RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.47□□□□□ -0.73
MSH5-201ENST00000375703 NTN5Q8WTR8 489 aaPredicted RBP10.47□□□□□ -0.73
MSH5-201ENST00000375703 CACNA1AO00555 2505 aa10.46□□□□□ -0.73
MSH5-201ENST00000375703 TIMM17BO60830 172 aa10.46□□□□□ -0.73
MSH5-201ENST00000375703 IGLV5-45A0A087WSX0 123 aa10.46□□□□□ -0.74
MSH5-201ENST00000375703 TRBV10-2A0A0K0K1G8 114 aa10.46□□□□□ -0.74
MSH5-201ENST00000375703 LRRC75A-AS1Q8N1F1 130 aa10.46□□□□□ -0.74
MSH5-201ENST00000375703 NDUFA1O15239 70 aa10.45□□□□□ -0.74
MSH5-201ENST00000375703 IFITM1P13164 125 aa10.45□□□□□ -0.74
MSH5-201ENST00000375703 C11orf44Q8N8P7 122 aa10.45□□□□□ -0.74
MSH5-201ENST00000375703 DAND5Q8N907 189 aa10.45□□□□□ -0.74
MSH5-201ENST00000375703 FAM208BQ5VWN6 2430 aa10.45□□□□□ -0.74
MSH5-201ENST00000375703 TRAV25A0A0B4J276 109 aa10.45□□□□□ -0.74
MSH5-201ENST00000375703 CIRBPQ14011 172 aaKnown RBP10.45□□□□□ -0.74
MSH5-201ENST00000375703 A0A1W2PRX2 142 aa10.44□□□□□ -0.74
MSH5-201ENST00000375703 HERVK_113P63121 156 aa10.44□□□□□ -0.74
MSH5-201ENST00000375703 TEX15Q9BXT5 2789 aa10.44□□□□□ -0.74
MSH5-201ENST00000375703 RPL36AP83881 106 aaKnown RBP10.44□□□□□ -0.74
MSH5-201ENST00000375703 RPL36ALQ969Q0 106 aaKnown RBP10.44□□□□□ -0.74
MSH5-201ENST00000375703 BBC3Q96PG8 261 aaPredicted RBP10.44□□□□□ -0.74
MSH5-201ENST00000375703 LINC00694P0DN24 101 aa10.43□□□□□ -0.74
MSH5-201ENST00000375703 LINC00242Q5T6M2 205 aa10.43□□□□□ -0.74
MSH5-201ENST00000375703 LINC01600Q96MT4 127 aa10.43□□□□□ -0.74
MSH5-201ENST00000375703 B5MCH6 92 aa10.43□□□□□ -0.74
MSH5-201ENST00000375703 TMEM86BQ8N661 226 aa10.43□□□□□ -0.74
MSH5-201ENST00000375703 CENPEQ02224 2701 aa10.43□□□□□ -0.74
MSH5-201ENST00000375703 TEX49A0A1B0GTD5 131 aa10.42□□□□□ -0.74
MSH5-201ENST00000375703 Q6ZTI0 123 aa10.42□□□□□ -0.74
MSH5-201ENST00000375703 IL17DQ8TAD2 202 aa10.42□□□□□ -0.74
MSH5-201ENST00000375703 Q9H8V8 135 aa10.42□□□□□ -0.74
MSH5-201ENST00000375703 CCL24O00175 119 aa10.42□□□□□ -0.74
MSH5-201ENST00000375703 NDUFA7O95182 113 aa10.42□□□□□ -0.74
MSH5-201ENST00000375703 RPL13AP40429 203 aaKnown RBP10.42□□□□□ -0.74
MSH5-201ENST00000375703 C2orf82Q6UX34 121 aa10.42□□□□□ -0.74
MSH5-201ENST00000375703 IGLV5-39A0A0G2JS06 123 aa10.42□□□□□ -0.74
MSH5-201ENST00000375703 TRBV10-1A0A0K0K1A3 114 aa10.42□□□□□ -0.74
MSH5-201ENST00000375703 H7C423 109 aa10.42□□□□□ -0.74
MSH5-201ENST00000375703 K7EQD1 137 aa10.42□□□□□ -0.74
MSH5-201ENST00000375703 NTM-AS1Q6ZSK4 140 aa10.42□□□□□ -0.74
MSH5-201ENST00000375703 CLEC2BQ92478 149 aa10.42□□□□□ -0.74
MSH5-201ENST00000375703 ZNF625Q96I27 306 aaPredicted RBP10.42□□□□□ -0.74
MSH5-201ENST00000375703 TRAV13-1A0A0B4J241 112 aa10.41□□□□□ -0.74
MSH5-201ENST00000375703 SMIM20Q8N5G0 67 aa10.41□□□□□ -0.74
MSH5-201ENST00000375703 DAZ2Q13117 558 aaKnown RBP10.41□□□□□ -0.74
MSH5-201ENST00000375703 DAZ4Q86SG3 579 aaKnown RBP10.41□□□□□ -0.74
MSH5-201ENST00000375703 DAZ3Q9NR90 486 aaKnown RBP10.41□□□□□ -0.74
MSH5-201ENST00000375703 CSDC2Q9Y534 153 aaKnown RBP10.41□□□□□ -0.74
MSH5-201ENST00000375703 A0A0U1RRA0 63 aa10.4□□□□□ -0.75
MSH5-201ENST00000375703 GAGE12JA6NER3 117 aa10.4□□□□□ -0.75
MSH5-201ENST00000375703 DNAJC9-AS1A6NH13 148 aa10.4□□□□□ -0.75
MSH5-201ENST00000375703 GAGE4Q13068 117 aa10.4□□□□□ -0.75
MSH5-201ENST00000375703 GAGE5Q13069 117 aa10.4□□□□□ -0.75
MSH5-201ENST00000375703 FAM19A3Q7Z5A8 133 aa10.4□□□□□ -0.75
MSH5-201ENST00000375703 ZNF843Q8N446 348 aa10.4□□□□□ -0.75
MSH5-201ENST00000375703 LINC00308Q8TCZ7 52 aa10.4□□□□□ -0.75
MSH5-201ENST00000375703 PTPN13Q12923 2485 aa10.4□□□□□ -0.75
MSH5-201ENST00000375703 NAV2Q8IVL1 2488 aa10.39□□□□□ -0.75
MSH5-201ENST00000375703 ZNF462Q96JM2 2506 aa10.39□□□□□ -0.75
MSH5-201ENST00000375703 TRAV4A0A0B4J268 109 aa10.39□□□□□ -0.75
MSH5-201ENST00000375703 KRTAP1-3Q8IUG1 177 aa10.39□□□□□ -0.75
MSH5-201ENST00000375703 UBE2WQ96B02 151 aa10.39□□□□□ -0.75
MSH5-201ENST00000375703 CITED2Q99967 270 aaPredicted RBP10.39□□□□□ -0.75
MSH5-201ENST00000375703 LST1O00453 97 aa10.39□□□□□ -0.75
MSH5-201ENST00000375703 NOP10Q9NPE3 64 aaKnown RBP10.39□□□□□ -0.75
MSH5-201ENST00000375703 SMIM1B2RUZ4 78 aa10.38□□□□□ -0.75
MSH5-201ENST00000375703 CDC42SE2Q9NRR3 84 aa10.38□□□□□ -0.75
MSH5-201ENST00000375703 H3BT86 120 aa10.38□□□□□ -0.75
MSH5-201ENST00000375703 ANAPC13Q9BS18 74 aa10.38□□□□□ -0.75
MSH5-201ENST00000375703 MYO9AB2RTY4 2548 aa10.38□□□□□ -0.75
MSH5-201ENST00000375703 TRAV8-4A0A0B4J246 113 aa10.37□□□□□ -0.75
MSH5-201ENST00000375703 LRRK2Q5S007 2527 aa10.37□□□□□ -0.75
MSH5-201ENST00000375703 GAGE6Q13070 117 aa10.37□□□□□ -0.75
MSH5-201ENST00000375703 TEX29Q8N6K0 151 aa10.37□□□□□ -0.75
MSH5-201ENST00000375703 PRIMA1Q86XR5 153 aa10.36□□□□□ -0.75
MSH5-201ENST00000375703 UBE2L6O14933 153 aa10.35□□□□□ -0.75
MSH5-201ENST00000375703 MEIG1Q5JSS6 88 aa10.35□□□□□ -0.75
MSH5-201ENST00000375703 COPS9Q8WXC6 57 aa10.35□□□□□ -0.75
MSH5-201ENST00000375703 CITED1Q99966 193 aa10.35□□□□□ -0.75
MSH5-201ENST00000375703 ESM1Q9NQ30 184 aa10.35□□□□□ -0.75
MSH5-201ENST00000375703 SNCGO76070 127 aa10.35□□□□□ -0.75
MSH5-201ENST00000375703 FAM110AQ9BQ89 295 aa10.35□□□□□ -0.75
MSH5-201ENST00000375703 ABCA12Q86UK0 2595 aa10.35□□□□□ -0.75
MSH5-201ENST00000375703 CHD6Q8TD26 2715 aa10.35□□□□□ -0.75
MSH5-201ENST00000375703 TRGV2A0A075B6R0 118 aa10.34□□□□□ -0.75
MSH5-201ENST00000375703 F5H768 121 aa10.34□□□□□ -0.75
MSH5-201ENST00000375703 GIG44P09565 113 aaPredicted RBP10.34□□□□□ -0.75
MSH5-201ENST00000375703 CMC4P56277 68 aaPredicted RBP10.34□□□□□ -0.75
MSH5-201ENST00000375703 SOSTDC1Q6X4U4 206 aa10.34□□□□□ -0.75
MSH5-201ENST00000375703 WFDC11Q8NEX6 87 aa10.34□□□□□ -0.75
MSH5-201ENST00000375703 TMEM243Q9BU79 118 aa10.34□□□□□ -0.75
MSH5-201ENST00000375703 GAGE7O76087 117 aa10.34□□□□□ -0.75
MSH5-201ENST00000375703 GAGE12FP0CL80 117 aa10.34□□□□□ -0.75
MSH5-201ENST00000375703 GAGE12GP0CL81 117 aa10.34□□□□□ -0.75
MSH5-201ENST00000375703 GAGE12IP0CL82 117 aa10.34□□□□□ -0.75
MSH5-201ENST00000375703 ZFYVE26Q68DK2 2539 aa10.33□□□□□ -0.76
MSH5-201ENST00000375703 CRLF1O75462 422 aa10.33□□□□□ -0.76
MSH5-201ENST00000375703 GAGE2BQ13066 116 aa10.33□□□□□ -0.76
MSH5-201ENST00000375703 GAGE2EQ4V326 116 aa10.33□□□□□ -0.76
MSH5-201ENST00000375703 C16orf74Q96GX8 76 aa10.33□□□□□ -0.76
MSH5-201ENST00000375703 GAGE2DQ9UEU5 116 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms