RNA–Protein interactions for RNA: ENST00000390243.2

IGKV4-1-201, Transcript of immunoglobulin kappa variable 4-1, humanhuman

APPRIS P1 BASIC

Gene IGKV4-1, Length 538 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV4-1-201ENST00000390243 VCYO14598 125 aa11.05□□□□□ -0.64
IGKV4-1-201ENST00000390243 ZNF25P17030 456 aaPredicted RBP11.05□□□□□ -0.64
IGKV4-1-201ENST00000390243 UQCC3Q6UW78 93 aa11.05□□□□□ -0.64
IGKV4-1-201ENST00000390243 ANAPC16Q96DE5 110 aa11.05□□□□□ -0.64
IGKV4-1-201ENST00000390243 LINC00862A6NCI5 91 aa11.04□□□□□ -0.64
IGKV4-1-201ENST00000390243 EPM2AB3EWF7 344 aa11.04□□□□□ -0.64
IGKV4-1-201ENST00000390243 F8W036 122 aa11.04□□□□□ -0.64
IGKV4-1-201ENST00000390243 TCAPO15273 167 aa11.04□□□□□ -0.64
IGKV4-1-201ENST00000390243 MT-ND4LP03901 98 aa11.04□□□□□ -0.64
IGKV4-1-201ENST00000390243 FCER1GP30273 86 aa11.04□□□□□ -0.64
IGKV4-1-201ENST00000390243 HIGD2BQ4VC39 106 aa11.04□□□□□ -0.64
IGKV4-1-201ENST00000390243 C14orf177Q52M58 125 aa11.04□□□□□ -0.64
IGKV4-1-201ENST00000390243 OR5A1Q8NGJ0 315 aa11.04□□□□□ -0.64
IGKV4-1-201ENST00000390243 CDC42SE2Q9NRR3 84 aa11.04□□□□□ -0.64
IGKV4-1-201ENST00000390243 SRRM2Q9UQ35 2752 aaKnown RBP11.03□□□□□ -0.64
IGKV4-1-201ENST00000390243 LINC00959A0A1B0GUT2 108 aa11.03□□□□□ -0.64
IGKV4-1-201ENST00000390243 XCL1P47992 114 aa11.03□□□□□ -0.64
IGKV4-1-201ENST00000390243 RPL32P62910 135 aaKnown RBP11.03□□□□□ -0.64
IGKV4-1-201ENST00000390243 C20orf78Q9BR46 151 aa11.03□□□□□ -0.64
IGKV4-1-201ENST00000390243 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.03□□□□□ -0.64
IGKV4-1-201ENST00000390243 MYCBP2O75592 4640 aa11.03□□□□□ -0.64
IGKV4-1-201ENST00000390243 hDV102S1A0JD36 115 aa11.02□□□□□ -0.65
IGKV4-1-201ENST00000390243 CCL25O15444 150 aa11.02□□□□□ -0.65
IGKV4-1-201ENST00000390243 S100A8P05109 93 aa11.02□□□□□ -0.65
IGKV4-1-201ENST00000390243 CIRBP-AS1Q8TBR5 109 aa11.02□□□□□ -0.65
IGKV4-1-201ENST00000390243 OPRPNQ99935 248 aaPredicted RBP11.02□□□□□ -0.65
IGKV4-1-201ENST00000390243 FLG2Q5D862 2391 aaPredicted RBP11.01□□□□□ -0.65
IGKV4-1-201ENST00000390243 PPP1R17O96001 155 aa11.01□□□□□ -0.65
IGKV4-1-201ENST00000390243 ORMDL3Q8N138 153 aa11.01□□□□□ -0.65
IGKV4-1-201ENST00000390243 C9orf163Q8N9P6 203 aa11.01□□□□□ -0.65
IGKV4-1-201ENST00000390243 LINC00526Q96FQ7 95 aa11.01□□□□□ -0.65
IGKV4-1-201ENST00000390243 BTF3L4Q96K17 158 aa11.01□□□□□ -0.65
IGKV4-1-201ENST00000390243 PRELID3AQ96N28 172 aa11.01□□□□□ -0.65
IGKV4-1-201ENST00000390243 CNBPP62633 177 aaKnown RBP11□□□□□ -0.65
IGKV4-1-201ENST00000390243 TMEM136Q6ZRR5 245 aa11□□□□□ -0.65
IGKV4-1-201ENST00000390243 ZNF664Q8N3J9 261 aa11□□□□□ -0.65
IGKV4-1-201ENST00000390243 TMEM101Q96IK0 257 aa11□□□□□ -0.65
IGKV4-1-201ENST00000390243 KIR2DL4Q99706 377 aa11□□□□□ -0.65
IGKV4-1-201ENST00000390243 SEC11CQ9BY50 192 aa11□□□□□ -0.65
IGKV4-1-201ENST00000390243 CHTF8P0CG12 524 aa10.99□□□□□ -0.65
IGKV4-1-201ENST00000390243 CHAC1Q9BUX1 264 aa10.99□□□□□ -0.65
IGKV4-1-201ENST00000390243 LOC389332A0A1B0GUA5 103 aa10.98□□□□□ -0.65
IGKV4-1-201ENST00000390243 PHOX2AO14813 284 aa10.98□□□□□ -0.65
IGKV4-1-201ENST00000390243 KRTAP10-4P60372 401 aaPredicted RBP10.98□□□□□ -0.65
IGKV4-1-201ENST00000390243 C10orf91Q5T1B1 145 aa10.98□□□□□ -0.65
IGKV4-1-201ENST00000390243 SDIM1Q6ZPB5 146 aa10.98□□□□□ -0.65
IGKV4-1-201ENST00000390243 LINC00528Q8N1L1 170 aa10.98□□□□□ -0.65
IGKV4-1-201ENST00000390243 GVQW2A0A096LPI5 108 aaPredicted RBP10.97□□□□□ -0.65
IGKV4-1-201ENST00000390243 PPBPP02775 128 aa10.97□□□□□ -0.65
IGKV4-1-201ENST00000390243 DGAT2L7PQ6IED9 249 aa10.97□□□□□ -0.65
IGKV4-1-201ENST00000390243 CSDC2Q9Y534 153 aaKnown RBP10.97□□□□□ -0.65
IGKV4-1-201ENST00000390243 KIAA1644Q3SXP7 199 aa10.96□□□□□ -0.65
IGKV4-1-201ENST00000390243 CLRN3Q8NCR9 226 aa10.96□□□□□ -0.65
IGKV4-1-201ENST00000390243 CARHSP1Q9Y2V2 147 aaKnown RBP10.96□□□□□ -0.65
IGKV4-1-201ENST00000390243 TRAV13-1A0A0B4J241 112 aa10.95□□□□□ -0.66
IGKV4-1-201ENST00000390243 IMMP2LQ96T52 175 aa10.95□□□□□ -0.66
IGKV4-1-201ENST00000390243 TIMM21Q9BVV7 248 aa10.95□□□□□ -0.66
IGKV4-1-201ENST00000390243 PRSS47A8MTI9 375 aa10.93□□□□□ -0.66
IGKV4-1-201ENST00000390243 ZC2HC1BQ5TFG8 222 aa10.93□□□□□ -0.66
IGKV4-1-201ENST00000390243 CD164L2Q6UWJ8 174 aa10.93□□□□□ -0.66
IGKV4-1-201ENST00000390243 CTDSP1Q9GZU7 261 aa10.93□□□□□ -0.66
IGKV4-1-201ENST00000390243 INAFM2P0DMQ5 153 aa10.92□□□□□ -0.66
IGKV4-1-201ENST00000390243 SS18Q15532 418 aa10.92□□□□□ -0.66
IGKV4-1-201ENST00000390243 MAP1LC3AQ9H492 121 aa10.92□□□□□ -0.66
IGKV4-1-201ENST00000390243 IGLV4-3A0A075B6K6 122 aa10.91□□□□□ -0.66
IGKV4-1-201ENST00000390243 CIRBPQ14011 172 aaKnown RBP10.91□□□□□ -0.66
IGKV4-1-201ENST00000390243 PRSS3P2Q8NHM4 247 aa10.91□□□□□ -0.66
IGKV4-1-201ENST00000390243 SPANXA1Q9NS26 97 aa10.91□□□□□ -0.66
IGKV4-1-201ENST00000390243 AP5S1Q9NUS5 200 aa10.91□□□□□ -0.66
IGKV4-1-201ENST00000390243 PKHD1L1Q86WI1 4243 aa10.91□□□□□ -0.66
IGKV4-1-201ENST00000390243 LINC00173Q6ZV60 143 aa10.9□□□□□ -0.66
IGKV4-1-201ENST00000390243 C5orf38Q86SI9 138 aa10.9□□□□□ -0.66
IGKV4-1-201ENST00000390243 Q8N8P6 123 aa10.9□□□□□ -0.66
IGKV4-1-201ENST00000390243 LAMTOR2Q9Y2Q5 125 aa10.9□□□□□ -0.66
IGKV4-1-201ENST00000390243 IGHV3-64A0A075B6Q5 118 aa10.89□□□□□ -0.67
IGKV4-1-201ENST00000390243 IGHV1-58A0A0C4DH39 117 aa10.89□□□□□ -0.67
IGKV4-1-201ENST00000390243 FAM229AH3BQW9 127 aa10.89□□□□□ -0.67
IGKV4-1-201ENST00000390243 IFI27P40305 119 aaPredicted RBP10.89□□□□□ -0.67
IGKV4-1-201ENST00000390243 MRPS36P82909 103 aaKnown RBP10.89□□□□□ -0.67
IGKV4-1-201ENST00000390243 COX6A2Q02221 97 aa10.89□□□□□ -0.67
IGKV4-1-201ENST00000390243 SPACA4Q8TDM5 124 aa10.89□□□□□ -0.67
IGKV4-1-201ENST00000390243 RPS10P5Q9NQ39 176 aa10.89□□□□□ -0.67
IGKV4-1-201ENST00000390243 TRAV9-1A0A075B6T8 112 aa10.88□□□□□ -0.67
IGKV4-1-201ENST00000390243 CFAP161Q6P656 301 aa10.88□□□□□ -0.67
IGKV4-1-201ENST00000390243 TMEM18Q96B42 140 aa10.88□□□□□ -0.67
IGKV4-1-201ENST00000390243 LRP1Q07954 4544 aaKnown RBP10.87□□□□□ -0.67
IGKV4-1-201ENST00000390243 IGLV4-69A0A075B6H9 119 aa10.87□□□□□ -0.67
IGKV4-1-201ENST00000390243 A0A096LNI7 61 aa10.87□□□□□ -0.67
IGKV4-1-201ENST00000390243 IFITM10A6NMD0 228 aa10.87□□□□□ -0.67
IGKV4-1-201ENST00000390243 C1orf196B1AJZ1 125 aa10.87□□□□□ -0.67
IGKV4-1-201ENST00000390243 COX7A2LO14548 114 aa10.87□□□□□ -0.67
IGKV4-1-201ENST00000390243 HNRNPA3P51991 378 aaKnown RBP10.87□□□□□ -0.67
IGKV4-1-201ENST00000390243 RHEBQ15382 184 aa10.87□□□□□ -0.67
IGKV4-1-201ENST00000390243 C2orf66Q6UXQ4 117 aa10.87□□□□□ -0.67
IGKV4-1-201ENST00000390243 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.86□□□□□ -0.67
IGKV4-1-201ENST00000390243 TGIF2-C20orf24A0A0A6YYL0 155 aa10.86□□□□□ -0.67
IGKV4-1-201ENST00000390243 IGKV2-24A0A0C4DH68 120 aa10.86□□□□□ -0.67
IGKV4-1-201ENST00000390243 RAB5AP20339 215 aa10.86□□□□□ -0.67
IGKV4-1-201ENST00000390243 Q6ZRU5 148 aa10.86□□□□□ -0.67
IGKV4-1-201ENST00000390243 A0A087WYN8 130 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms