RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 LINC00588Q9Y4M8 146 aa14□□□□□ -0.17
TSSC4-203ENST00000380996 RBX1P62877 108 aa14□□□□□ -0.17
TSSC4-203ENST00000380996 PET117Q6UWS5 81 aa14□□□□□ -0.17
TSSC4-203ENST00000380996 SPATA12Q7Z6I5 190 aa14□□□□□ -0.17
TSSC4-203ENST00000380996 H0Y8G0 127 aa13.99□□□□□ -0.17
TSSC4-203ENST00000380996 PMVKQ15126 192 aa13.99□□□□□ -0.17
TSSC4-203ENST00000380996 MPV17L2Q567V2 206 aa13.99□□□□□ -0.17
TSSC4-203ENST00000380996 TEX43Q6ZNM6 134 aa13.99□□□□□ -0.17
TSSC4-203ENST00000380996 ZNF664Q8N3J9 261 aa13.99□□□□□ -0.17
TSSC4-203ENST00000380996 CDC42SE2Q9NRR3 84 aa13.99□□□□□ -0.17
TSSC4-203ENST00000380996 Q6ZUT4 128 aa13.98□□□□□ -0.17
TSSC4-203ENST00000380996 TRAV12-1A0A0B4J245 112 aa13.97□□□□□ -0.17
TSSC4-203ENST00000380996 C20orf202A1L168 122 aa13.97□□□□□ -0.17
TSSC4-203ENST00000380996 WFDC10BQ8IUB3 73 aa13.97□□□□□ -0.17
TSSC4-203ENST00000380996 Q8N976 141 aa13.97□□□□□ -0.17
TSSC4-203ENST00000380996 AMELXQ99217 191 aa13.97□□□□□ -0.17
TSSC4-203ENST00000380996 IGLV4-60A0A075B6I1 120 aa13.96□□□□□ -0.17
TSSC4-203ENST00000380996 FAM104AQ969W3 186 aa13.96□□□□□ -0.17
TSSC4-203ENST00000380996 C2orf88Q9BSF0 95 aa13.96□□□□□ -0.17
TSSC4-203ENST00000380996 UPK3BQ9BT76 320 aa13.96□□□□□ -0.17
TSSC4-203ENST00000380996 CST9LQ9H4G1 147 aa13.96□□□□□ -0.17
TSSC4-203ENST00000380996 DNAH7Q8WXX0 4024 aa13.95□□□□□ -0.18
TSSC4-203ENST00000380996 PRSS29PA6NIE9 313 aa13.95□□□□□ -0.18
TSSC4-203ENST00000380996 UBE2DNLQ8IWF7 75 aa13.95□□□□□ -0.18
TSSC4-203ENST00000380996 RNASE13Q5GAN3 156 aaKnown RBP13.95□□□□□ -0.18
TSSC4-203ENST00000380996 LGALS9CQ6DKI2 356 aa13.95□□□□□ -0.18
TSSC4-203ENST00000380996 DYNC2H1Q8NCM8 4307 aaKnown RBP13.94□□□□□ -0.18
TSSC4-203ENST00000380996 C3orf84H3BNL1 204 aa13.94□□□□□ -0.18
TSSC4-203ENST00000380996 ANGP03950 147 aaKnown RBP13.94□□□□□ -0.18
TSSC4-203ENST00000380996 LINC01556Q5JQF7 62 aa13.94□□□□□ -0.18
TSSC4-203ENST00000380996 SIVA1O15304 175 aa13.93□□□□□ -0.18
TSSC4-203ENST00000380996 SCGB1D1O95968 90 aa13.93□□□□□ -0.18
TSSC4-203ENST00000380996 ZC2HC1BQ5TFG8 222 aa13.93□□□□□ -0.18
TSSC4-203ENST00000380996 LINC01545Q5VT33 79 aa13.93□□□□□ -0.18
TSSC4-203ENST00000380996 IGHV3-30P01768 117 aa13.92□□□□□ -0.18
TSSC4-203ENST00000380996 IGHV3-33P01772 117 aa13.92□□□□□ -0.18
TSSC4-203ENST00000380996 DNAH10OSP0CZ25 163 aa13.92□□□□□ -0.18
TSSC4-203ENST00000380996 IGHV3-30-3P0DP02 117 aa13.92□□□□□ -0.18
TSSC4-203ENST00000380996 IGHV3-30-5P0DP03 117 aa13.92□□□□□ -0.18
TSSC4-203ENST00000380996 ODF1Q14990 250 aa13.92□□□□□ -0.18
TSSC4-203ENST00000380996 JOSD1Q15040 202 aaPredicted RBP13.92□□□□□ -0.18
TSSC4-203ENST00000380996 CHTOPQ9Y3Y2 248 aaKnown RBP13.92□□□□□ -0.18
TSSC4-203ENST00000380996 Q8N3U1 123 aa13.91□□□□□ -0.18
TSSC4-203ENST00000380996 F8VRH5 84 aa13.9□□□□□ -0.18
TSSC4-203ENST00000380996 CASC10Q5T4H9 136 aa13.9□□□□□ -0.19
TSSC4-203ENST00000380996 LINC00269Q8N2A0 174 aa13.9□□□□□ -0.19
TSSC4-203ENST00000380996 Q9H8V8 135 aa13.9□□□□□ -0.19
TSSC4-203ENST00000380996 MRPL35Q9NZE8 188 aaKnown RBP13.9□□□□□ -0.19
TSSC4-203ENST00000380996 PMCHL2Q9BQD1 86 aa13.89□□□□□ -0.19
TSSC4-203ENST00000380996 KLK12Q9UKR0 248 aa13.89□□□□□ -0.19
TSSC4-203ENST00000380996 TRAV13-1A0A0B4J241 112 aa13.88□□□□□ -0.19
TSSC4-203ENST00000380996 UBE2D1P51668 147 aa13.88□□□□□ -0.19
TSSC4-203ENST00000380996 REG3AQ06141 175 aa13.88□□□□□ -0.19
TSSC4-203ENST00000380996 IGKV3OR2-268A0A0C4DH90 116 aa13.87□□□□□ -0.19
TSSC4-203ENST00000380996 DPM2O94777 84 aa13.87□□□□□ -0.19
TSSC4-203ENST00000380996 PLNP26678 52 aa13.87□□□□□ -0.19
TSSC4-203ENST00000380996 SEC11AP67812 179 aa13.87□□□□□ -0.19
TSSC4-203ENST00000380996 PYY3Q5JQD4 70 aa13.87□□□□□ -0.19
TSSC4-203ENST00000380996 TRAV9-2A0A087WT02 112 aa13.86□□□□□ -0.19
TSSC4-203ENST00000380996 K7EP13 123 aa13.86□□□□□ -0.19
TSSC4-203ENST00000380996 CCL25O15444 150 aa13.86□□□□□ -0.19
TSSC4-203ENST00000380996 CRPP02741 224 aa13.86□□□□□ -0.19
TSSC4-203ENST00000380996 CSMD3Q7Z407 3707 aa13.86□□□□□ -0.19
TSSC4-203ENST00000380996 IGKCP01834 107 aa13.85□□□□□ -0.19
TSSC4-203ENST00000380996 SS18Q15532 418 aa13.85□□□□□ -0.19
TSSC4-203ENST00000380996 C10orf126Q8N4M7 172 aa13.85□□□□□ -0.19
TSSC4-203ENST00000380996 PRR34Q9NV39 138 aa13.85□□□□□ -0.19
TSSC4-203ENST00000380996 A0A0J9YXV3 536 aa13.85□□□□□ -0.19
TSSC4-203ENST00000380996 LINC00959A0A1B0GUT2 108 aa13.85□□□□□ -0.19
TSSC4-203ENST00000380996 IGLC3P0DOY3 106 aa13.85□□□□□ -0.19
TSSC4-203ENST00000380996 CLPSL2Q6UWE3 100 aa13.85□□□□□ -0.19
TSSC4-203ENST00000380996 IGLV4-69A0A075B6H9 119 aa13.84□□□□□ -0.19
TSSC4-203ENST00000380996 TINCRA0A1B0GVN0 87 aa13.84□□□□□ -0.19
TSSC4-203ENST00000380996 FAM19A3Q7Z5A8 133 aa13.84□□□□□ -0.19
TSSC4-203ENST00000380996 GEMIN7Q9H840 131 aaKnown RBP13.84□□□□□ -0.19
TSSC4-203ENST00000380996 SMIM6P0DI80 62 aa13.83□□□□□ -0.2
TSSC4-203ENST00000380996 HERVK_113P63121 156 aa13.83□□□□□ -0.2
TSSC4-203ENST00000380996 NFE4Q86UQ8 179 aa13.83□□□□□ -0.2
TSSC4-203ENST00000380996 UBE2WQ96B02 151 aa13.83□□□□□ -0.2
TSSC4-203ENST00000380996 CHAC1Q9BUX1 264 aa13.83□□□□□ -0.2
TSSC4-203ENST00000380996 LINC00242Q5T6M2 205 aa13.82□□□□□ -0.2
TSSC4-203ENST00000380996 TRAV8-4A0A0B4J246 113 aa13.81□□□□□ -0.2
TSSC4-203ENST00000380996 MIAQ16674 131 aa13.81□□□□□ -0.2
TSSC4-203ENST00000380996 ENHOQ6UWT2 76 aa13.81□□□□□ -0.2
TSSC4-203ENST00000380996 ATOH7Q8N100 152 aa13.81□□□□□ -0.2
TSSC4-203ENST00000380996 C11orf86A6NJI1 115 aa13.8□□□□□ -0.2
TSSC4-203ENST00000380996 STARD9Q9P2P6 4700 aa13.8□□□□□ -0.2
TSSC4-203ENST00000380996 IBA57-AS1B1ANH7 110 aa13.8□□□□□ -0.2
TSSC4-203ENST00000380996 PLECQ15149 4684 aaKnown RBP13.8□□□□□ -0.2
TSSC4-203ENST00000380996 TRAV8-3A0A0A6YYJ7 113 aa13.79□□□□□ -0.2
TSSC4-203ENST00000380996 TMEM170BQ5T4T1 132 aa13.79□□□□□ -0.2
TSSC4-203ENST00000380996 LINC00469Q8N7U9 141 aa13.78□□□□□ -0.2
TSSC4-203ENST00000380996 HSBP1L1C9JCN9 74 aa13.77□□□□□ -0.21
TSSC4-203ENST00000380996 XCL1P47992 114 aa13.77□□□□□ -0.21
TSSC4-203ENST00000380996 TTC32Q5I0X7 151 aa13.77□□□□□ -0.21
TSSC4-203ENST00000380996 CHCHD10Q8WYQ3 142 aaPredicted RBP13.77□□□□□ -0.21
TSSC4-203ENST00000380996 IGLV10-54A0A075B6I4 117 aa13.76□□□□□ -0.21
TSSC4-203ENST00000380996 IGLV5-45A0A087WSX0 123 aa13.76□□□□□ -0.21
TSSC4-203ENST00000380996 H3BRM9 83 aa13.76□□□□□ -0.21
TSSC4-203ENST00000380996 ZNF22P17026 224 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms