RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 LINC00308Q8TCZ7 52 aa5.28□□□□□ -1.56
CCDC171-201ENST00000380701 TP73-AS1Q9UF72 201 aa5.28□□□□□ -1.56
CCDC171-201ENST00000380701 C2orf16Q68DN1 1984 aa5.28□□□□□ -1.56
CCDC171-201ENST00000380701 FAM19A5Q7Z5A7 132 aaPredicted RBP5.28□□□□□ -1.56
CCDC171-201ENST00000380701 LINC01561Q8N1V8 128 aa5.28□□□□□ -1.56
CCDC171-201ENST00000380701 DEFB1P60022 68 aa5.27□□□□□ -1.57
CCDC171-201ENST00000380701 DCANP1Q8TF63 244 aa5.27□□□□□ -1.57
CCDC171-201ENST00000380701 LINC00959A0A1B0GUT2 108 aa5.27□□□□□ -1.57
CCDC171-201ENST00000380701 FXYD2P54710 66 aa5.27□□□□□ -1.57
CCDC171-201ENST00000380701 DAND5Q8N907 189 aa5.27□□□□□ -1.57
CCDC171-201ENST00000380701 PRR15LQ9BU68 103 aa5.27□□□□□ -1.57
CCDC171-201ENST00000380701 DYSFO75923 2080 aa5.26□□□□□ -1.57
CCDC171-201ENST00000380701 Q6JHZ5 121 aa5.26□□□□□ -1.57
CCDC171-201ENST00000380701 CNFNQ9BYD5 112 aa5.26□□□□□ -1.57
CCDC171-201ENST00000380701 COL5A1P20908 1838 aaPredicted RBP5.26□□□□□ -1.57
CCDC171-201ENST00000380701 PLXNB3Q9ULL4 1909 aa5.26□□□□□ -1.57
CCDC171-201ENST00000380701 ATP5EP56381 51 aaPredicted RBP5.26□□□□□ -1.57
CCDC171-201ENST00000380701 DENND4CQ5VZ89 1909 aa5.26□□□□□ -1.57
CCDC171-201ENST00000380701 TAX1BP3O14907 124 aa5.26□□□□□ -1.57
CCDC171-201ENST00000380701 A0A0J9YWU9 116 aa5.25□□□□□ -1.57
CCDC171-201ENST00000380701 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.25□□□□□ -1.57
CCDC171-201ENST00000380701 LRCOL1A6NCL2 159 aa5.25□□□□□ -1.57
CCDC171-201ENST00000380701 LINC00173Q6ZV60 143 aa5.25□□□□□ -1.57
CCDC171-201ENST00000380701 POLR2KP53803 58 aaKnown RBP5.25□□□□□ -1.57
CCDC171-201ENST00000380701 FOXI1Q12951 378 aa5.25□□□□□ -1.57
CCDC171-201ENST00000380701 RNF185Q96GF1 192 aa5.25□□□□□ -1.57
CCDC171-201ENST00000380701 C2orf48Q96LS8 159 aa5.25□□□□□ -1.57
CCDC171-201ENST00000380701 V9GYY9 64 aa5.25□□□□□ -1.57
CCDC171-201ENST00000380701 COL4A3Q01955 1670 aa5.25□□□□□ -1.57
CCDC171-201ENST00000380701 FRMD6-AS1P0C7T7 363 aa5.25□□□□□ -1.57
CCDC171-201ENST00000380701 CSPG4Q6UVK1 2322 aa5.25□□□□□ -1.57
CCDC171-201ENST00000380701 PLAC8L1A1L4L8 177 aa5.24□□□□□ -1.57
CCDC171-201ENST00000380701 TSHBP01222 138 aa5.24□□□□□ -1.57
CCDC171-201ENST00000380701 ODF3L2Q3SX64 289 aa5.24□□□□□ -1.57
CCDC171-201ENST00000380701 CEMP1Q6PRD7 247 aaPredicted RBP5.24□□□□□ -1.57
CCDC171-201ENST00000380701 MRPL55Q7Z7F7 128 aaKnown RBP5.24□□□□□ -1.57
CCDC171-201ENST00000380701 CSDC2Q9Y534 153 aaKnown RBP5.24□□□□□ -1.57
CCDC171-201ENST00000380701 KMT2EQ8IZD2 1858 aa5.24□□□□□ -1.57
CCDC171-201ENST00000380701 NDUFC1O43677 76 aa5.24□□□□□ -1.57
CCDC171-201ENST00000380701 SONP18583 2426 aaKnown RBP5.24□□□□□ -1.57
CCDC171-201ENST00000380701 IGKV3D-7A0A0C4DH55 119 aa5.24□□□□□ -1.57
CCDC171-201ENST00000380701 RNASE3P12724 160 aaKnown RBP5.24□□□□□ -1.57
CCDC171-201ENST00000380701 C1orf134Q5TEV5 83 aa5.24□□□□□ -1.57
CCDC171-201ENST00000380701 PLA2G2EQ9NZK7 142 aa5.24□□□□□ -1.57
CCDC171-201ENST00000380701 CRIP3Q6Q6R5 217 aa5.24□□□□□ -1.57
CCDC171-201ENST00000380701 KIF26AQ9ULI4 1882 aaPredicted RBP5.24□□□□□ -1.57
CCDC171-201ENST00000380701 PLCE1Q9P212 2302 aa5.24□□□□□ -1.57
CCDC171-201ENST00000380701 CLEC2BQ92478 149 aa5.23□□□□□ -1.57
CCDC171-201ENST00000380701 C6orf99Q4VX62 202 aa5.23□□□□□ -1.57
CCDC171-201ENST00000380701 OBSL1O75147 1896 aa5.23□□□□□ -1.57
CCDC171-201ENST00000380701 SHANK1Q9Y566 2161 aa5.23□□□□□ -1.57
CCDC171-201ENST00000380701 C5orf47Q569G3 176 aa5.23□□□□□ -1.57
CCDC171-201ENST00000380701 OXLD1Q5BKU9 147 aa5.23□□□□□ -1.57
CCDC171-201ENST00000380701 DSCAMO60469 2012 aa5.23□□□□□ -1.57
CCDC171-201ENST00000380701 ZNF73O43830 326 aaPredicted RBP5.23□□□□□ -1.57
CCDC171-201ENST00000380701 C1orf229Q6ZS94 237 aaPredicted RBP5.23□□□□□ -1.57
CCDC171-201ENST00000380701 PTPN13Q12923 2485 aa5.23□□□□□ -1.57
CCDC171-201ENST00000380701 ZNF106Q9H2Y7 1883 aaKnown RBP5.23□□□□□ -1.57
CCDC171-201ENST00000380701 IGLV2-18A0A075B6J9 118 aa5.23□□□□□ -1.57
CCDC171-201ENST00000380701 IGLV5-52A0A0A0MRZ9 124 aa5.23□□□□□ -1.57
CCDC171-201ENST00000380701 FAM236AA0A1B0GUQ0 79 aa5.23□□□□□ -1.57
CCDC171-201ENST00000380701 FAM236BA0A1B0GV22 79 aa5.23□□□□□ -1.57
CCDC171-201ENST00000380701 NANOS2P60321 138 aaKnown RBP5.23□□□□□ -1.57
CCDC171-201ENST00000380701 C10orf99Q6UWK7 81 aa5.22□□□□□ -1.57
CCDC171-201ENST00000380701 XAGE1AQ9HD64 81 aa5.22□□□□□ -1.57
CCDC171-201ENST00000380701 J3KT08 172 aa5.22□□□□□ -1.57
CCDC171-201ENST00000380701 CCKP06307 115 aa5.22□□□□□ -1.57
CCDC171-201ENST00000380701 Q8N2B8 174 aa5.22□□□□□ -1.57
CCDC171-201ENST00000380701 CDC42SE2Q9NRR3 84 aa5.22□□□□□ -1.57
CCDC171-201ENST00000380701 KIAA1549LQ6ZVL6 1849 aa5.22□□□□□ -1.57
CCDC171-201ENST00000380701 IGLV2-11P01706 119 aa5.22□□□□□ -1.57
CCDC171-201ENST00000380701 ZNF295-AS1Q8N0V1 137 aa5.22□□□□□ -1.57
CCDC171-201ENST00000380701 CHD3Q12873 2000 aaKnown RBP5.22□□□□□ -1.57
CCDC171-201ENST00000380701 C10orf25Q5T742 122 aa5.22□□□□□ -1.57
CCDC171-201ENST00000380701 GDF5OSQ5U4N7 250 aa5.22□□□□□ -1.57
CCDC171-201ENST00000380701 Q6ZPA2 131 aa5.22□□□□□ -1.57
CCDC171-201ENST00000380701 COX8CQ7Z4L0 72 aa5.22□□□□□ -1.57
CCDC171-201ENST00000380701 A0A1B0GUV1 79 aa5.21□□□□□ -1.57
CCDC171-201ENST00000380701 BEAN1Q3B7T3 259 aa5.21□□□□□ -1.58
CCDC171-201ENST00000380701 LIMD2Q9BT23 127 aa5.21□□□□□ -1.58
CCDC171-201ENST00000380701 IMUPQ9GZP8 106 aa5.21□□□□□ -1.58
CCDC171-201ENST00000380701 ADAMTS9Q9P2N4 1935 aa5.21□□□□□ -1.58
CCDC171-201ENST00000380701 NUPR1O60356 82 aa5.21□□□□□ -1.58
CCDC171-201ENST00000380701 AVPP01185 164 aa5.21□□□□□ -1.58
CCDC171-201ENST00000380701 NRACQ8N912 160 aa5.2□□□□□ -1.58
CCDC171-201ENST00000380701 NUP210LQ5VU65 1888 aa5.2□□□□□ -1.58
CCDC171-201ENST00000380701 CRIP1P50238 77 aa5.2□□□□□ -1.58
CCDC171-201ENST00000380701 M0R2N4 97 aa5.2□□□□□ -1.58
CCDC171-201ENST00000380701 PROK1P58294 105 aa5.2□□□□□ -1.58
CCDC171-201ENST00000380701 H3BNG1 76 aa5.2□□□□□ -1.58
CCDC171-201ENST00000380701 M0QXV9 152 aa5.2□□□□□ -1.58
CCDC171-201ENST00000380701 PRYO14603 147 aa5.2□□□□□ -1.58
CCDC171-201ENST00000380701 Q8N9L7 120 aa5.19□□□□□ -1.58
CCDC171-201ENST00000380701 SERP1Q9Y6X1 66 aa5.19□□□□□ -1.58
CCDC171-201ENST00000380701 MUC22E2RYF6 1773 aaPredicted RBP5.19□□□□□ -1.58
CCDC171-201ENST00000380701 TNCP24821 2201 aa5.19□□□□□ -1.58
CCDC171-201ENST00000380701 FHL3Q13643 280 aa5.19□□□□□ -1.58
CCDC171-201ENST00000380701 ALPK3Q96L96 1907 aa5.19□□□□□ -1.58
CCDC171-201ENST00000380701 CYSRT1A8MQ03 144 aa5.19□□□□□ -1.58
CCDC171-201ENST00000380701 B5MCH6 92 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms