RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SBSPONQ8IVN8 264 aa13.85□□□□□ -0.19
HDAC1-201ENST00000373548 H3BRM9 83 aa13.84□□□□□ -0.19
HDAC1-201ENST00000373548 HIST1H4GQ99525 98 aa13.84□□□□□ -0.19
HDAC1-201ENST00000373548 J3QQQ9 107 aa13.84□□□□□ -0.19
HDAC1-201ENST00000373548 LEPROTO15243 131 aa13.83□□□□□ -0.2
HDAC1-201ENST00000373548 DGAT2L7PQ6IED9 249 aa13.83□□□□□ -0.2
HDAC1-201ENST00000373548 GTSF1LQ9H1H1 148 aa13.83□□□□□ -0.2
HDAC1-201ENST00000373548 TRRAPQ9Y4A5 3859 aa13.83□□□□□ -0.2
HDAC1-201ENST00000373548 TINCRA0A1B0GVN0 87 aa13.82□□□□□ -0.2
HDAC1-201ENST00000373548 SCGB1D4Q6XE38 83 aa13.82□□□□□ -0.2
HDAC1-201ENST00000373548 IGHV3-64A0A075B6Q5 118 aa13.82□□□□□ -0.2
HDAC1-201ENST00000373548 LGALS3P17931 250 aaKnown RBP13.81□□□□□ -0.2
HDAC1-201ENST00000373548 UBE2D1P51668 147 aa13.81□□□□□ -0.2
HDAC1-201ENST00000373548 PTTG1IPP53801 180 aa13.81□□□□□ -0.2
HDAC1-201ENST00000373548 CSDC2Q9Y534 153 aaKnown RBP13.81□□□□□ -0.2
HDAC1-201ENST00000373548 NBEAL2Q6ZNJ1 2754 aa13.8□□□□□ -0.2
HDAC1-201ENST00000373548 VAMP3Q15836 100 aa13.8□□□□□ -0.2
HDAC1-201ENST00000373548 A0A0J9YY99 117 aa13.79□□□□□ -0.2
HDAC1-201ENST00000373548 FAM222AQ5U5X8 452 aa13.79□□□□□ -0.2
HDAC1-201ENST00000373548 RAB37Q96AX2 223 aa13.79□□□□□ -0.2
HDAC1-201ENST00000373548 TMEM243Q9BU79 118 aa13.79□□□□□ -0.2
HDAC1-201ENST00000373548 C9orf118A6NHY6 69 aa13.79□□□□□ -0.2
HDAC1-201ENST00000373548 IGHV4-30-4P0DP06 118 aa13.79□□□□□ -0.2
HDAC1-201ENST00000373548 SMIM13P0DJ93 91 aa13.78□□□□□ -0.2
HDAC1-201ENST00000373548 UBE2V1Q13404 147 aa13.78□□□□□ -0.2
HDAC1-201ENST00000373548 NHP2Q9NX24 153 aaKnown RBP13.78□□□□□ -0.2
HDAC1-201ENST00000373548 LYRM9A8MSI8 78 aa13.78□□□□□ -0.2
HDAC1-201ENST00000373548 K7ERJ3 54 aa13.78□□□□□ -0.2
HDAC1-201ENST00000373548 IGHV4-28A0A0C4DH34 117 aa13.77□□□□□ -0.21
HDAC1-201ENST00000373548 DEFB4AO15263 64 aa13.77□□□□□ -0.21
HDAC1-201ENST00000373548 CCL25O15444 150 aa13.77□□□□□ -0.21
HDAC1-201ENST00000373548 TRAV8-3A0A0A6YYJ7 113 aa13.76□□□□□ -0.21
HDAC1-201ENST00000373548 IGHV3-30-3P0DP02 117 aa13.76□□□□□ -0.21
HDAC1-201ENST00000373548 OXLD1Q5BKU9 147 aa13.76□□□□□ -0.21
HDAC1-201ENST00000373548 AMMECR1LQ6DCA0 310 aa13.76□□□□□ -0.21
HDAC1-201ENST00000373548 GEMIN7Q9H840 131 aaKnown RBP13.76□□□□□ -0.21
HDAC1-201ENST00000373548 OR5A1Q8NGJ0 315 aa13.76□□□□□ -0.21
HDAC1-201ENST00000373548 NAA38Q9BRA0 125 aaKnown RBP13.76□□□□□ -0.21
HDAC1-201ENST00000373548 CDC42SE2Q9NRR3 84 aa13.76□□□□□ -0.21
HDAC1-201ENST00000373548 H3BUT2 72 aa13.75□□□□□ -0.21
HDAC1-201ENST00000373548 UBE2L6O14933 153 aa13.75□□□□□ -0.21
HDAC1-201ENST00000373548 TIRAPP58753 221 aa13.75□□□□□ -0.21
HDAC1-201ENST00000373548 SMAGPQ0VAQ4 97 aa13.75□□□□□ -0.21
HDAC1-201ENST00000373548 IGLV5-45A0A087WSX0 123 aa13.75□□□□□ -0.21
HDAC1-201ENST00000373548 IGHV1-58A0A0C4DH39 117 aa13.75□□□□□ -0.21
HDAC1-201ENST00000373548 SRSF9Q13242 221 aaKnown RBP eCLIP13.75□□□□□ -0.21
HDAC1-201ENST00000373548 C3orf56Q8N813 242 aa13.75□□□□□ -0.21
HDAC1-201ENST00000373548 Q8NAQ8 132 aa13.75□□□□□ -0.21
HDAC1-201ENST00000373548 TRBV6-8A0A0A6YYG3 113 aa13.74□□□□□ -0.21
HDAC1-201ENST00000373548 CDKN2A-AS1Q9UH64 79 aa13.74□□□□□ -0.21
HDAC1-201ENST00000373548 H7C423 109 aa13.73□□□□□ -0.21
HDAC1-201ENST00000373548 SPINK8P0C7L1 97 aa13.73□□□□□ -0.21
HDAC1-201ENST00000373548 GYPEP15421 78 aa13.73□□□□□ -0.21
HDAC1-201ENST00000373548 COX6A2Q02221 97 aa13.73□□□□□ -0.21
HDAC1-201ENST00000373548 LINC00242Q5T6M2 205 aa13.73□□□□□ -0.21
HDAC1-201ENST00000373548 VSIG2Q96IQ7 327 aa13.73□□□□□ -0.21
HDAC1-201ENST00000373548 SPANXB1Q9NS25 103 aaPredicted RBP13.73□□□□□ -0.21
HDAC1-201ENST00000373548 C12orf74Q32Q52 190 aa13.73□□□□□ -0.21
HDAC1-201ENST00000373548 FAM19A3Q7Z5A8 133 aa13.73□□□□□ -0.21
HDAC1-201ENST00000373548 RNF183Q96D59 192 aa13.73□□□□□ -0.21
HDAC1-201ENST00000373548 FBN1P35555 2871 aaKnown RBP13.72□□□□□ -0.21
HDAC1-201ENST00000373548 MIFP14174 115 aa13.72□□□□□ -0.21
HDAC1-201ENST00000373548 KRTAP10-11P60412 298 aa13.72□□□□□ -0.21
HDAC1-201ENST00000373548 PRO0255Q9UI72 69 aa13.72□□□□□ -0.21
HDAC1-201ENST00000373548 PRIMA1Q86XR5 153 aa13.72□□□□□ -0.21
HDAC1-201ENST00000373548 C10orf126Q8N4M7 172 aa13.72□□□□□ -0.21
HDAC1-201ENST00000373548 TMEM101Q96IK0 257 aa13.72□□□□□ -0.21
HDAC1-201ENST00000373548 TRAV13-1A0A0B4J241 112 aa13.71□□□□□ -0.21
HDAC1-201ENST00000373548 GAGE6Q13070 117 aa13.71□□□□□ -0.21
HDAC1-201ENST00000373548 SHISA2Q6UWI4 295 aa13.71□□□□□ -0.21
HDAC1-201ENST00000373548 A0A1B0GWB2 263 aa13.7□□□□□ -0.22
HDAC1-201ENST00000373548 HERVK_113P63121 156 aa13.7□□□□□ -0.22
HDAC1-201ENST00000373548 CELA1Q9UNI1 258 aa13.7□□□□□ -0.22
HDAC1-201ENST00000373548 A8MZ25 164 aa13.7□□□□□ -0.22
HDAC1-201ENST00000373548 ATP6V0E2Q8NHE4 81 aa13.7□□□□□ -0.22
HDAC1-201ENST00000373548 STAB1Q9NY15 2570 aa13.69□□□□□ -0.22
HDAC1-201ENST00000373548 IGHV3-30P01768 117 aa13.69□□□□□ -0.22
HDAC1-201ENST00000373548 IGHV3-30-5P0DP03 117 aa13.69□□□□□ -0.22
HDAC1-201ENST00000373548 DAD1P61803 113 aa13.69□□□□□ -0.22
HDAC1-201ENST00000373548 A0A0J9YXY3 114 aa13.68□□□□□ -0.22
HDAC1-201ENST00000373548 A0A1W2PPM0 123 aa13.68□□□□□ -0.22
HDAC1-201ENST00000373548 SAMD5Q5TGI4 173 aa13.68□□□□□ -0.22
HDAC1-201ENST00000373548 CHCHD5Q9BSY4 110 aa13.68□□□□□ -0.22
HDAC1-201ENST00000373548 PAX4O43316 350 aa13.67□□□□□ -0.22
HDAC1-201ENST00000373548 EGFEM1PQ0D2K5 195 aa13.67□□□□□ -0.22
HDAC1-201ENST00000373548 NDUFA12Q9UI09 145 aa13.67□□□□□ -0.22
HDAC1-201ENST00000373548 IGLV4-60A0A075B6I1 120 aa13.66□□□□□ -0.22
HDAC1-201ENST00000373548 TMEM238LA0A1B0GVL6 79 aa13.66□□□□□ -0.22
HDAC1-201ENST00000373548 A6NJY4 79 aa13.66□□□□□ -0.22
HDAC1-201ENST00000373548 ZFAND6Q6FIF0 208 aa13.66□□□□□ -0.22
HDAC1-201ENST00000373548 IGLL5B9A064 214 aa13.65□□□□□ -0.22
HDAC1-201ENST00000373548 IGLV5-39A0A0G2JS06 123 aa13.64□□□□□ -0.23
HDAC1-201ENST00000373548 GAGE10A6NGK3 116 aa13.64□□□□□ -0.23
HDAC1-201ENST00000373548 SPART-AS1P0CW21 52 aa13.64□□□□□ -0.23
HDAC1-201ENST00000373548 COL6A5A8TX70 2615 aa13.64□□□□□ -0.23
HDAC1-201ENST00000373548 A0A096LPF7 62 aa13.63□□□□□ -0.23
HDAC1-201ENST00000373548 SMIM1B2RUZ4 78 aa13.63□□□□□ -0.23
HDAC1-201ENST00000373548 TMEM238C9JI98 176 aa13.63□□□□□ -0.23
HDAC1-201ENST00000373548 K7EP34 96 aa13.63□□□□□ -0.23
HDAC1-201ENST00000373548 ATP5G1P05496 136 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms