RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 NDUFA7O95182 113 aa12.09□□□□□ -0.47
SNX9-201ENST00000392185 BRI3O95415 125 aa12.09□□□□□ -0.47
SNX9-201ENST00000392185 C9orf85Q96MD7 179 aa12.09□□□□□ -0.47
SNX9-201ENST00000392185 LAMTOR3Q9UHA4 124 aa12.09□□□□□ -0.47
SNX9-201ENST00000392185 TSPAN13O95857 204 aa12.09□□□□□ -0.47
SNX9-201ENST00000392185 CDKN2A-AS1Q9UH64 79 aa12.08□□□□□ -0.47
SNX9-201ENST00000392185 IGLV1-51P01701 117 aa12.08□□□□□ -0.48
SNX9-201ENST00000392185 C11orf45Q8TAV5 145 aa12.08□□□□□ -0.48
SNX9-201ENST00000392185 IGKV2D-26A0A0A0MRZ7 120 aa12.08□□□□□ -0.48
SNX9-201ENST00000392185 K7EP13 123 aa12.08□□□□□ -0.48
SNX9-201ENST00000392185 CNFNQ9BYD5 112 aa12.08□□□□□ -0.48
SNX9-201ENST00000392185 IGLV4-3A0A075B6K6 122 aa12.08□□□□□ -0.48
SNX9-201ENST00000392185 TTC32Q5I0X7 151 aa12.08□□□□□ -0.48
SNX9-201ENST00000392185 PCP4P48539 62 aa12.07□□□□□ -0.48
SNX9-201ENST00000392185 TRBV27A0A0K0K1C4 114 aa12.07□□□□□ -0.48
SNX9-201ENST00000392185 SMIM9A6NGZ8 99 aa12.07□□□□□ -0.48
SNX9-201ENST00000392185 URB1-AS1Q96HZ7 61 aa12.07□□□□□ -0.48
SNX9-201ENST00000392185 ZNF580Q9UK33 172 aa12.07□□□□□ -0.48
SNX9-201ENST00000392185 IGHV4-28A0A0C4DH34 117 aa12.06□□□□□ -0.48
SNX9-201ENST00000392185 ZZEF1O43149 2961 aa12.06□□□□□ -0.48
SNX9-201ENST00000392185 CFC1BP0CG36 223 aa12.06□□□□□ -0.48
SNX9-201ENST00000392185 CFC1P0CG37 223 aa12.06□□□□□ -0.48
SNX9-201ENST00000392185 SH2D6Q7Z4S9 175 aa12.06□□□□□ -0.48
SNX9-201ENST00000392185 CAMK2N2Q96S95 79 aa12.06□□□□□ -0.48
SNX9-201ENST00000392185 RS1O15537 224 aa12.05□□□□□ -0.48
SNX9-201ENST00000392185 POLR2KP53803 58 aaKnown RBP12.05□□□□□ -0.48
SNX9-201ENST00000392185 COX7B2Q8TF08 81 aa12.05□□□□□ -0.48
SNX9-201ENST00000392185 COL12A1Q99715 3063 aa12.05□□□□□ -0.48
SNX9-201ENST00000392185 IGHV4-4A0A075B6R2 117 aa12.05□□□□□ -0.48
SNX9-201ENST00000392185 LINC00269Q8N2A0 174 aa12.05□□□□□ -0.48
SNX9-201ENST00000392185 LYRM9A8MSI8 78 aa12.04□□□□□ -0.48
SNX9-201ENST00000392185 NKAPP1Q8N9T2 125 aa12.04□□□□□ -0.48
SNX9-201ENST00000392185 IGHV1-58A0A0C4DH39 117 aa12.04□□□□□ -0.48
SNX9-201ENST00000392185 GAGE2EQ4V326 116 aa12.04□□□□□ -0.48
SNX9-201ENST00000392185 GAGE2DQ9UEU5 116 aa12.04□□□□□ -0.48
SNX9-201ENST00000392185 DMXL1Q9Y485 3027 aa12.04□□□□□ -0.48
SNX9-201ENST00000392185 K7EP34 96 aa12.04□□□□□ -0.48
SNX9-201ENST00000392185 SETXQ7Z333 2677 aaKnown RBP12.03□□□□□ -0.48
SNX9-201ENST00000392185 IGHV4-30-4P0DP06 118 aa12.03□□□□□ -0.48
SNX9-201ENST00000392185 C1orf158Q8N1D5 194 aa12.03□□□□□ -0.48
SNX9-201ENST00000392185 TRBV20-1A0A075B6N2 111 aa12.03□□□□□ -0.48
SNX9-201ENST00000392185 RMI2Q96E14 147 aa12.03□□□□□ -0.48
SNX9-201ENST00000392185 SND1-IT1Q9HBX3 110 aa12.03□□□□□ -0.48
SNX9-201ENST00000392185 DEFB131BA0A096LNP1 70 aa12.03□□□□□ -0.48
SNX9-201ENST00000392185 TRAV8-4A0A0B4J246 113 aa12.03□□□□□ -0.48
SNX9-201ENST00000392185 TRBV6-5A0A0K0K1A5 114 aa12.02□□□□□ -0.48
SNX9-201ENST00000392185 TSHBP01222 138 aa12.02□□□□□ -0.48
SNX9-201ENST00000392185 PRSS47A8MTI9 375 aa12.02□□□□□ -0.49
SNX9-201ENST00000392185 MIFP14174 115 aa12.02□□□□□ -0.49
SNX9-201ENST00000392185 HERV-K104P63124 156 aa12.02□□□□□ -0.49
SNX9-201ENST00000392185 LURAP1LQ8IV03 231 aa12.02□□□□□ -0.49
SNX9-201ENST00000392185 ZNF22P17026 224 aaPredicted RBP12.01□□□□□ -0.49
SNX9-201ENST00000392185 SPAG11BQ08648 103 aa12.01□□□□□ -0.49
SNX9-201ENST00000392185 MAPKAPK5-AS1Q8N8E1 139 aa12.01□□□□□ -0.49
SNX9-201ENST00000392185 TRBV6-4A0A1B0GX49 114 aa12.01□□□□□ -0.49
SNX9-201ENST00000392185 GHRHP01286 108 aa12.01□□□□□ -0.49
SNX9-201ENST00000392185 A8MZ25 164 aa12.01□□□□□ -0.49
SNX9-201ENST00000392185 GTSF1LQ9H1H1 148 aa12□□□□□ -0.49
SNX9-201ENST00000392185 HIGD1BQ9P298 99 aa12□□□□□ -0.49
SNX9-201ENST00000392185 TRBV6-8A0A0A6YYG3 113 aa12□□□□□ -0.49
SNX9-201ENST00000392185 UNC79Q9P2D8 2635 aa12□□□□□ -0.49
SNX9-201ENST00000392185 TEX15Q9BXT5 2789 aa12□□□□□ -0.49
SNX9-201ENST00000392185 TRAV13-2A0A0B4J235 113 aa12□□□□□ -0.49
SNX9-201ENST00000392185 MIR7-3HGQ8N6C7 128 aa12□□□□□ -0.49
SNX9-201ENST00000392185 C16orf95Q9H693 158 aa12□□□□□ -0.49
SNX9-201ENST00000392185 COX8CQ7Z4L0 72 aa11.99□□□□□ -0.49
SNX9-201ENST00000392185 C10orf126Q8N4M7 172 aa11.99□□□□□ -0.49
SNX9-201ENST00000392185 TAX1BP3O14907 124 aa11.99□□□□□ -0.49
SNX9-201ENST00000392185 STAB1Q9NY15 2570 aa11.98□□□□□ -0.49
SNX9-201ENST00000392185 OCIAD2Q56VL3 154 aa11.98□□□□□ -0.49
SNX9-201ENST00000392185 REG3AQ06141 175 aa11.97□□□□□ -0.49
SNX9-201ENST00000392185 RETNQ9HD89 108 aa11.97□□□□□ -0.49
SNX9-201ENST00000392185 GAGE12HA6NDE8 117 aa11.97□□□□□ -0.49
SNX9-201ENST00000392185 IFITM1P13164 125 aa11.97□□□□□ -0.49
SNX9-201ENST00000392185 HIGD2BQ4VC39 106 aa11.97□□□□□ -0.49
SNX9-201ENST00000392185 GCN1Q92616 2671 aaKnown RBP11.97□□□□□ -0.49
SNX9-201ENST00000392185 RBX1P62877 108 aa11.96□□□□□ -0.49
SNX9-201ENST00000392185 RPL18AQ02543 176 aaKnown RBP11.96□□□□□ -0.49
SNX9-201ENST00000392185 GAGE2AQ6NT46 116 aa11.96□□□□□ -0.49
SNX9-201ENST00000392185 CARD19Q96LW7 228 aa11.96□□□□□ -0.5
SNX9-201ENST00000392185 TACC2O95359 2948 aa11.96□□□□□ -0.5
SNX9-201ENST00000392185 TINCRA0A1B0GVN0 87 aa11.96□□□□□ -0.5
SNX9-201ENST00000392185 Q8N2B8 174 aa11.96□□□□□ -0.5
SNX9-201ENST00000392185 NFE4Q86UQ8 179 aa11.95□□□□□ -0.5
SNX9-201ENST00000392185 SIGMAR1Q99720 223 aa11.95□□□□□ -0.5
SNX9-201ENST00000392185 A0A0J9YXY3 114 aa11.95□□□□□ -0.5
SNX9-201ENST00000392185 KIR2DL5BQ8NHK3 375 aa11.95□□□□□ -0.5
SNX9-201ENST00000392185 NTN5Q8WTR8 489 aaPredicted RBP11.94□□□□□ -0.5
SNX9-201ENST00000392185 MYO15AQ9UKN7 3530 aa11.94□□□□□ -0.5
SNX9-201ENST00000392185 CHCHD10Q8WYQ3 142 aaPredicted RBP11.93□□□□□ -0.5
SNX9-201ENST00000392185 SPATA25Q9BR10 227 aa11.93□□□□□ -0.5
SNX9-201ENST00000392185 CFAP47Q6ZTR5 3102 aa11.93□□□□□ -0.5
SNX9-201ENST00000392185 OVOL2Q9BRP0 275 aa11.93□□□□□ -0.5
SNX9-201ENST00000392185 LINC00526Q96FQ7 95 aa11.93□□□□□ -0.5
SNX9-201ENST00000392185 NDUFA1O15239 70 aa11.93□□□□□ -0.5
SNX9-201ENST00000392185 F8W1H4 67 aa11.92□□□□□ -0.5
SNX9-201ENST00000392185 FSHBP01225 129 aa11.92□□□□□ -0.5
SNX9-201ENST00000392185 KPRPQ5T749 579 aaPredicted RBP11.92□□□□□ -0.5
SNX9-201ENST00000392185 COL6A5A8TX70 2615 aa11.91□□□□□ -0.5
SNX9-201ENST00000392185 A0A096LNJ9 63 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms