RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 DAZ4Q86SG3 579 aaKnown RBP10.15□□□□□ -0.78
SDC1-202ENST00000381150 DAZ3Q9NR90 486 aaKnown RBP10.15□□□□□ -0.78
SDC1-202ENST00000381150 SNRPD3P62318 126 aaKnown RBP10.14□□□□□ -0.79
SDC1-202ENST00000381150 HERVK_113P63121 156 aa10.14□□□□□ -0.79
SDC1-202ENST00000381150 NSUN5P1Q3KNT7 163 aa10.14□□□□□ -0.79
SDC1-202ENST00000381150 BAALC-AS2P0C853 105 aa10.14□□□□□ -0.79
SDC1-202ENST00000381150 IGKV3D-7A0A0C4DH55 119 aa10.13□□□□□ -0.79
SDC1-202ENST00000381150 KLLNB2CW77 178 aa10.13□□□□□ -0.79
SDC1-202ENST00000381150 VSIG2Q96IQ7 327 aa10.13□□□□□ -0.79
SDC1-202ENST00000381150 LINC01587Q99440 93 aa10.13□□□□□ -0.79
SDC1-202ENST00000381150 LITAFQ99732 161 aa10.13□□□□□ -0.79
SDC1-202ENST00000381150 C10orf99Q6UWK7 81 aa10.13□□□□□ -0.79
SDC1-202ENST00000381150 NDUFA7O95182 113 aa10.12□□□□□ -0.79
SDC1-202ENST00000381150 DSCR9P59020 149 aa10.12□□□□□ -0.79
SDC1-202ENST00000381150 Q8N2B8 174 aa10.12□□□□□ -0.79
SDC1-202ENST00000381150 SMCR5Q8TEV8 140 aa10.12□□□□□ -0.79
SDC1-202ENST00000381150 FAM19A4Q96LR4 140 aa10.12□□□□□ -0.79
SDC1-202ENST00000381150 LRRK2Q5S007 2527 aa10.12□□□□□ -0.79
SDC1-202ENST00000381150 SDIM1Q6ZPB5 146 aa10.12□□□□□ -0.79
SDC1-202ENST00000381150 PRIMA1Q86XR5 153 aa10.12□□□□□ -0.79
SDC1-202ENST00000381150 TMEM126AQ9H061 195 aa10.12□□□□□ -0.79
SDC1-202ENST00000381150 USP24Q9UPU5 2620 aa10.12□□□□□ -0.79
SDC1-202ENST00000381150 TRBV6-5A0A0K0K1A5 114 aa10.11□□□□□ -0.79
SDC1-202ENST00000381150 TOMM7Q9P0U1 55 aa10.11□□□□□ -0.79
SDC1-202ENST00000381150 hADV29S1A0JD25 119 aa10.11□□□□□ -0.79
SDC1-202ENST00000381150 PRB1P04280 392 aa10.11□□□□□ -0.79
SDC1-202ENST00000381150 NBEAL2Q6ZNJ1 2754 aa10.1□□□□□ -0.79
SDC1-202ENST00000381150 PIK3CD-AS1Q5SR53 167 aa10.1□□□□□ -0.79
SDC1-202ENST00000381150 BBC3Q96PG8 261 aaPredicted RBP10.1□□□□□ -0.79
SDC1-202ENST00000381150 NF1P21359 2839 aa10.1□□□□□ -0.79
SDC1-202ENST00000381150 IGHV4-59P01825 116 aa10.1□□□□□ -0.79
SDC1-202ENST00000381150 DEFB112Q30KQ8 113 aa10.1□□□□□ -0.79
SDC1-202ENST00000381150 LINC00467Q9BRT7 94 aa10.1□□□□□ -0.79
SDC1-202ENST00000381150 PSMB8P28062 276 aa10.09□□□□□ -0.79
SDC1-202ENST00000381150 C3orf22Q8N5N4 141 aa10.09□□□□□ -0.79
SDC1-202ENST00000381150 MTORP42345 2549 aa10.09□□□□□ -0.79
SDC1-202ENST00000381150 UBR5O95071 2799 aaPredicted RBP10.09□□□□□ -0.79
SDC1-202ENST00000381150 APRG1Q8IVJ8 170 aa10.09□□□□□ -0.79
SDC1-202ENST00000381150 CHD6Q8TD26 2715 aa10.09□□□□□ -0.79
SDC1-202ENST00000381150 IGHV3-53P01767 116 aa10.09□□□□□ -0.79
SDC1-202ENST00000381150 KHDC1LQ5JSQ8 128 aa10.09□□□□□ -0.79
SDC1-202ENST00000381150 LINC01356Q8N9X3 169 aa10.09□□□□□ -0.79
SDC1-202ENST00000381150 MRPS36P82909 103 aaKnown RBP10.08□□□□□ -0.8
SDC1-202ENST00000381150 CITED2Q99967 270 aaPredicted RBP10.08□□□□□ -0.8
SDC1-202ENST00000381150 DNAL4O96015 105 aa10.08□□□□□ -0.8
SDC1-202ENST00000381150 Q6ZSN1 163 aa10.08□□□□□ -0.8
SDC1-202ENST00000381150 LINC00308Q8TCZ7 52 aa10.08□□□□□ -0.8
SDC1-202ENST00000381150 DCANP1Q8TF63 244 aa10.08□□□□□ -0.8
SDC1-202ENST00000381150 C9orf85Q96MD7 179 aa10.08□□□□□ -0.8
SDC1-202ENST00000381150 MXRA5Q9NR99 2828 aa10.07□□□□□ -0.8
SDC1-202ENST00000381150 K7EMT4 169 aa10.07□□□□□ -0.8
SDC1-202ENST00000381150 TIRAPP58753 221 aa10.07□□□□□ -0.8
SDC1-202ENST00000381150 ANKRD17O75179 2603 aaKnown RBP10.07□□□□□ -0.8
SDC1-202ENST00000381150 A0A0J9YX75 114 aa10.07□□□□□ -0.8
SDC1-202ENST00000381150 RNASE1P07998 156 aaKnown RBP10.07□□□□□ -0.8
SDC1-202ENST00000381150 LINC00643Q86TS7 51 aa10.07□□□□□ -0.8
SDC1-202ENST00000381150 SPANXDQ9BXN6 97 aa10.07□□□□□ -0.8
SDC1-202ENST00000381150 SPANXCQ9NY87 97 aa10.07□□□□□ -0.8
SDC1-202ENST00000381150 A0A087WVE0 104 aa10.06□□□□□ -0.8
SDC1-202ENST00000381150 TINCRA0A1B0GVN0 87 aa10.06□□□□□ -0.8
SDC1-202ENST00000381150 COX6A2Q02221 97 aa10.06□□□□□ -0.8
SDC1-202ENST00000381150 TRBV7-7A0A0K0K1E9 115 aa10.06□□□□□ -0.8
SDC1-202ENST00000381150 HIST1H4AP62805 103 aaKnown RBP10.06□□□□□ -0.8
SDC1-202ENST00000381150 MAPK1IP1LQ8NDC0 245 aa10.06□□□□□ -0.8
SDC1-202ENST00000381150 ZNF462Q96JM2 2506 aa10.06□□□□□ -0.8
SDC1-202ENST00000381150 ATP5G1P05496 136 aa10.06□□□□□ -0.8
SDC1-202ENST00000381150 OR13C6PQ8NH95 151 aa10.06□□□□□ -0.8
SDC1-202ENST00000381150 C14orf132Q9NPU4 83 aa10.06□□□□□ -0.8
SDC1-202ENST00000381150 FAM240AA0A1B0GVK7 77 aa10.05□□□□□ -0.8
SDC1-202ENST00000381150 COX7A2LO14548 114 aa10.05□□□□□ -0.8
SDC1-202ENST00000381150 UQCRQO14949 82 aa10.05□□□□□ -0.8
SDC1-202ENST00000381150 FSHBP01225 129 aa10.05□□□□□ -0.8
SDC1-202ENST00000381150 DEFB131AP59861 70 aa10.05□□□□□ -0.8
SDC1-202ENST00000381150 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.05□□□□□ -0.8
SDC1-202ENST00000381150 FAM19A5Q7Z5A7 132 aaPredicted RBP10.05□□□□□ -0.8
SDC1-202ENST00000381150 CSDC2Q9Y534 153 aaKnown RBP10.05□□□□□ -0.8
SDC1-202ENST00000381150 CR1P17927 2039 aa10.05□□□□□ -0.8
SDC1-202ENST00000381150 A0A1B0GX51 115 aa10.04□□□□□ -0.8
SDC1-202ENST00000381150 J3QLI3 93 aa10.04□□□□□ -0.8
SDC1-202ENST00000381150 C11orf68Q9H3H3 251 aaKnown RBP10.04□□□□□ -0.8
SDC1-202ENST00000381150 FAM218AQ96MZ4 157 aa10.04□□□□□ -0.8
SDC1-202ENST00000381150 SPANXA1Q9NS26 97 aa10.04□□□□□ -0.8
SDC1-202ENST00000381150 KRTAP10-9P60411 292 aa10.03□□□□□ -0.8
SDC1-202ENST00000381150 UBE2D4Q9Y2X8 147 aa10.03□□□□□ -0.8
SDC1-202ENST00000381150 TMEM89A2RUT3 159 aa10.03□□□□□ -0.8
SDC1-202ENST00000381150 PEMTQ9UBM1 199 aa10.03□□□□□ -0.8
SDC1-202ENST00000381150 ACYP1P07311 99 aa10.02□□□□□ -0.8
SDC1-202ENST00000381150 SOSTDC1Q6X4U4 206 aa10.02□□□□□ -0.81
SDC1-202ENST00000381150 ZNF843Q8N446 348 aa10.02□□□□□ -0.81
SDC1-202ENST00000381150 ZNF469Q96JG9 3925 aaPredicted RBP10.02□□□□□ -0.81
SDC1-202ENST00000381150 RBMY1A1P0DJD3 496 aaKnown RBP10.02□□□□□ -0.81
SDC1-202ENST00000381150 RBMY1CP0DJD4 496 aa10.02□□□□□ -0.81
SDC1-202ENST00000381150 RBMY1FQ15415 496 aaKnown RBP10.02□□□□□ -0.81
SDC1-202ENST00000381150 DEFB136Q30KP8 78 aa10.02□□□□□ -0.81
SDC1-202ENST00000381150 SLPIP03973 132 aa10.01□□□□□ -0.81
SDC1-202ENST00000381150 KIR2DL5BQ8NHK3 375 aa10.01□□□□□ -0.81
SDC1-202ENST00000381150 DNAJC30Q96LL9 226 aa10.01□□□□□ -0.81
SDC1-202ENST00000381150 J3KT08 172 aa10.01□□□□□ -0.81
SDC1-202ENST00000381150 Q6YL49 198 aa10.01□□□□□ -0.81
SDC1-202ENST00000381150 FAM104AQ969W3 186 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms