RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 BEAN1Q3B7T3 259 aa11.2□□□□□ -0.62
TMEM50A-201ENST00000374358 VSIG2Q96IQ7 327 aa11.2□□□□□ -0.62
TMEM50A-201ENST00000374358 CARD19Q96LW7 228 aa11.2□□□□□ -0.62
TMEM50A-201ENST00000374358 CITED2Q99967 270 aaPredicted RBP11.2□□□□□ -0.62
TMEM50A-201ENST00000374358 RS1O15537 224 aa11.19□□□□□ -0.62
TMEM50A-201ENST00000374358 LRRC75A-AS1Q8N1F1 130 aa11.19□□□□□ -0.62
TMEM50A-201ENST00000374358 SPATA25Q9BR10 227 aa11.19□□□□□ -0.62
TMEM50A-201ENST00000374358 SPANXA1Q9NS26 97 aa11.19□□□□□ -0.62
TMEM50A-201ENST00000374358 CCL24O00175 119 aa11.19□□□□□ -0.62
TMEM50A-201ENST00000374358 COX6A2Q02221 97 aa11.19□□□□□ -0.62
TMEM50A-201ENST00000374358 ERG28Q9UKR5 140 aa11.19□□□□□ -0.62
TMEM50A-201ENST00000374358 TINCRA0A1B0GVN0 87 aa11.18□□□□□ -0.62
TMEM50A-201ENST00000374358 GEMIN7Q9H840 131 aaKnown RBP11.18□□□□□ -0.62
TMEM50A-201ENST00000374358 ANK3Q12955 4377 aaKnown RBP11.18□□□□□ -0.62
TMEM50A-201ENST00000374358 LYRM7Q5U5X0 104 aa11.17□□□□□ -0.62
TMEM50A-201ENST00000374358 ANKRD29Q8N6D5 301 aa11.17□□□□□ -0.62
TMEM50A-201ENST00000374358 C9JAW5 83 aa11.17□□□□□ -0.62
TMEM50A-201ENST00000374358 GCN1Q92616 2671 aaKnown RBP11.17□□□□□ -0.62
TMEM50A-201ENST00000374358 TRBV20-1A0A075B6N2 111 aa11.16□□□□□ -0.62
TMEM50A-201ENST00000374358 A0A0B4J2C4 111 aa11.16□□□□□ -0.62
TMEM50A-201ENST00000374358 PIK3CD-AS1Q5SR53 167 aa11.16□□□□□ -0.62
TMEM50A-201ENST00000374358 DGAT2L7PQ6IED9 249 aa11.16□□□□□ -0.62
TMEM50A-201ENST00000374358 HELZ2Q9BYK8 2649 aaKnown RBP11.16□□□□□ -0.62
TMEM50A-201ENST00000374358 NBEAL2Q6ZNJ1 2754 aa11.16□□□□□ -0.62
TMEM50A-201ENST00000374358 A0A0U1RRA0 63 aa11.16□□□□□ -0.62
TMEM50A-201ENST00000374358 PLA2G2AP14555 144 aa11.16□□□□□ -0.62
TMEM50A-201ENST00000374358 TEN1Q86WV5 123 aa11.16□□□□□ -0.62
TMEM50A-201ENST00000374358 ZNF625Q96I27 306 aaPredicted RBP11.16□□□□□ -0.62
TMEM50A-201ENST00000374358 CDIP1Q9H305 208 aa11.15□□□□□ -0.62
TMEM50A-201ENST00000374358 NOP10Q9NPE3 64 aaKnown RBP11.15□□□□□ -0.62
TMEM50A-201ENST00000374358 TRIAP1O43715 76 aa11.14□□□□□ -0.63
TMEM50A-201ENST00000374358 CRYBA4P53673 196 aa11.14□□□□□ -0.63
TMEM50A-201ENST00000374358 NTM-AS1Q6ZSK4 140 aa11.14□□□□□ -0.63
TMEM50A-201ENST00000374358 GAGE12JA6NER3 117 aa11.14□□□□□ -0.63
TMEM50A-201ENST00000374358 SLC25A20O43772 301 aa11.14□□□□□ -0.63
TMEM50A-201ENST00000374358 GAGE4Q13068 117 aa11.14□□□□□ -0.63
TMEM50A-201ENST00000374358 GAGE5Q13069 117 aa11.14□□□□□ -0.63
TMEM50A-201ENST00000374358 ATP6V0E2Q8NHE4 81 aa11.14□□□□□ -0.63
TMEM50A-201ENST00000374358 SVIPQ8NHG7 77 aa11.14□□□□□ -0.63
TMEM50A-201ENST00000374358 IL17DQ8TAD2 202 aa11.14□□□□□ -0.63
TMEM50A-201ENST00000374358 TMEM101Q96IK0 257 aa11.14□□□□□ -0.63
TMEM50A-201ENST00000374358 DNAJC30Q96LL9 226 aa11.14□□□□□ -0.63
TMEM50A-201ENST00000374358 CLUHP3Q96NS8 147 aa11.14□□□□□ -0.63
TMEM50A-201ENST00000374358 TRAV13-1A0A0B4J241 112 aa11.13□□□□□ -0.63
TMEM50A-201ENST00000374358 RPL35AP18077 110 aaKnown RBP11.13□□□□□ -0.63
TMEM50A-201ENST00000374358 GIG44P09565 113 aaPredicted RBP11.13□□□□□ -0.63
TMEM50A-201ENST00000374358 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.12□□□□□ -0.63
TMEM50A-201ENST00000374358 MIAQ16674 131 aa11.12□□□□□ -0.63
TMEM50A-201ENST00000374358 ZFAND6Q6FIF0 208 aa11.12□□□□□ -0.63
TMEM50A-201ENST00000374358 SBSPONQ8IVN8 264 aa11.12□□□□□ -0.63
TMEM50A-201ENST00000374358 VWFP04275 2813 aa11.12□□□□□ -0.63
TMEM50A-201ENST00000374358 LOC100131303A0A0U1RQF7 123 aa11.12□□□□□ -0.63
TMEM50A-201ENST00000374358 LINC00242Q5T6M2 205 aa11.12□□□□□ -0.63
TMEM50A-201ENST00000374358 PPDPFLQ8WWR9 84 aa11.12□□□□□ -0.63
TMEM50A-201ENST00000374358 FASNP49327 2511 aaKnown RBP11.12□□□□□ -0.63
TMEM50A-201ENST00000374358 TMEM86BQ8N661 226 aa11.12□□□□□ -0.63
TMEM50A-201ENST00000374358 K7EQD1 137 aa11.11□□□□□ -0.63
TMEM50A-201ENST00000374358 LINC01006Q8NI28 216 aa11.11□□□□□ -0.63
TMEM50A-201ENST00000374358 SPANXDQ9BXN6 97 aa11.11□□□□□ -0.63
TMEM50A-201ENST00000374358 SPANXCQ9NY87 97 aa11.11□□□□□ -0.63
TMEM50A-201ENST00000374358 UNC79Q9P2D8 2635 aa11.11□□□□□ -0.63
TMEM50A-201ENST00000374358 MT-ATP8P03928 68 aa11.1□□□□□ -0.63
TMEM50A-201ENST00000374358 GAGE7O76087 117 aa11.1□□□□□ -0.63
TMEM50A-201ENST00000374358 GAGE12FP0CL80 117 aa11.1□□□□□ -0.63
TMEM50A-201ENST00000374358 GAGE12GP0CL81 117 aa11.1□□□□□ -0.63
TMEM50A-201ENST00000374358 GAGE12IP0CL82 117 aa11.1□□□□□ -0.63
TMEM50A-201ENST00000374358 XGP55808 180 aa11.1□□□□□ -0.63
TMEM50A-201ENST00000374358 Q9H8V8 135 aa11.1□□□□□ -0.63
TMEM50A-201ENST00000374358 TRAV25A0A0B4J276 109 aa11.09□□□□□ -0.63
TMEM50A-201ENST00000374358 RPL36AP83881 106 aaKnown RBP11.09□□□□□ -0.63
TMEM50A-201ENST00000374358 KRTAP1-1Q07627 177 aa11.09□□□□□ -0.63
TMEM50A-201ENST00000374358 CLEC2BQ92478 149 aa11.09□□□□□ -0.63
TMEM50A-201ENST00000374358 RPL36ALQ969Q0 106 aaKnown RBP11.09□□□□□ -0.63
TMEM50A-201ENST00000374358 NOTCH2Q04721 2471 aa11.09□□□□□ -0.63
TMEM50A-201ENST00000374358 ICOSQ9Y6W8 199 aa11.09□□□□□ -0.63
TMEM50A-201ENST00000374358 IGLV5-45A0A087WSX0 123 aa11.08□□□□□ -0.64
TMEM50A-201ENST00000374358 LINC01620Q4KN68 170 aa11.08□□□□□ -0.64
TMEM50A-201ENST00000374358 PLAC8L1A1L4L8 177 aa11.08□□□□□ -0.64
TMEM50A-201ENST00000374358 YAE1D1Q9NRH1 226 aa11.08□□□□□ -0.64
TMEM50A-201ENST00000374358 NTN5Q8WTR8 489 aaPredicted RBP11.07□□□□□ -0.64
TMEM50A-201ENST00000374358 HIVEP2P31629 2446 aa11.07□□□□□ -0.64
TMEM50A-201ENST00000374358 TIRAPP58753 221 aa11.07□□□□□ -0.64
TMEM50A-201ENST00000374358 TRGV2A0A075B6R0 118 aa11.06□□□□□ -0.64
TMEM50A-201ENST00000374358 SMIM1B2RUZ4 78 aa11.06□□□□□ -0.64
TMEM50A-201ENST00000374358 NDUFA1O15239 70 aa11.06□□□□□ -0.64
TMEM50A-201ENST00000374358 RPL13AP40429 203 aaKnown RBP11.06□□□□□ -0.64
TMEM50A-201ENST00000374358 ATXN8Q156A1 80 aa11.06□□□□□ -0.64
TMEM50A-201ENST00000374358 TRAV4A0A0B4J268 109 aa11.06□□□□□ -0.64
TMEM50A-201ENST00000374358 IGKV3OR2-268A0A0C4DH90 116 aa11.06□□□□□ -0.64
TMEM50A-201ENST00000374358 TRBV30A0A0K0K1B3 111 aa11.06□□□□□ -0.64
TMEM50A-201ENST00000374358 TEX49A0A1B0GTD5 131 aa11.05□□□□□ -0.64
TMEM50A-201ENST00000374358 HERVK_113P63121 156 aa11.05□□□□□ -0.64
TMEM50A-201ENST00000374358 IGLV5-39A0A0G2JS06 123 aa11.04□□□□□ -0.64
TMEM50A-201ENST00000374358 CDC42SE2Q9NRR3 84 aa11.04□□□□□ -0.64
TMEM50A-201ENST00000374358 C19orf73Q9NVV2 129 aa11.04□□□□□ -0.64
TMEM50A-201ENST00000374358 SOSTDC1Q6X4U4 206 aa11.04□□□□□ -0.64
TMEM50A-201ENST00000374358 HECTD1Q9ULT8 2610 aa11.04□□□□□ -0.64
TMEM50A-201ENST00000374358 DAZ2Q13117 558 aaKnown RBP11.03□□□□□ -0.64
TMEM50A-201ENST00000374358 DAZ4Q86SG3 579 aaKnown RBP11.03□□□□□ -0.64
TMEM50A-201ENST00000374358 DAZ3Q9NR90 486 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms