RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 TMEM258P61165 79 aa9.8□□□□□ -0.84
SNX12-202ENST00000374274 UBE2D4Q9Y2X8 147 aa9.8□□□□□ -0.84
SNX12-202ENST00000374274 ABCA12Q86UK0 2595 aa9.8□□□□□ -0.84
SNX12-202ENST00000374274 BAALC-AS2P0C853 105 aa9.8□□□□□ -0.84
SNX12-202ENST00000374274 PF4V1P10720 104 aa9.8□□□□□ -0.84
SNX12-202ENST00000374274 PRRC2AP48634 2157 aaKnown RBP9.8□□□□□ -0.84
SNX12-202ENST00000374274 WNK2Q9Y3S1 2297 aa9.8□□□□□ -0.84
SNX12-202ENST00000374274 SETXQ7Z333 2677 aaKnown RBP9.79□□□□□ -0.84
SNX12-202ENST00000374274 OVOL2Q9BRP0 275 aa9.79□□□□□ -0.84
SNX12-202ENST00000374274 PIK3CD-AS1Q5SR53 167 aa9.79□□□□□ -0.84
SNX12-202ENST00000374274 SPG11Q96JI7 2443 aa9.79□□□□□ -0.84
SNX12-202ENST00000374274 NOTCH2Q04721 2471 aa9.78□□□□□ -0.84
SNX12-202ENST00000374274 IGLV5-39A0A0G2JS06 123 aa9.78□□□□□ -0.84
SNX12-202ENST00000374274 PF4P02776 101 aa9.78□□□□□ -0.84
SNX12-202ENST00000374274 RPL18AQ02543 176 aaKnown RBP9.78□□□□□ -0.84
SNX12-202ENST00000374274 CHCHD7Q9BUK0 85 aa9.78□□□□□ -0.84
SNX12-202ENST00000374274 C22orf24Q9Y442 160 aa9.78□□□□□ -0.84
SNX12-202ENST00000374274 ATP5J2P56134 94 aa9.77□□□□□ -0.85
SNX12-202ENST00000374274 IGKV3-7A0A075B6H7 116 aa9.77□□□□□ -0.85
SNX12-202ENST00000374274 IGHV3OR16-10A0A075B7F0 116 aa9.76□□□□□ -0.85
SNX12-202ENST00000374274 A8MZ25 164 aa9.76□□□□□ -0.85
SNX12-202ENST00000374274 FAM19A3Q7Z5A8 133 aa9.76□□□□□ -0.85
SNX12-202ENST00000374274 KLK5Q9Y337 293 aaPredicted RBP9.76□□□□□ -0.85
SNX12-202ENST00000374274 USP9YO00507 2555 aaPredicted RBP9.76□□□□□ -0.85
SNX12-202ENST00000374274 Q6JHZ5 121 aa9.75□□□□□ -0.85
SNX12-202ENST00000374274 PTPN13Q12923 2485 aa9.75□□□□□ -0.85
SNX12-202ENST00000374274 SNRPD3P62318 126 aaKnown RBP9.75□□□□□ -0.85
SNX12-202ENST00000374274 CDKN2A-AS1Q9UH64 79 aa9.75□□□□□ -0.85
SNX12-202ENST00000374274 DOPEY2Q9Y3R5 2298 aa9.75□□□□□ -0.85
SNX12-202ENST00000374274 IGHG2P01859 326 aa9.74□□□□□ -0.85
SNX12-202ENST00000374274 MALP21145 153 aa9.74□□□□□ -0.85
SNX12-202ENST00000374274 SERP2Q8N6R1 65 aa9.74□□□□□ -0.85
SNX12-202ENST00000374274 BPESC1Q9GZL8 116 aa9.74□□□□□ -0.85
SNX12-202ENST00000374274 FBN2P35556 2912 aa9.73□□□□□ -0.85
SNX12-202ENST00000374274 RPL28P46779 137 aaKnown RBP9.73□□□□□ -0.85
SNX12-202ENST00000374274 HIST2H2BCQ6DN03 193 aa9.73□□□□□ -0.85
SNX12-202ENST00000374274 HIST2H2BDQ6DRA6 164 aa9.73□□□□□ -0.85
SNX12-202ENST00000374274 Q9H8V8 135 aa9.73□□□□□ -0.85
SNX12-202ENST00000374274 TRAV12-2A0A075B6T6 113 aa9.73□□□□□ -0.85
SNX12-202ENST00000374274 LMO4P61968 165 aa9.73□□□□□ -0.85
SNX12-202ENST00000374274 Q8N2B8 174 aa9.73□□□□□ -0.85
SNX12-202ENST00000374274 UBR5O95071 2799 aaPredicted RBP9.72□□□□□ -0.85
SNX12-202ENST00000374274 TRAV25A0A0B4J276 109 aa9.72□□□□□ -0.85
SNX12-202ENST00000374274 hADV29S1A0JD25 119 aa9.72□□□□□ -0.85
SNX12-202ENST00000374274 IGLV1-40P01703 118 aa9.72□□□□□ -0.85
SNX12-202ENST00000374274 IGHV3-11P01762 117 aa9.72□□□□□ -0.85
SNX12-202ENST00000374274 RNASE13Q5GAN3 156 aaKnown RBP9.72□□□□□ -0.85
SNX12-202ENST00000374274 PRIMA1Q86XR5 153 aa9.72□□□□□ -0.85
SNX12-202ENST00000374274 DPH3Q96FX2 82 aa9.72□□□□□ -0.85
SNX12-202ENST00000374274 TRAV13-2A0A0B4J235 113 aa9.72□□□□□ -0.85
SNX12-202ENST00000374274 DNAL4O96015 105 aa9.72□□□□□ -0.85
SNX12-202ENST00000374274 UPK3BQ9BT76 320 aa9.72□□□□□ -0.85
SNX12-202ENST00000374274 SOSTDC1Q6X4U4 206 aa9.71□□□□□ -0.85
SNX12-202ENST00000374274 OBSCN-AS1Q96MR7 158 aa9.71□□□□□ -0.85
SNX12-202ENST00000374274 K7EQG2 157 aa9.71□□□□□ -0.86
SNX12-202ENST00000374274 LINC00467Q9BRT7 94 aa9.71□□□□□ -0.86
SNX12-202ENST00000374274 ITPR2Q14571 2701 aa9.7□□□□□ -0.86
SNX12-202ENST00000374274 SPINK13Q1W4C9 94 aa9.7□□□□□ -0.86
SNX12-202ENST00000374274 ZNF625Q96I27 306 aaPredicted RBP9.7□□□□□ -0.86
SNX12-202ENST00000374274 FAM218AQ96MZ4 157 aa9.7□□□□□ -0.86
SNX12-202ENST00000374274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.69□□□□□ -0.86
SNX12-202ENST00000374274 IGKV2-29A2NJV5 120 aaPredicted RBP9.69□□□□□ -0.86
SNX12-202ENST00000374274 CCL19Q99731 98 aa9.69□□□□□ -0.86
SNX12-202ENST00000374274 PIMREGQ9BSJ6 248 aa9.69□□□□□ -0.86
SNX12-202ENST00000374274 ZNF469Q96JG9 3925 aaPredicted RBP9.68□□□□□ -0.86
SNX12-202ENST00000374274 SMIM1B2RUZ4 78 aa9.68□□□□□ -0.86
SNX12-202ENST00000374274 NDUFC2-KCTD14E9PQ53 114 aa9.68□□□□□ -0.86
SNX12-202ENST00000374274 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.68□□□□□ -0.86
SNX12-202ENST00000374274 MED13LQ71F56 2210 aa9.68□□□□□ -0.86
SNX12-202ENST00000374274 CFHR3Q02985 330 aa9.67□□□□□ -0.86
SNX12-202ENST00000374274 H0YGX0 51 aa9.67□□□□□ -0.86
SNX12-202ENST00000374274 IGHV3-53P01767 116 aa9.67□□□□□ -0.86
SNX12-202ENST00000374274 LINC00242Q5T6M2 205 aa9.67□□□□□ -0.86
SNX12-202ENST00000374274 DGAT2L7PQ6IED9 249 aa9.66□□□□□ -0.86
SNX12-202ENST00000374274 IGHV3OR16-12A0A075B7B8 117 aa9.66□□□□□ -0.86
SNX12-202ENST00000374274 IGKV3-20P01619 116 aa9.66□□□□□ -0.86
SNX12-202ENST00000374274 CRPP02741 224 aa9.66□□□□□ -0.86
SNX12-202ENST00000374274 PROK1P58294 105 aa9.66□□□□□ -0.86
SNX12-202ENST00000374274 COX6A2Q02221 97 aa9.66□□□□□ -0.86
SNX12-202ENST00000374274 A6NDX4 124 aa9.65□□□□□ -0.86
SNX12-202ENST00000374274 IGHV3-73A0A0B4J1V6 119 aa9.65□□□□□ -0.87
SNX12-202ENST00000374274 TRAV13-1A0A0B4J241 112 aa9.65□□□□□ -0.87
SNX12-202ENST00000374274 A8MTW9 85 aa9.65□□□□□ -0.87
SNX12-202ENST00000374274 EDN2P20800 178 aa9.65□□□□□ -0.87
SNX12-202ENST00000374274 C10orf105Q8TEF2 133 aa9.65□□□□□ -0.87
SNX12-202ENST00000374274 CYSTM1Q9H1C7 97 aa9.65□□□□□ -0.87
SNX12-202ENST00000374274 CCDC168Q8NDH2 2452 aa9.65□□□□□ -0.87
SNX12-202ENST00000374274 USP17L23D6RBM5 183 aa9.64□□□□□ -0.87
SNX12-202ENST00000374274 ATP5EP2Q5VTU8 51 aa9.64□□□□□ -0.87
SNX12-202ENST00000374274 IGHV4-61A0A0C4DH41 118 aa9.64□□□□□ -0.87
SNX12-202ENST00000374274 S100A7L2Q5SY68 101 aa9.64□□□□□ -0.87
SNX12-202ENST00000374274 NDUFC2O95298 119 aa9.63□□□□□ -0.87
SNX12-202ENST00000374274 Q9HAA7 133 aa9.63□□□□□ -0.87
SNX12-202ENST00000374274 ZANQ9Y493 2812 aa9.63□□□□□ -0.87
SNX12-202ENST00000374274 DOPEY1Q5JWR5 2465 aa9.63□□□□□ -0.87
SNX12-202ENST00000374274 TMEM89A2RUT3 159 aa9.63□□□□□ -0.87
SNX12-202ENST00000374274 RBMY1A1P0DJD3 496 aaKnown RBP9.63□□□□□ -0.87
SNX12-202ENST00000374274 RBMY1CP0DJD4 496 aa9.63□□□□□ -0.87
SNX12-202ENST00000374274 RBMY1FQ15415 496 aaKnown RBP9.63□□□□□ -0.87
SNX12-202ENST00000374274 LINC01561Q8N1V8 128 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms