RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 MRPS36P82909 103 aaKnown RBP11.41□□□□□ -0.58
CNKSR1-202ENST00000374253 DGAT2L7PQ6IED9 249 aa11.41□□□□□ -0.58
CNKSR1-202ENST00000374253 CSNK1G2-AS1Q8NCQ2 148 aa11.41□□□□□ -0.58
CNKSR1-202ENST00000374253 TEP1Q99973 2627 aaKnown RBP11.4□□□□□ -0.58
CNKSR1-202ENST00000374253 RBX1P62877 108 aa11.4□□□□□ -0.58
CNKSR1-202ENST00000374253 RRN3P1Q2M238 152 aa11.4□□□□□ -0.58
CNKSR1-202ENST00000374253 NTM-AS1Q6ZSK4 140 aa11.4□□□□□ -0.58
CNKSR1-202ENST00000374253 C10orf126Q8N4M7 172 aa11.4□□□□□ -0.58
CNKSR1-202ENST00000374253 TIMM21Q9BVV7 248 aa11.4□□□□□ -0.58
CNKSR1-202ENST00000374253 H3BMG7 143 aa11.4□□□□□ -0.59
CNKSR1-202ENST00000374253 IGHV3-30P01768 117 aa11.4□□□□□ -0.59
CNKSR1-202ENST00000374253 IGHV3-30-5P0DP03 117 aa11.4□□□□□ -0.59
CNKSR1-202ENST00000374253 SPANXA1Q9NS26 97 aa11.4□□□□□ -0.59
CNKSR1-202ENST00000374253 TRAV4A0A0B4J268 109 aa11.39□□□□□ -0.59
CNKSR1-202ENST00000374253 RPL36AP83881 106 aaKnown RBP11.39□□□□□ -0.59
CNKSR1-202ENST00000374253 RPL36ALQ969Q0 106 aaKnown RBP11.39□□□□□ -0.59
CNKSR1-202ENST00000374253 A0A1B0GWB2 263 aa11.39□□□□□ -0.59
CNKSR1-202ENST00000374253 LINC00482Q8N8I6 264 aa11.39□□□□□ -0.59
CNKSR1-202ENST00000374253 OR5A1Q8NGJ0 315 aa11.39□□□□□ -0.59
CNKSR1-202ENST00000374253 NDUFA11Q86Y39 141 aa11.38□□□□□ -0.59
CNKSR1-202ENST00000374253 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.38□□□□□ -0.59
CNKSR1-202ENST00000374253 C16orf74Q96GX8 76 aa11.38□□□□□ -0.59
CNKSR1-202ENST00000374253 CMC4P56277 68 aaPredicted RBP11.37□□□□□ -0.59
CNKSR1-202ENST00000374253 GEMIN7Q9H840 131 aaKnown RBP11.37□□□□□ -0.59
CNKSR1-202ENST00000374253 CDKN2A-AS1Q9UH64 79 aa11.37□□□□□ -0.59
CNKSR1-202ENST00000374253 UBE2D1P51668 147 aa11.37□□□□□ -0.59
CNKSR1-202ENST00000374253 COX6A2Q02221 97 aa11.37□□□□□ -0.59
CNKSR1-202ENST00000374253 DAZ2Q13117 558 aaKnown RBP11.37□□□□□ -0.59
CNKSR1-202ENST00000374253 DEFB130BP0DP73 79 aa11.36□□□□□ -0.59
CNKSR1-202ENST00000374253 DEFB130AP0DP74 79 aa11.36□□□□□ -0.59
CNKSR1-202ENST00000374253 NPC2P61916 151 aa11.36□□□□□ -0.59
CNKSR1-202ENST00000374253 TRAV13-1A0A0B4J241 112 aa11.36□□□□□ -0.59
CNKSR1-202ENST00000374253 LOC107984156A0A0G2JMH3 177 aa11.36□□□□□ -0.59
CNKSR1-202ENST00000374253 TSPAN13O95857 204 aa11.36□□□□□ -0.59
CNKSR1-202ENST00000374253 CFC1BP0CG36 223 aa11.36□□□□□ -0.59
CNKSR1-202ENST00000374253 CFC1P0CG37 223 aa11.36□□□□□ -0.59
CNKSR1-202ENST00000374253 ARL17AQ8IVW1 177 aa11.36□□□□□ -0.59
CNKSR1-202ENST00000374253 C1QTNF4Q9BXJ3 329 aa11.36□□□□□ -0.59
CNKSR1-202ENST00000374253 TRGV4A0A0C4DH28 118 aa11.35□□□□□ -0.59
CNKSR1-202ENST00000374253 A0A0J9YXY3 114 aa11.35□□□□□ -0.59
CNKSR1-202ENST00000374253 TINCRA0A1B0GVN0 87 aa11.35□□□□□ -0.59
CNKSR1-202ENST00000374253 CRLF1O75462 422 aa11.35□□□□□ -0.59
CNKSR1-202ENST00000374253 UBE2D3P61077 147 aa11.35□□□□□ -0.59
CNKSR1-202ENST00000374253 UBE2D2P62837 147 aa11.35□□□□□ -0.59
CNKSR1-202ENST00000374253 MUSTN1Q8IVN3 82 aa11.35□□□□□ -0.59
CNKSR1-202ENST00000374253 SPANXB1Q9NS25 103 aaPredicted RBP11.35□□□□□ -0.59
CNKSR1-202ENST00000374253 IGHV1-58A0A0C4DH39 117 aa11.34□□□□□ -0.59
CNKSR1-202ENST00000374253 A4D1N5 150 aa11.34□□□□□ -0.59
CNKSR1-202ENST00000374253 FAM110AQ9BQ89 295 aa11.34□□□□□ -0.59
CNKSR1-202ENST00000374253 H7C2G1 150 aa11.34□□□□□ -0.59
CNKSR1-202ENST00000374253 WFDC2Q14508 124 aa11.34□□□□□ -0.59
CNKSR1-202ENST00000374253 NDUFA12Q9UI09 145 aa11.34□□□□□ -0.59
CNKSR1-202ENST00000374253 TRBV10-1A0A0K0K1A3 114 aa11.33□□□□□ -0.6
CNKSR1-202ENST00000374253 EIF4EBP3O60516 100 aaPredicted RBP11.33□□□□□ -0.6
CNKSR1-202ENST00000374253 RPL24P83731 157 aaKnown RBP11.33□□□□□ -0.6
CNKSR1-202ENST00000374253 VSIG2Q96IQ7 327 aa11.33□□□□□ -0.6
CNKSR1-202ENST00000374253 PRSS2P07478 247 aa11.33□□□□□ -0.6
CNKSR1-202ENST00000374253 CRYBA4P53673 196 aa11.33□□□□□ -0.6
CNKSR1-202ENST00000374253 PCP4P48539 62 aa11.32□□□□□ -0.6
CNKSR1-202ENST00000374253 ADAMTSL4-AS1Q5T5F5 129 aa11.32□□□□□ -0.6
CNKSR1-202ENST00000374253 DAZ4Q86SG3 579 aaKnown RBP11.32□□□□□ -0.6
CNKSR1-202ENST00000374253 DAZ3Q9NR90 486 aaKnown RBP11.32□□□□□ -0.6
CNKSR1-202ENST00000374253 IGKV3OR2-268A0A0C4DH90 116 aa11.32□□□□□ -0.6
CNKSR1-202ENST00000374253 DAND5Q8N907 189 aa11.32□□□□□ -0.6
CNKSR1-202ENST00000374253 VPS25Q9BRG1 176 aa11.32□□□□□ -0.6
CNKSR1-202ENST00000374253 F8P00451 2351 aa11.31□□□□□ -0.6
CNKSR1-202ENST00000374253 DEFB4AO15263 64 aa11.31□□□□□ -0.6
CNKSR1-202ENST00000374253 LINC00242Q5T6M2 205 aa11.31□□□□□ -0.6
CNKSR1-202ENST00000374253 ZNF625Q96I27 306 aaPredicted RBP11.31□□□□□ -0.6
CNKSR1-202ENST00000374253 OVOL2Q9BRP0 275 aa11.3□□□□□ -0.6
CNKSR1-202ENST00000374253 A0A0U1RRA0 63 aa11.3□□□□□ -0.6
CNKSR1-202ENST00000374253 PSMB2P49721 201 aa11.3□□□□□ -0.6
CNKSR1-202ENST00000374253 FHL2Q14192 279 aa11.3□□□□□ -0.6
CNKSR1-202ENST00000374253 SH2D6Q7Z4S9 175 aa11.3□□□□□ -0.6
CNKSR1-202ENST00000374253 TMEM101Q96IK0 257 aa11.3□□□□□ -0.6
CNKSR1-202ENST00000374253 TMEM238C9JI98 176 aa11.29□□□□□ -0.6
CNKSR1-202ENST00000374253 K7ERU9 68 aa11.29□□□□□ -0.6
CNKSR1-202ENST00000374253 UBE2L6O14933 153 aa11.29□□□□□ -0.6
CNKSR1-202ENST00000374253 GAGE6Q13070 117 aa11.29□□□□□ -0.6
CNKSR1-202ENST00000374253 SBSPONQ8IVN8 264 aa11.29□□□□□ -0.6
CNKSR1-202ENST00000374253 LITAFQ99732 161 aa11.29□□□□□ -0.6
CNKSR1-202ENST00000374253 TEX48A0A1B0GUV7 120 aa11.29□□□□□ -0.6
CNKSR1-202ENST00000374253 CDC42SE2Q9NRR3 84 aa11.28□□□□□ -0.6
CNKSR1-202ENST00000374253 TMEM243Q9BU79 118 aa11.28□□□□□ -0.6
CNKSR1-202ENST00000374253 PRO1854Q9UHT4 67 aa11.28□□□□□ -0.6
CNKSR1-202ENST00000374253 A0A096LPF7 62 aa11.27□□□□□ -0.61
CNKSR1-202ENST00000374253 ETDBQ3ZM63 59 aa11.27□□□□□ -0.61
CNKSR1-202ENST00000374253 TRBV6-4A0A1B0GX49 114 aa11.27□□□□□ -0.61
CNKSR1-202ENST00000374253 DEFB135Q30KP9 77 aa11.27□□□□□ -0.61
CNKSR1-202ENST00000374253 TIRAPP58753 221 aa11.26□□□□□ -0.61
CNKSR1-202ENST00000374253 X6R8D5 127 aa11.26□□□□□ -0.61
CNKSR1-202ENST00000374253 SCGB1C2P0DMR2 95 aa11.25□□□□□ -0.61
CNKSR1-202ENST00000374253 ZFAND6Q6FIF0 208 aa11.25□□□□□ -0.61
CNKSR1-202ENST00000374253 HERVK_113P63121 156 aa11.25□□□□□ -0.61
CNKSR1-202ENST00000374253 IGLV4-60A0A075B6I1 120 aa11.24□□□□□ -0.61
CNKSR1-202ENST00000374253 IGLV5-45A0A087WSX0 123 aa11.24□□□□□ -0.61
CNKSR1-202ENST00000374253 TCL1BO95988 128 aa11.24□□□□□ -0.61
CNKSR1-202ENST00000374253 CHCHD5Q9BSY4 110 aa11.24□□□□□ -0.61
CNKSR1-202ENST00000374253 Q9H8V8 135 aa11.24□□□□□ -0.61
CNKSR1-202ENST00000374253 PRO0461Q9UI25 63 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms