RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 Q6Q795 121 aa10.57□□□□□ -0.72
RTF1-201ENST00000389629 POM121L12Q8N7R1 296 aa10.57□□□□□ -0.72
RTF1-201ENST00000389629 NCOR2Q9Y618 2525 aa10.57□□□□□ -0.72
RTF1-201ENST00000389629 A6NDX4 124 aa10.57□□□□□ -0.72
RTF1-201ENST00000389629 PRM2P04554 102 aa10.57□□□□□ -0.72
RTF1-201ENST00000389629 C20orf197Q8N268 126 aa10.57□□□□□ -0.72
RTF1-201ENST00000389629 VPS13AQ96RL7 3174 aa10.56□□□□□ -0.72
RTF1-201ENST00000389629 C5orf47Q569G3 176 aa10.56□□□□□ -0.72
RTF1-201ENST00000389629 ABCA2Q9BZC7 2435 aa10.56□□□□□ -0.72
RTF1-201ENST00000389629 CRYGDP07320 174 aa10.56□□□□□ -0.72
RTF1-201ENST00000389629 PSMB8P28062 276 aa10.56□□□□□ -0.72
RTF1-201ENST00000389629 TRBV6-5A0A0K0K1A5 114 aa10.56□□□□□ -0.72
RTF1-201ENST00000389629 NBL1P41271 181 aa10.56□□□□□ -0.72
RTF1-201ENST00000389629 C10orf105Q8TEF2 133 aa10.56□□□□□ -0.72
RTF1-201ENST00000389629 KLK5Q9Y337 293 aaPredicted RBP10.55□□□□□ -0.72
RTF1-201ENST00000389629 NCR3O14931 201 aa10.55□□□□□ -0.72
RTF1-201ENST00000389629 SPEGQ15772 3267 aa10.55□□□□□ -0.72
RTF1-201ENST00000389629 TRAV25A0A0B4J276 109 aa10.54□□□□□ -0.72
RTF1-201ENST00000389629 TIRAPP58753 221 aa10.54□□□□□ -0.72
RTF1-201ENST00000389629 ADAMTSL4-AS1Q5T5F5 129 aa10.54□□□□□ -0.72
RTF1-201ENST00000389629 PRRC2AP48634 2157 aaKnown RBP10.54□□□□□ -0.72
RTF1-201ENST00000389629 KLLNB2CW77 178 aa10.54□□□□□ -0.72
RTF1-201ENST00000389629 K7EQD1 137 aa10.54□□□□□ -0.72
RTF1-201ENST00000389629 C10orf99Q6UWK7 81 aa10.54□□□□□ -0.72
RTF1-201ENST00000389629 VPREB3Q9UKI3 123 aa10.54□□□□□ -0.72
RTF1-201ENST00000389629 NAV2Q8IVL1 2488 aa10.54□□□□□ -0.72
RTF1-201ENST00000389629 K7EQG2 157 aa10.53□□□□□ -0.72
RTF1-201ENST00000389629 CELSR3Q9NYQ7 3312 aa10.53□□□□□ -0.72
RTF1-201ENST00000389629 EDN2P20800 178 aa10.53□□□□□ -0.72
RTF1-201ENST00000389629 NRGNQ92686 78 aa10.53□□□□□ -0.72
RTF1-201ENST00000389629 IMUPQ9GZP8 106 aa10.53□□□□□ -0.72
RTF1-201ENST00000389629 IGLV10-54A0A075B6I4 117 aa10.53□□□□□ -0.72
RTF1-201ENST00000389629 FAM110AQ9BQ89 295 aa10.52□□□□□ -0.72
RTF1-201ENST00000389629 COX7CP15954 63 aa10.52□□□□□ -0.73
RTF1-201ENST00000389629 LINC01546A6NGU7 62 aa10.52□□□□□ -0.73
RTF1-201ENST00000389629 NDUFA1O15239 70 aa10.52□□□□□ -0.73
RTF1-201ENST00000389629 ANGP03950 147 aaKnown RBP10.51□□□□□ -0.73
RTF1-201ENST00000389629 LOC107984640A0A0U1RRK4 108 aa10.51□□□□□ -0.73
RTF1-201ENST00000389629 RNF152Q8N8N0 203 aa10.51□□□□□ -0.73
RTF1-201ENST00000389629 PPDPFQ9H3Y8 114 aa10.51□□□□□ -0.73
RTF1-201ENST00000389629 FN1P02751 2386 aaKnown RBP10.51□□□□□ -0.73
RTF1-201ENST00000389629 HIVEP3Q5T1R4 2406 aa10.51□□□□□ -0.73
RTF1-201ENST00000389629 ODF3Q96PU9 254 aa10.5□□□□□ -0.73
RTF1-201ENST00000389629 PYGO1Q9Y3Y4 419 aa10.49□□□□□ -0.73
RTF1-201ENST00000389629 C19orf84I3L1E1 186 aa10.49□□□□□ -0.73
RTF1-201ENST00000389629 USP17L23D6RBM5 183 aa10.49□□□□□ -0.73
RTF1-201ENST00000389629 DAD1P61803 113 aa10.49□□□□□ -0.73
RTF1-201ENST00000389629 FAM240AA0A1B0GVK7 77 aa10.49□□□□□ -0.73
RTF1-201ENST00000389629 ENHOQ6UWT2 76 aa10.49□□□□□ -0.73
RTF1-201ENST00000389629 C9orf85Q96MD7 179 aa10.49□□□□□ -0.73
RTF1-201ENST00000389629 JMJD7-PLA2G4BH0Y9G9 81 aa10.48□□□□□ -0.73
RTF1-201ENST00000389629 CMC4P56277 68 aaPredicted RBP10.48□□□□□ -0.73
RTF1-201ENST00000389629 MRPS36P82909 103 aaKnown RBP10.48□□□□□ -0.73
RTF1-201ENST00000389629 RPL18AQ02543 176 aaKnown RBP10.48□□□□□ -0.73
RTF1-201ENST00000389629 DCANP1Q8TF63 244 aa10.48□□□□□ -0.73
RTF1-201ENST00000389629 FHL3Q13643 280 aa10.48□□□□□ -0.73
RTF1-201ENST00000389629 A0A087WVE0 104 aa10.47□□□□□ -0.73
RTF1-201ENST00000389629 SERP2Q8N6R1 65 aa10.47□□□□□ -0.73
RTF1-201ENST00000389629 UPK3BQ9BT76 320 aa10.47□□□□□ -0.73
RTF1-201ENST00000389629 Q6ZTI0 123 aa10.46□□□□□ -0.73
RTF1-201ENST00000389629 NBEAQ8NFP9 2946 aa10.46□□□□□ -0.73
RTF1-201ENST00000389629 J3QLI3 93 aa10.46□□□□□ -0.73
RTF1-201ENST00000389629 WFDC9Q8NEX5 89 aa10.46□□□□□ -0.73
RTF1-201ENST00000389629 UBE2D4Q9Y2X8 147 aa10.46□□□□□ -0.73
RTF1-201ENST00000389629 PRB2P02812 416 aaPredicted RBP10.46□□□□□ -0.74
RTF1-201ENST00000389629 TIMM17BO60830 172 aa10.44□□□□□ -0.74
RTF1-201ENST00000389629 TMEM258P61165 79 aa10.44□□□□□ -0.74
RTF1-201ENST00000389629 FAM19A5Q7Z5A7 132 aaPredicted RBP10.44□□□□□ -0.74
RTF1-201ENST00000389629 ESM1Q9NQ30 184 aa10.44□□□□□ -0.74
RTF1-201ENST00000389629 WDFY4Q6ZS81 3184 aa10.44□□□□□ -0.74
RTF1-201ENST00000389629 A0A1W2PPR1 153 aa10.44□□□□□ -0.74
RTF1-201ENST00000389629 SMIM9A6NGZ8 99 aa10.44□□□□□ -0.74
RTF1-201ENST00000389629 BRK1Q8WUW1 75 aa10.44□□□□□ -0.74
RTF1-201ENST00000389629 F5H768 121 aa10.43□□□□□ -0.74
RTF1-201ENST00000389629 TMEM256-PLSCR3K7ERE1 68 aa10.43□□□□□ -0.74
RTF1-201ENST00000389629 HRCT1Q6UXD1 115 aa10.43□□□□□ -0.74
RTF1-201ENST00000389629 LINC00526Q96FQ7 95 aa10.43□□□□□ -0.74
RTF1-201ENST00000389629 MAP6D1Q9H9H5 199 aa10.43□□□□□ -0.74
RTF1-201ENST00000389629 GYPEP15421 78 aa10.43□□□□□ -0.74
RTF1-201ENST00000389629 FAM236DA0A1B0GTK5 79 aa10.42□□□□□ -0.74
RTF1-201ENST00000389629 FAM236CP0DP71 79 aa10.42□□□□□ -0.74
RTF1-201ENST00000389629 LRRC75A-AS1Q8N1F1 130 aa10.42□□□□□ -0.74
RTF1-201ENST00000389629 PKIGQ9Y2B9 76 aa10.42□□□□□ -0.74
RTF1-201ENST00000389629 TMEM89A2RUT3 159 aa10.42□□□□□ -0.74
RTF1-201ENST00000389629 ZNF561-AS1K7EIQ3 104 aa10.42□□□□□ -0.74
RTF1-201ENST00000389629 SCXQ7RTU7 201 aa10.41□□□□□ -0.74
RTF1-201ENST00000389629 DEFB105AQ8NG35 78 aa10.41□□□□□ -0.74
RTF1-201ENST00000389629 SMIM11BQ8TCY0 68 aa10.41□□□□□ -0.74
RTF1-201ENST00000389629 Q96MF0 132 aa10.41□□□□□ -0.74
RTF1-201ENST00000389629 CHD8Q9HCK8 2581 aa10.41□□□□□ -0.74
RTF1-201ENST00000389629 KIF25-AS1Q9Y6Z4 181 aa10.41□□□□□ -0.74
RTF1-201ENST00000389629 PKD1L2Q7Z442 2459 aa10.41□□□□□ -0.74
RTF1-201ENST00000389629 IGLV1-40P01703 118 aa10.41□□□□□ -0.74
RTF1-201ENST00000389629 CITED2Q99967 270 aaPredicted RBP10.4□□□□□ -0.74
RTF1-201ENST00000389629 IGHV4-28A0A0C4DH34 117 aa10.4□□□□□ -0.74
RTF1-201ENST00000389629 CCL24O00175 119 aa10.4□□□□□ -0.74
RTF1-201ENST00000389629 CXCL5P42830 114 aa10.4□□□□□ -0.74
RTF1-201ENST00000389629 DSPP15924 2871 aaKnown RBP10.39□□□□□ -0.75
RTF1-201ENST00000389629 TRBV10-1A0A0K0K1A3 114 aa10.39□□□□□ -0.75
RTF1-201ENST00000389629 COX6A2Q02221 97 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms