RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 PSMG3-AS1Q96PY0 264 aa12.67□□□□□ -0.38
MCF2L-203ENST00000375604 KPRPQ5T749 579 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-203ENST00000375604 UPK3BQ9BT76 320 aa12.67□□□□□ -0.38
MCF2L-203ENST00000375604 ZNF22P17026 224 aaPredicted RBP12.66□□□□□ -0.38
MCF2L-203ENST00000375604 JMJD7-PLA2G4BH0Y9G9 81 aa12.66□□□□□ -0.38
MCF2L-203ENST00000375604 SPINK6Q6UWN8 80 aa12.66□□□□□ -0.38
MCF2L-203ENST00000375604 SMIM9A6NGZ8 99 aa12.66□□□□□ -0.38
MCF2L-203ENST00000375604 ODF3Q96PU9 254 aa12.66□□□□□ -0.38
MCF2L-203ENST00000375604 MLST8Q9BVC4 326 aa12.65□□□□□ -0.38
MCF2L-203ENST00000375604 C3orf84H3BNL1 204 aa12.65□□□□□ -0.38
MCF2L-203ENST00000375604 MIFP14174 115 aa12.65□□□□□ -0.38
MCF2L-203ENST00000375604 MBD6Q96DN6 1003 aa12.65□□□□□ -0.38
MCF2L-203ENST00000375604 PTPRQQ9UMZ3 2332 aa12.65□□□□□ -0.38
MCF2L-203ENST00000375604 C11orf21Q9P2W6 132 aa12.65□□□□□ -0.38
MCF2L-203ENST00000375604 MUC22E2RYF6 1773 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-203ENST00000375604 BRI3O95415 125 aa12.64□□□□□ -0.39
MCF2L-203ENST00000375604 TNCP24821 2201 aa12.63□□□□□ -0.39
MCF2L-203ENST00000375604 IGLV2-11P01706 119 aa12.63□□□□□ -0.39
MCF2L-203ENST00000375604 EBI3Q14213 229 aa12.63□□□□□ -0.39
MCF2L-203ENST00000375604 C1orf158Q8N1D5 194 aa12.63□□□□□ -0.39
MCF2L-203ENST00000375604 IGLV9-49A0A0B4J1Y8 123 aa12.63□□□□□ -0.39
MCF2L-203ENST00000375604 TRAV10A0A0B4J240 114 aa12.62□□□□□ -0.39
MCF2L-203ENST00000375604 RNASE3P12724 160 aaKnown RBP12.62□□□□□ -0.39
MCF2L-203ENST00000375604 SPANXCQ9NY87 97 aa12.62□□□□□ -0.39
MCF2L-203ENST00000375604 FAM208BQ5VWN6 2430 aa12.62□□□□□ -0.39
MCF2L-203ENST00000375604 C9orf85Q96MD7 179 aa12.62□□□□□ -0.39
MCF2L-203ENST00000375604 BPY2O14599 106 aa12.62□□□□□ -0.39
MCF2L-203ENST00000375604 NDUFA7O95182 113 aa12.61□□□□□ -0.39
MCF2L-203ENST00000375604 LINC00308Q8TCZ7 52 aa12.61□□□□□ -0.39
MCF2L-203ENST00000375604 TSHBP01222 138 aa12.6□□□□□ -0.39
MCF2L-203ENST00000375604 ENHOQ6UWT2 76 aa12.6□□□□□ -0.39
MCF2L-203ENST00000375604 ATOX1O00244 68 aa12.6□□□□□ -0.39
MCF2L-203ENST00000375604 RBX1P62877 108 aa12.6□□□□□ -0.39
MCF2L-203ENST00000375604 SYCNQ0VAF6 134 aa12.6□□□□□ -0.39
MCF2L-203ENST00000375604 RAI1Q7Z5J4 1906 aaPredicted RBP12.6□□□□□ -0.39
MCF2L-203ENST00000375604 IGHV4-30-4P0DP06 118 aa12.6□□□□□ -0.39
MCF2L-203ENST00000375604 Q8N6K4 173 aa12.59□□□□□ -0.39
MCF2L-203ENST00000375604 C6orf99Q4VX62 202 aa12.58□□□□□ -0.4
MCF2L-203ENST00000375604 TRIAP1O43715 76 aa12.58□□□□□ -0.4
MCF2L-203ENST00000375604 UBE2D1P51668 147 aa12.58□□□□□ -0.4
MCF2L-203ENST00000375604 TRBV6-4A0A1B0GX49 114 aa12.58□□□□□ -0.4
MCF2L-203ENST00000375604 SMIM20Q8N5G0 67 aa12.58□□□□□ -0.4
MCF2L-203ENST00000375604 MPLKIPQ8TAP9 179 aa12.57□□□□□ -0.4
MCF2L-203ENST00000375604 G3V4G9 280 aa12.57□□□□□ -0.4
MCF2L-203ENST00000375604 H3BQ85 93 aa12.57□□□□□ -0.4
MCF2L-203ENST00000375604 CRIP2P52943 208 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-203ENST00000375604 OTOGLQ3ZCN5 2332 aa12.56□□□□□ -0.4
MCF2L-203ENST00000375604 PTPRSQ13332 1948 aa12.56□□□□□ -0.4
MCF2L-203ENST00000375604 CASC2Q6XLA1 102 aa12.56□□□□□ -0.4
MCF2L-203ENST00000375604 H7C423 109 aa12.55□□□□□ -0.4
MCF2L-203ENST00000375604 IGLV1-40P01703 118 aa12.55□□□□□ -0.4
MCF2L-203ENST00000375604 SVIPQ8NHG7 77 aa12.55□□□□□ -0.4
MCF2L-203ENST00000375604 C7orf33Q8WU49 177 aa12.55□□□□□ -0.4
MCF2L-203ENST00000375604 LINC00959A0A1B0GUT2 108 aa12.55□□□□□ -0.4
MCF2L-203ENST00000375604 SPANXDQ9BXN6 97 aa12.54□□□□□ -0.4
MCF2L-203ENST00000375604 UBE2D4Q9Y2X8 147 aa12.54□□□□□ -0.4
MCF2L-203ENST00000375604 ARHGAP32A7KAX9 2087 aa12.54□□□□□ -0.4
MCF2L-203ENST00000375604 H3BT86 120 aa12.54□□□□□ -0.4
MCF2L-203ENST00000375604 NRACQ8N912 160 aa12.54□□□□□ -0.4
MCF2L-203ENST00000375604 MT-ATP8P03928 68 aa12.53□□□□□ -0.4
MCF2L-203ENST00000375604 SEC61GP60059 68 aa12.53□□□□□ -0.4
MCF2L-203ENST00000375604 TRBV6-5A0A0K0K1A5 114 aa12.53□□□□□ -0.4
MCF2L-203ENST00000375604 C9orf116Q5BN46 136 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-203ENST00000375604 COL5A1P20908 1838 aaPredicted RBP12.52□□□□□ -0.4
MCF2L-203ENST00000375604 U3KQK5 164 aa12.52□□□□□ -0.4
MCF2L-203ENST00000375604 PRR14LQ5THK1 2151 aa12.52□□□□□ -0.41
MCF2L-203ENST00000375604 IGLV4-69A0A075B6H9 119 aa12.51□□□□□ -0.41
MCF2L-203ENST00000375604 IBA57-AS1B1ANH7 110 aa12.51□□□□□ -0.41
MCF2L-203ENST00000375604 CCKP06307 115 aa12.5□□□□□ -0.41
MCF2L-203ENST00000375604 SPANXB1Q9NS25 103 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-203ENST00000375604 A0A1W2PPR1 153 aa12.5□□□□□ -0.41
MCF2L-203ENST00000375604 FSTL3O95633 263 aa12.5□□□□□ -0.41
MCF2L-203ENST00000375604 HIVEP2P31629 2446 aa12.5□□□□□ -0.41
MCF2L-203ENST00000375604 PLAC8L1A1L4L8 177 aa12.49□□□□□ -0.41
MCF2L-203ENST00000375604 WFDC13Q8IUB5 93 aa12.49□□□□□ -0.41
MCF2L-203ENST00000375604 LELP1Q5T871 98 aa12.48□□□□□ -0.41
MCF2L-203ENST00000375604 CD164L2Q6UWJ8 174 aa12.48□□□□□ -0.41
MCF2L-203ENST00000375604 RETNLBQ9BQ08 111 aa12.47□□□□□ -0.41
MCF2L-203ENST00000375604 UBE2D3P61077 147 aa12.47□□□□□ -0.41
MCF2L-203ENST00000375604 SMIM11BQ8TCY0 68 aa12.47□□□□□ -0.41
MCF2L-203ENST00000375604 BDP1A6H8Y1 2624 aa12.47□□□□□ -0.41
MCF2L-203ENST00000375604 PRR3P79522 188 aaKnown RBP12.47□□□□□ -0.41
MCF2L-203ENST00000375604 C20orf197Q8N268 126 aa12.46□□□□□ -0.41
MCF2L-203ENST00000375604 ATG2AQ2TAZ0 1938 aa12.46□□□□□ -0.41
MCF2L-203ENST00000375604 HCFC1P51610 2035 aa12.46□□□□□ -0.41
MCF2L-203ENST00000375604 KLLNB2CW77 178 aa12.46□□□□□ -0.41
MCF2L-203ENST00000375604 COX6A2Q02221 97 aa12.46□□□□□ -0.41
MCF2L-203ENST00000375604 SPTSSBQ8NFR3 76 aa12.46□□□□□ -0.41
MCF2L-203ENST00000375604 LRP4O75096 1905 aa12.46□□□□□ -0.41
MCF2L-203ENST00000375604 TRBV27A0A0K0K1C4 114 aa12.46□□□□□ -0.42
MCF2L-203ENST00000375604 PRR4Q16378 134 aa12.46□□□□□ -0.42
MCF2L-203ENST00000375604 Q6ZQY7 126 aa12.46□□□□□ -0.42
MCF2L-203ENST00000375604 POM121L12Q8N7R1 296 aa12.45□□□□□ -0.42
MCF2L-203ENST00000375604 BRK1Q8WUW1 75 aa12.45□□□□□ -0.42
MCF2L-203ENST00000375604 USP17L23D6RBM5 183 aa12.45□□□□□ -0.42
MCF2L-203ENST00000375604 SNURFQ9Y675 71 aa12.45□□□□□ -0.42
MCF2L-203ENST00000375604 MRPS12O15235 138 aaKnown RBP12.44□□□□□ -0.42
MCF2L-203ENST00000375604 NDUFV3P56181 108 aaKnown RBP12.44□□□□□ -0.42
MCF2L-203ENST00000375604 EXPH5Q8NEV8 1989 aa12.44□□□□□ -0.42
MCF2L-203ENST00000375604 ODF3L2Q3SX64 289 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms