57
PDLIM7-205ENST00000393551 LINC00959A0A1B0GUT2 108 aa11.49□□□□□ -0.57
PDLIM7-205ENST00000393551 SNAPINO95295 136 aa11.49□□□□□ -0.57
PDLIM7-205ENST00000393551 ADCYAP1P18509 176 aa11.49□□□□□ -0.57
PDLIM7-205ENST00000393551 XCL1P47992 114 aa11.49□□□□□ -0.57
PDLIM7-205ENST00000393551 Q6ZRU5 148 aa11.49□□□□□ -0.57
PDLIM7-205ENST00000393551 AMN1Q8IY45 258 aa11.49□□□□□ -0.57
PDLIM7-205ENST00000393551 OSTCQ9NRP0 149 aa11.49□□□□□ -0.57
PDLIM7-205ENST00000393551 NAT8Q9UHE5 227 aa11.49□□□□□ -0.57
PDLIM7-205ENST00000393551 TRBV27A0A0K0K1C4 114 aa11.48□□□□□ -0.57
PDLIM7-205ENST00000393551 PHOX2AO14813 284 aa11.48□□□□□ -0.57
PDLIM7-205ENST00000393551 APOC3P02656 99 aa11.48□□□□□ -0.57
PDLIM7-205ENST00000393551 LINC00526Q96FQ7 95 aa11.48□□□□□ -0.57
PDLIM7-205ENST00000393551 CDC42SE2Q9NRR3 84 aa11.48□□□□□ -0.57
PDLIM7-205ENST00000393551 V9GYV3 84 aa11.48□□□□□ -0.57
PDLIM7-205ENST00000393551 IGKV2-24A0A0C4DH68 120 aa11.47□□□□□ -0.57
PDLIM7-205ENST00000393551 CCL25O15444 150 aa11.47□□□□□ -0.57
PDLIM7-205ENST00000393551 MRPL52Q86TS9 123 aaKnown RBP11.47□□□□□ -0.57
PDLIM7-205ENST00000393551 BORCS7Q96B45 105 aa11.47□□□□□ -0.57
PDLIM7-205ENST00000393551 A0A096LNI7 61 aa11.46□□□□□ -0.57
PDLIM7-205ENST00000393551 SMKR1H3BMG3 65 aa11.46□□□□□ -0.57
PDLIM7-205ENST00000393551 MAJINQ3KP22 176 aa11.46□□□□□ -0.57
PDLIM7-205ENST00000393551 NUP35Q8NFH5 326 aa11.46□□□□□ -0.57
PDLIM7-205ENST00000393551 MRAP2Q96G30 205 aa11.46□□□□□ -0.57
PDLIM7-205ENST00000393551 BTF3L4Q96K17 158 aa11.46□□□□□ -0.57
PDLIM7-205ENST00000393551 RHEBQ15382 184 aa11.45□□□□□ -0.58
PDLIM7-205ENST00000393551 NRACQ8N912 160 aa11.45□□□□□ -0.58
PDLIM7-205ENST00000393551 TMEM101Q96IK0 257 aa11.45□□□□□ -0.58
PDLIM7-205ENST00000393551 PLA2G2DQ9UNK4 145 aa11.45□□□□□ -0.58
PDLIM7-205ENST00000393551 ZNF664Q8N3J9 261 aa11.44□□□□□ -0.58
PDLIM7-205ENST00000393551 ISOC2Q96AB3 205 aa11.44□□□□□ -0.58
PDLIM7-205ENST00000393551 C7orf77A4D0Y5 90 aa11.43□□□□□ -0.58
PDLIM7-205ENST00000393551 STPG4Q8N801 248 aa11.43□□□□□ -0.58
PDLIM7-205ENST00000393551 IGHV1-58A0A0C4DH39 117 aa11.42□□□□□ -0.58
PDLIM7-205ENST00000393551 RPL23P62829 140 aaKnown RBP11.42□□□□□ -0.58
PDLIM7-205ENST00000393551 CD164L2Q6UWJ8 174 aa11.42□□□□□ -0.58
PDLIM7-205ENST00000393551 VCYO14598 125 aa11.41□□□□□ -0.58
PDLIM7-205ENST00000393551 SS18Q15532 418 aa11.41□□□□□ -0.58
PDLIM7-205ENST00000393551 C7orf33Q8WU49 177 aa11.41□□□□□ -0.58
PDLIM7-205ENST00000393551 PPP1R2P9O14990 202 aa11.4□□□□□ -0.58
PDLIM7-205ENST00000393551 MT-ND4LP03901 98 aa11.4□□□□□ -0.58
PDLIM7-205ENST00000393551 SUMO2P61956 95 aaKnown RBP11.4□□□□□ -0.58
PDLIM7-205ENST00000393551 PRR3P79522 188 aaKnown RBP11.4□□□□□ -0.58
PDLIM7-205ENST00000393551 RIGQ13278 110 aa11.4□□□□□ -0.58
PDLIM7-205ENST00000393551 ANAPC16Q96DE5 110 aa11.4□□□□□ -0.58
PDLIM7-205ENST00000393551 CTDSP1Q9GZU7 261 aa11.4□□□□□ -0.58
PDLIM7-205ENST00000393551 UBE2D4Q9Y2X8 147 aa11.4□□□□□ -0.58
PDLIM7-205ENST00000393551 ADIRFQ15847 76 aa11.39□□□□□ -0.59
PDLIM7-205ENST00000393551 MRPL51Q4U2R6 128 aaKnown RBP11.39□□□□□ -0.59
PDLIM7-205ENST00000393551 RNASE13Q5GAN3 156 aaKnown RBP11.39□□□□□ -0.59
PDLIM7-205ENST00000393551 CARD19Q96LW7 228 aa11.39□□□□□ -0.59
PDLIM7-205ENST00000393551 NAT8BQ9UHF3 227 aa11.39□□□□□ -0.59
PDLIM7-205ENST00000393551 FAM104BQ5XKR9 115 aa11.38□□□□□ -0.59
PDLIM7-205ENST00000393551 CSDC2Q9Y534 153 aaKnown RBP11.38□□□□□ -0.59
PDLIM7-205ENST00000393551 SMIM27A0A1W2PRY6 76 aa11.37□□□□□ -0.59
PDLIM7-205ENST00000393551 FCER1GP30273 86 aa11.37□□□□□ -0.59
PDLIM7-205ENST00000393551 SYCNQ0VAF6 134 aa11.37□□□□□ -0.59
PDLIM7-205ENST00000393551 FAM104AQ969W3 186 aa11.37□□□□□ -0.59
PDLIM7-205ENST00000393551 ZNF561-AS1K7EIQ3 104 aa11.36□□□□□ -0.59
PDLIM7-205ENST00000393551 RPS10P5Q9NQ39 176 aa11.36□□□□□ -0.59
PDLIM7-205ENST00000393551 LRP2P98164 4655 aa11.35□□□□□ -0.59
PDLIM7-205ENST00000393551 IGLV4-69A0A075B6H9 119 aa11.35□□□□□ -0.59
PDLIM7-205ENST00000393551 C1orf196B1AJZ1 125 aa11.35□□□□□ -0.59
PDLIM7-205ENST00000393551 PPP1R17O96001 155 aa11.35□□□□□ -0.59
PDLIM7-205ENST00000393551 CAMPP49913 170 aa11.35□□□□□ -0.59
PDLIM7-205ENST00000393551 Q6ZUT4 128 aa11.35□□□□□ -0.59
PDLIM7-205ENST00000393551 LINC00474Q9P2X8 69 aa11.35□□□□□ -0.59
PDLIM7-205ENST00000393551 TRBV24-1A0A075B6N3 115 aa11.34□□□□□ -0.59
PDLIM7-205ENST00000393551 ODF1Q14990 250 aa11.34□□□□□ -0.59
PDLIM7-205ENST00000393551 KIR2DL4Q99706 377 aa11.34□□□□□ -0.59
PDLIM7-205ENST00000393551 SMCO4Q9NRQ5 59 aa11.34□□□□□ -0.59
PDLIM7-205ENST00000393551 TRAV13-1A0A0B4J241 112 aa11.33□□□□□ -0.6
PDLIM7-205ENST00000393551 COX7A2LO14548 114 aa11.33□□□□□ -0.6
PDLIM7-205ENST00000393551 PTTG1IPP53801 180 aa11.33□□□□□ -0.6
PDLIM7-205ENST00000393551 LINC01600Q96MT4 127 aa11.33□□□□□ -0.6
PDLIM7-205ENST00000393551 IMMP2LQ96T52 175 aa11.33□□□□□ -0.6
PDLIM7-205ENST00000393551 RPL39P62891 51 aaKnown RBP11.32□□□□□ -0.6
PDLIM7-205ENST00000393551 C20orf78Q9BR46 151 aa11.32□□□□□ -0.6
PDLIM7-205ENST00000393551 TIMM21Q9BVV7 248 aa11.32□□□□□ -0.6
PDLIM7-205ENST00000393551 MALP21145 153 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms