RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 SMIM27A0A1W2PRY6 76 aa15.84■□□□□ 0.13
TNFRSF4-201ENST00000379236 RPL37AP61513 92 aaKnown RBP15.84■□□□□ 0.13
TNFRSF4-201ENST00000379236 SMAGPQ0VAQ4 97 aa15.84■□□□□ 0.13
TNFRSF4-201ENST00000379236 HIGD2BQ4VC39 106 aa15.84■□□□□ 0.13
TNFRSF4-201ENST00000379236 KIR2DL4Q99706 377 aa15.84■□□□□ 0.13
TNFRSF4-201ENST00000379236 A0A1B0GW15 77 aa15.83■□□□□ 0.12
TNFRSF4-201ENST00000379236 PPP1R2P9O14990 202 aa15.83■□□□□ 0.12
TNFRSF4-201ENST00000379236 XCL1P47992 114 aa15.83■□□□□ 0.12
TNFRSF4-201ENST00000379236 SUMO2P61956 95 aaKnown RBP15.83■□□□□ 0.12
TNFRSF4-201ENST00000379236 SS18Q15532 418 aa15.82■□□□□ 0.12
TNFRSF4-201ENST00000379236 CCL25O15444 150 aa15.81■□□□□ 0.12
TNFRSF4-201ENST00000379236 S100A8P05109 93 aa15.81■□□□□ 0.12
TNFRSF4-201ENST00000379236 FAM104BQ5XKR9 115 aa15.81■□□□□ 0.12
TNFRSF4-201ENST00000379236 MRPL52Q86TS9 123 aaKnown RBP15.81■□□□□ 0.12
TNFRSF4-201ENST00000379236 LINC00959A0A1B0GUT2 108 aa15.8■□□□□ 0.12
TNFRSF4-201ENST00000379236 SLPIP03973 132 aa15.8■□□□□ 0.12
TNFRSF4-201ENST00000379236 MRPL51Q4U2R6 128 aaKnown RBP15.8■□□□□ 0.12
TNFRSF4-201ENST00000379236 NRACQ8N912 160 aa15.8■□□□□ 0.12
TNFRSF4-201ENST00000379236 LINC00862A6NCI5 91 aa15.79■□□□□ 0.12
TNFRSF4-201ENST00000379236 CKS2P33552 79 aa15.79■□□□□ 0.12
TNFRSF4-201ENST00000379236 FOXI1Q12951 378 aa15.79■□□□□ 0.12
TNFRSF4-201ENST00000379236 ZNF664Q8N3J9 261 aa15.79■□□□□ 0.12
TNFRSF4-201ENST00000379236 CDC42SE2Q9NRR3 84 aa15.79■□□□□ 0.12
TNFRSF4-201ENST00000379236 F8W036 122 aa15.78■□□□□ 0.12
TNFRSF4-201ENST00000379236 PANO1I0J062 215 aa15.78■□□□□ 0.12
TNFRSF4-201ENST00000379236 TMEM18Q96B42 140 aa15.78■□□□□ 0.12
TNFRSF4-201ENST00000379236 GVQW2A0A096LPI5 108 aaPredicted RBP15.77■□□□□ 0.12
TNFRSF4-201ENST00000379236 HBBP68871 147 aa15.77■□□□□ 0.12
TNFRSF4-201ENST00000379236 MRPL54Q6P161 138 aaKnown RBP15.77■□□□□ 0.12
TNFRSF4-201ENST00000379236 IGHV1-58A0A0C4DH39 117 aa15.76■□□□□ 0.11
TNFRSF4-201ENST00000379236 CHTF8P0CG12 524 aa15.76■□□□□ 0.11
TNFRSF4-201ENST00000379236 KRTAP29-1A8MX34 341 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF4-201ENST00000379236 KRTAP10-4P60372 401 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF4-201ENST00000379236 CIRBPQ14011 172 aaKnown RBP15.75■□□□□ 0.11
TNFRSF4-201ENST00000379236 C20orf78Q9BR46 151 aa15.75■□□□□ 0.11
TNFRSF4-201ENST00000379236 TCAPO15273 167 aa15.74■□□□□ 0.11
TNFRSF4-201ENST00000379236 RAB14P61106 215 aa15.74■□□□□ 0.11
TNFRSF4-201ENST00000379236 COX6A2Q02221 97 aa15.74■□□□□ 0.11
TNFRSF4-201ENST00000379236 CD164L2Q6UWJ8 174 aa15.73■□□□□ 0.11
TNFRSF4-201ENST00000379236 SPACA4Q8TDM5 124 aa15.73■□□□□ 0.11
TNFRSF4-201ENST00000379236 PKIGQ9Y2B9 76 aa15.73■□□□□ 0.11
TNFRSF4-201ENST00000379236 A0A087WYN8 130 aa15.72■□□□□ 0.11
TNFRSF4-201ENST00000379236 UBE2D4Q9Y2X8 147 aa15.72■□□□□ 0.11
TNFRSF4-201ENST00000379236 CSDC2Q9Y534 153 aaKnown RBP15.72■□□□□ 0.11
TNFRSF4-201ENST00000379236 C1orf196B1AJZ1 125 aa15.71■□□□□ 0.11
TNFRSF4-201ENST00000379236 D6R8Y8 96 aa15.71■□□□□ 0.11
TNFRSF4-201ENST00000379236 ZNF561-AS1K7EIQ3 104 aa15.71■□□□□ 0.11
TNFRSF4-201ENST00000379236 TNFRSF6BO95407 300 aa15.71■□□□□ 0.11
TNFRSF4-201ENST00000379236 MALP21145 153 aa15.71■□□□□ 0.11
TNFRSF4-201ENST00000379236 TRBV24-1A0A075B6N3 115 aa15.7■□□□□ 0.1
TNFRSF4-201ENST00000379236 IGKV2-24A0A0C4DH68 120 aa15.7■□□□□ 0.1
TNFRSF4-201ENST00000379236 MAJINQ3KP22 176 aa15.7■□□□□ 0.1
TNFRSF4-201ENST00000379236 RPL32P62910 135 aaKnown RBP15.69■□□□□ 0.1
TNFRSF4-201ENST00000379236 RNASE13Q5GAN3 156 aaKnown RBP15.69■□□□□ 0.1
TNFRSF4-201ENST00000379236 PKHD1L1Q86WI1 4243 aa15.69■□□□□ 0.1
TNFRSF4-201ENST00000379236 A0A1B0GXF2 115 aa15.68■□□□□ 0.1
TNFRSF4-201ENST00000379236 PPBPP02775 128 aa15.68■□□□□ 0.1
TNFRSF4-201ENST00000379236 ATP5L2Q7Z4Y8 100 aa15.68■□□□□ 0.1
TNFRSF4-201ENST00000379236 PRSS3P2Q8NHM4 247 aa15.68■□□□□ 0.1
TNFRSF4-201ENST00000379236 CARD19Q96LW7 228 aa15.68■□□□□ 0.1
TNFRSF4-201ENST00000379236 SMIM2Q9BVW6 85 aa15.68■□□□□ 0.1
TNFRSF4-201ENST00000379236 TRAV13-1A0A0B4J241 112 aa15.67■□□□□ 0.1
TNFRSF4-201ENST00000379236 COX7A2LO14548 114 aa15.67■□□□□ 0.1
TNFRSF4-201ENST00000379236 C7orf33Q8WU49 177 aa15.67■□□□□ 0.1
TNFRSF4-201ENST00000379236 TIMM21Q9BVV7 248 aa15.67■□□□□ 0.1
TNFRSF4-201ENST00000379236 OXTP01178 125 aa15.66■□□□□ 0.1
TNFRSF4-201ENST00000379236 PNRC1Q12796 327 aaPredicted RBP15.66■□□□□ 0.1
TNFRSF4-201ENST00000379236 Q6ZUT4 128 aa15.66■□□□□ 0.1
TNFRSF4-201ENST00000379236 LINC00526Q96FQ7 95 aa15.66■□□□□ 0.1
TNFRSF4-201ENST00000379236 PHOX2AO14813 284 aa15.65■□□□□ 0.1
TNFRSF4-201ENST00000379236 NPYP01303 97 aa15.65■□□□□ 0.1
TNFRSF4-201ENST00000379236 ORMDL3Q8N138 153 aa15.65■□□□□ 0.1
TNFRSF4-201ENST00000379236 PLAC8Q9NZF1 115 aa15.65■□□□□ 0.1
TNFRSF4-201ENST00000379236 LINC00474Q9P2X8 69 aa15.64■□□□□ 0.09
TNFRSF4-201ENST00000379236 MT-ND4LP03901 98 aa15.63■□□□□ 0.09
TNFRSF4-201ENST00000379236 SYCNQ0VAF6 134 aa15.63■□□□□ 0.09
TNFRSF4-201ENST00000379236 STPG4Q8N801 248 aa15.63■□□□□ 0.09
TNFRSF4-201ENST00000379236 ANAPC16Q96DE5 110 aa15.63■□□□□ 0.09
TNFRSF4-201ENST00000379236 A0A096LNI7 61 aa15.62■□□□□ 0.09
TNFRSF4-201ENST00000379236 APOMO95445 188 aa15.62■□□□□ 0.09
TNFRSF4-201ENST00000379236 RAB5AP20339 215 aa15.62■□□□□ 0.09
TNFRSF4-201ENST00000379236 RPL39P62891 51 aaKnown RBP15.62■□□□□ 0.09
TNFRSF4-201ENST00000379236 TMEM136Q6ZRR5 245 aa15.62■□□□□ 0.09
TNFRSF4-201ENST00000379236 PRELID3AQ96N28 172 aa15.61■□□□□ 0.09
TNFRSF4-201ENST00000379236 SPANXA1Q9NS26 97 aa15.61■□□□□ 0.09
TNFRSF4-201ENST00000379236 FAT3Q8TDW7 4589 aa15.61■□□□□ 0.09
TNFRSF4-201ENST00000379236 LRP1Q07954 4544 aaKnown RBP15.6■□□□□ 0.09
TNFRSF4-201ENST00000379236 HNRNPA3P51991 378 aaKnown RBP15.6■□□□□ 0.09
TNFRSF4-201ENST00000379236 IGLV4-69A0A075B6H9 119 aa15.59■□□□□ 0.09
TNFRSF4-201ENST00000379236 C5orf38Q86SI9 138 aa15.59■□□□□ 0.09
TNFRSF4-201ENST00000379236 CAMK2N2Q96S95 79 aa15.58■□□□□ 0.08
TNFRSF4-201ENST00000379236 IFI27P40305 119 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF4-201ENST00000379236 LOC107984640A0A0U1RRK4 108 aa15.55■□□□□ 0.08
TNFRSF4-201ENST00000379236 IFITM10A6NMD0 228 aa15.55■□□□□ 0.08
TNFRSF4-201ENST00000379236 MRPS36P82909 103 aaKnown RBP15.55■□□□□ 0.08
TNFRSF4-201ENST00000379236 MAP1LC3AQ9H492 121 aa15.55■□□□□ 0.08
TNFRSF4-201ENST00000379236 LAMTOR2Q9Y2Q5 125 aa15.55■□□□□ 0.08
TNFRSF4-201ENST00000379236 LOC389332A0A1B0GUA5 103 aa15.54■□□□□ 0.08
TNFRSF4-201ENST00000379236 SPAG11BQ08648 103 aa15.54■□□□□ 0.08
TNFRSF4-201ENST00000379236 Q6ZRU5 148 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms