RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 KIR2DL5BQ8NHK3 375 aa12.6□□□□□ -0.39
COL4A3BP-203ENST00000380494 DEFB4AO15263 64 aa12.6□□□□□ -0.39
COL4A3BP-203ENST00000380494 RPL28P46779 137 aaKnown RBP12.6□□□□□ -0.39
COL4A3BP-203ENST00000380494 C4orf48Q5BLP8 95 aa12.6□□□□□ -0.39
COL4A3BP-203ENST00000380494 ZDBF2Q9HCK1 2354 aa12.58□□□□□ -0.39
COL4A3BP-203ENST00000380494 FAM19A1Q7Z5A9 133 aa12.58□□□□□ -0.39
COL4A3BP-203ENST00000380494 C3orf84H3BNL1 204 aa12.58□□□□□ -0.4
COL4A3BP-203ENST00000380494 COX8CQ7Z4L0 72 aa12.58□□□□□ -0.4
COL4A3BP-203ENST00000380494 C1orf158Q8N1D5 194 aa12.58□□□□□ -0.4
COL4A3BP-203ENST00000380494 HIGD2AQ9BW72 106 aa12.58□□□□□ -0.4
COL4A3BP-203ENST00000380494 MRGPRG-AS1Q2M3A8 158 aa12.58□□□□□ -0.4
COL4A3BP-203ENST00000380494 Q6YL49 198 aa12.58□□□□□ -0.4
COL4A3BP-203ENST00000380494 ABCA1O95477 2261 aa12.58□□□□□ -0.4
COL4A3BP-203ENST00000380494 DYSFO75923 2080 aa12.57□□□□□ -0.4
COL4A3BP-203ENST00000380494 Q8IZM0 81 aa12.57□□□□□ -0.4
COL4A3BP-203ENST00000380494 J3QKU1 62 aa12.57□□□□□ -0.4
COL4A3BP-203ENST00000380494 CRIP2P52943 208 aaPredicted RBP12.57□□□□□ -0.4
COL4A3BP-203ENST00000380494 PPDPFQ9H3Y8 114 aa12.57□□□□□ -0.4
COL4A3BP-203ENST00000380494 LINC00959A0A1B0GUT2 108 aa12.56□□□□□ -0.4
COL4A3BP-203ENST00000380494 MED13Q9UHV7 2174 aa12.55□□□□□ -0.4
COL4A3BP-203ENST00000380494 NTM-AS1Q6ZSK4 140 aa12.55□□□□□ -0.4
COL4A3BP-203ENST00000380494 DCANP1Q8TF63 244 aa12.54□□□□□ -0.4
COL4A3BP-203ENST00000380494 TRBV7-7A0A0K0K1E9 115 aa12.53□□□□□ -0.4
COL4A3BP-203ENST00000380494 WISP2O76076 250 aa12.53□□□□□ -0.4
COL4A3BP-203ENST00000380494 XAGE1AQ9HD64 81 aa12.53□□□□□ -0.4
COL4A3BP-203ENST00000380494 CDC42SE2Q9NRR3 84 aa12.53□□□□□ -0.4
COL4A3BP-203ENST00000380494 DNAJC9-AS1A6NH13 148 aa12.53□□□□□ -0.4
COL4A3BP-203ENST00000380494 ZNF73O43830 326 aaPredicted RBP12.53□□□□□ -0.4
COL4A3BP-203ENST00000380494 PRO0628Q9UI54 55 aa12.53□□□□□ -0.4
COL4A3BP-203ENST00000380494 PKDREJQ9NTG1 2253 aa12.53□□□□□ -0.4
COL4A3BP-203ENST00000380494 Q8N814 137 aa12.53□□□□□ -0.4
COL4A3BP-203ENST00000380494 A0A096LNJ9 63 aa12.52□□□□□ -0.41
COL4A3BP-203ENST00000380494 SYCNQ0VAF6 134 aa12.52□□□□□ -0.41
COL4A3BP-203ENST00000380494 Q8NA96 180 aa12.52□□□□□ -0.41
COL4A3BP-203ENST00000380494 POLEQ07864 2286 aa12.52□□□□□ -0.41
COL4A3BP-203ENST00000380494 FAM30AQ9NZY2 134 aa12.51□□□□□ -0.41
COL4A3BP-203ENST00000380494 TSPEAR-AS2P59090 65 aa12.51□□□□□ -0.41
COL4A3BP-203ENST00000380494 DOCK7Q96N67 2140 aa12.51□□□□□ -0.41
COL4A3BP-203ENST00000380494 PRYO14603 147 aa12.51□□□□□ -0.41
COL4A3BP-203ENST00000380494 PRORYQ9H606 182 aa12.51□□□□□ -0.41
COL4A3BP-203ENST00000380494 CDIP1Q9H305 208 aa12.51□□□□□ -0.41
COL4A3BP-203ENST00000380494 LTBP2Q14767 1821 aa12.5□□□□□ -0.41
COL4A3BP-203ENST00000380494 KLK5Q9Y337 293 aaPredicted RBP12.5□□□□□ -0.41
COL4A3BP-203ENST00000380494 DOCK10Q96BY6 2186 aa12.5□□□□□ -0.41
COL4A3BP-203ENST00000380494 ATG2AQ2TAZ0 1938 aa12.5□□□□□ -0.41
COL4A3BP-203ENST00000380494 Q8N9L7 120 aa12.5□□□□□ -0.41
COL4A3BP-203ENST00000380494 GTF3C1Q12789 2109 aa12.49□□□□□ -0.41
COL4A3BP-203ENST00000380494 LINC00242Q5T6M2 205 aa12.49□□□□□ -0.41
COL4A3BP-203ENST00000380494 C11orf45Q8TAV5 145 aa12.49□□□□□ -0.41
COL4A3BP-203ENST00000380494 DOPEY2Q9Y3R5 2298 aa12.49□□□□□ -0.41
COL4A3BP-203ENST00000380494 IGLV2-18A0A075B6J9 118 aa12.48□□□□□ -0.41
COL4A3BP-203ENST00000380494 IGKV2-24A0A0C4DH68 120 aa12.48□□□□□ -0.41
COL4A3BP-203ENST00000380494 LOC107984640A0A0U1RRK4 108 aa12.48□□□□□ -0.41
COL4A3BP-203ENST00000380494 WFDC13Q8IUB5 93 aa12.48□□□□□ -0.41
COL4A3BP-203ENST00000380494 C22orf34Q6ZV56 151 aa12.48□□□□□ -0.41
COL4A3BP-203ENST00000380494 USF3Q68DE3 2245 aa12.48□□□□□ -0.41
COL4A3BP-203ENST00000380494 A0A087WVE0 104 aa12.48□□□□□ -0.41
COL4A3BP-203ENST00000380494 SMIM1B2RUZ4 78 aa12.48□□□□□ -0.41
COL4A3BP-203ENST00000380494 C11orf71Q6IPW1 123 aa12.47□□□□□ -0.41
COL4A3BP-203ENST00000380494 AMELXQ99217 191 aa12.47□□□□□ -0.41
COL4A3BP-203ENST00000380494 LINC01546A6NGU7 62 aa12.46□□□□□ -0.41
COL4A3BP-203ENST00000380494 IGLV1-40P01703 118 aa12.46□□□□□ -0.41
COL4A3BP-203ENST00000380494 TRIOBPQ9H2D6 2365 aa12.46□□□□□ -0.41
COL4A3BP-203ENST00000380494 A0A087WYN8 130 aa12.46□□□□□ -0.41
COL4A3BP-203ENST00000380494 CHCHD7Q9BUK0 85 aa12.45□□□□□ -0.42
COL4A3BP-203ENST00000380494 RETNQ9HD89 108 aa12.45□□□□□ -0.42
COL4A3BP-203ENST00000380494 PMAIP1Q13794 54 aa12.45□□□□□ -0.42
COL4A3BP-203ENST00000380494 LELP1Q5T871 98 aa12.45□□□□□ -0.42
COL4A3BP-203ENST00000380494 ROS1P08922 2347 aa12.45□□□□□ -0.42
COL4A3BP-203ENST00000380494 NCOA6Q14686 2063 aaPredicted RBP12.45□□□□□ -0.42
COL4A3BP-203ENST00000380494 SPTBN1Q01082 2364 aaKnown RBP12.44□□□□□ -0.42
COL4A3BP-203ENST00000380494 RPS28P62857 69 aaKnown RBP12.44□□□□□ -0.42
COL4A3BP-203ENST00000380494 ZNF706Q9Y5V0 76 aaPredicted RBP12.44□□□□□ -0.42
COL4A3BP-203ENST00000380494 WFDC10AQ9H1F0 79 aa12.44□□□□□ -0.42
COL4A3BP-203ENST00000380494 C2orf16Q68DN1 1984 aa12.43□□□□□ -0.42
COL4A3BP-203ENST00000380494 PRR4Q16378 134 aa12.43□□□□□ -0.42
COL4A3BP-203ENST00000380494 ADAMTSL4-AS1Q5T5F5 129 aa12.43□□□□□ -0.42
COL4A3BP-203ENST00000380494 BBC3Q96PG8 261 aaPredicted RBP12.43□□□□□ -0.42
COL4A3BP-203ENST00000380494 TRBV10-3A0A0K0K1G6 114 aa12.42□□□□□ -0.42
COL4A3BP-203ENST00000380494 IGKV2-28A0A075B6P5 120 aa12.42□□□□□ -0.42
COL4A3BP-203ENST00000380494 IGKV2D-28P01615 120 aa12.42□□□□□ -0.42
COL4A3BP-203ENST00000380494 SOSTDC1Q6X4U4 206 aa12.42□□□□□ -0.42
COL4A3BP-203ENST00000380494 MUC22E2RYF6 1773 aaPredicted RBP12.41□□□□□ -0.42
COL4A3BP-203ENST00000380494 IGHV4-31P0DP07 118 aa12.41□□□□□ -0.42
COL4A3BP-203ENST00000380494 A0A087WZ39 114 aa12.4□□□□□ -0.42
COL4A3BP-203ENST00000380494 LOC100131303A0A0U1RQF7 123 aa12.4□□□□□ -0.43
COL4A3BP-203ENST00000380494 Q6ZSV7 163 aa12.39□□□□□ -0.43
COL4A3BP-203ENST00000380494 Q8N3U1 123 aa12.39□□□□□ -0.43
COL4A3BP-203ENST00000380494 A0A0J9YWU9 116 aa12.39□□□□□ -0.43
COL4A3BP-203ENST00000380494 ZNF702PQ9H963 129 aa12.39□□□□□ -0.43
COL4A3BP-203ENST00000380494 A0A096LNI7 61 aa12.39□□□□□ -0.43
COL4A3BP-203ENST00000380494 DEFB131BA0A096LNP1 70 aa12.38□□□□□ -0.43
COL4A3BP-203ENST00000380494 COX6A2Q02221 97 aa12.38□□□□□ -0.43
COL4A3BP-203ENST00000380494 PLCE1Q9P212 2302 aa12.38□□□□□ -0.43
COL4A3BP-203ENST00000380494 CRYGAP11844 174 aa12.38□□□□□ -0.43
COL4A3BP-203ENST00000380494 CADP27708 2225 aa12.37□□□□□ -0.43
COL4A3BP-203ENST00000380494 KIAA1549Q9HCM3 1950 aa12.37□□□□□ -0.43
COL4A3BP-203ENST00000380494 CELA1Q9UNI1 258 aa12.37□□□□□ -0.43
COL4A3BP-203ENST00000380494 NCOR1O75376 2440 aa12.37□□□□□ -0.43
COL4A3BP-203ENST00000380494 PCNX3Q9H6A9 2034 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms