RNA–Protein interactions for RNA: ENST00000372858.7

PABPC4-203, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-203ENST00000372858 SLURP1P55000 103 aa12.01□□□□□ -0.49
PABPC4-203ENST00000372858 TIRAPP58753 221 aa12.01□□□□□ -0.49
PABPC4-203ENST00000372858 DEFB136Q30KP8 78 aa12.01□□□□□ -0.49
PABPC4-203ENST00000372858 DEFB121Q5J5C9 76 aa12.01□□□□□ -0.49
PABPC4-203ENST00000372858 DGAT2L7PQ6IED9 249 aa12.01□□□□□ -0.49
PABPC4-203ENST00000372858 TMEM101Q96IK0 257 aa12.01□□□□□ -0.49
PABPC4-203ENST00000372858 LRRK2Q5S007 2527 aa12□□□□□ -0.49
PABPC4-203ENST00000372858 ZNF702PQ9H963 129 aa12□□□□□ -0.49
PABPC4-203ENST00000372858 ABCA12Q86UK0 2595 aa12□□□□□ -0.49
PABPC4-203ENST00000372858 DNAJC30Q96LL9 226 aa12□□□□□ -0.49
PABPC4-203ENST00000372858 RBMY1BA6NDE4 496 aaKnown RBP11.99□□□□□ -0.49
PABPC4-203ENST00000372858 RBMY1EA6NEQ0 496 aaKnown RBP11.99□□□□□ -0.49
PABPC4-203ENST00000372858 IGHV3-53P01767 116 aa11.99□□□□□ -0.49
PABPC4-203ENST00000372858 RBMY1DP0C7P1 496 aaKnown RBP11.99□□□□□ -0.49
PABPC4-203ENST00000372858 LINC01587Q99440 93 aa11.99□□□□□ -0.49
PABPC4-203ENST00000372858 CITED2Q99967 270 aaPredicted RBP11.99□□□□□ -0.49
PABPC4-203ENST00000372858 IGLV5-45A0A087WSX0 123 aa11.98□□□□□ -0.49
PABPC4-203ENST00000372858 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.98□□□□□ -0.49
PABPC4-203ENST00000372858 A8MTW9 85 aa11.97□□□□□ -0.49
PABPC4-203ENST00000372858 LINC00308Q8TCZ7 52 aa11.97□□□□□ -0.49
PABPC4-203ENST00000372858 NACAE9PAV3 2078 aa11.97□□□□□ -0.49
PABPC4-203ENST00000372858 Q6YL49 198 aa11.97□□□□□ -0.49
PABPC4-203ENST00000372858 C18orf65Q6ZTR6 163 aa11.97□□□□□ -0.49
PABPC4-203ENST00000372858 Q9H8V8 135 aa11.97□□□□□ -0.49
PABPC4-203ENST00000372858 COX6A2Q02221 97 aa11.96□□□□□ -0.49
PABPC4-203ENST00000372858 A0A0U1RRA0 63 aa11.96□□□□□ -0.49
PABPC4-203ENST00000372858 ZNF625Q96I27 306 aaPredicted RBP11.96□□□□□ -0.49
PABPC4-203ENST00000372858 PEMTQ9UBM1 199 aa11.96□□□□□ -0.49
PABPC4-203ENST00000372858 ANKRD17O75179 2603 aaKnown RBP11.95□□□□□ -0.5
PABPC4-203ENST00000372858 IGSF10Q6WRI0 2623 aa11.95□□□□□ -0.5
PABPC4-203ENST00000372858 IGHV3OR16-12A0A075B7B8 117 aa11.95□□□□□ -0.5
PABPC4-203ENST00000372858 HERVK_113P63121 156 aa11.95□□□□□ -0.5
PABPC4-203ENST00000372858 C11orf72Q8NBR9 251 aa11.95□□□□□ -0.5
PABPC4-203ENST00000372858 KHDC1LQ5JSQ8 128 aa11.94□□□□□ -0.5
PABPC4-203ENST00000372858 DYNLRB2Q8TF09 96 aa11.94□□□□□ -0.5
PABPC4-203ENST00000372858 IGLV5-39A0A0G2JS06 123 aa11.94□□□□□ -0.5
PABPC4-203ENST00000372858 COX7A2LO14548 114 aa11.94□□□□□ -0.5
PABPC4-203ENST00000372858 BEAN1Q3B7T3 259 aa11.94□□□□□ -0.5
PABPC4-203ENST00000372858 RS1O15537 224 aa11.93□□□□□ -0.5
PABPC4-203ENST00000372858 LINC00242Q5T6M2 205 aa11.93□□□□□ -0.5
PABPC4-203ENST00000372858 NOTCH3Q9UM47 2321 aa11.93□□□□□ -0.5
PABPC4-203ENST00000372858 A0A096LNT2 108 aa11.93□□□□□ -0.5
PABPC4-203ENST00000372858 MAP6D1Q9H9H5 199 aa11.93□□□□□ -0.5
PABPC4-203ENST00000372858 PTPN13Q12923 2485 aa11.93□□□□□ -0.5
PABPC4-203ENST00000372858 COPS9Q8WXC6 57 aa11.92□□□□□ -0.5
PABPC4-203ENST00000372858 INSP01308 110 aa11.92□□□□□ -0.5
PABPC4-203ENST00000372858 CFAP161Q6P656 301 aa11.92□□□□□ -0.5
PABPC4-203ENST00000372858 TRBV7-7A0A0K0K1E9 115 aa11.91□□□□□ -0.5
PABPC4-203ENST00000372858 ACYP1P07311 99 aa11.91□□□□□ -0.5
PABPC4-203ENST00000372858 SONP18583 2426 aaKnown RBP11.9□□□□□ -0.5
PABPC4-203ENST00000372858 MEIG1Q5JSS6 88 aa11.9□□□□□ -0.5
PABPC4-203ENST00000372858 MYO9AB2RTY4 2548 aa11.9□□□□□ -0.5
PABPC4-203ENST00000372858 SHISA2Q6UWI4 295 aa11.9□□□□□ -0.5
PABPC4-203ENST00000372858 SOSTDC1Q6X4U4 206 aa11.9□□□□□ -0.5
PABPC4-203ENST00000372858 CHCHD5Q9BSY4 110 aa11.9□□□□□ -0.5
PABPC4-203ENST00000372858 TRAV13-1A0A0B4J241 112 aa11.9□□□□□ -0.51
PABPC4-203ENST00000372858 Q8N2B8 174 aa11.9□□□□□ -0.51
PABPC4-203ENST00000372858 EPG5Q9HCE0 2579 aa11.89□□□□□ -0.51
PABPC4-203ENST00000372858 SMIM1B2RUZ4 78 aa11.89□□□□□ -0.51
PABPC4-203ENST00000372858 PRIMA1Q86XR5 153 aa11.89□□□□□ -0.51
PABPC4-203ENST00000372858 NDUFA7O95182 113 aa11.89□□□□□ -0.51
PABPC4-203ENST00000372858 FSHBP01225 129 aa11.89□□□□□ -0.51
PABPC4-203ENST00000372858 LINC00694P0DN24 101 aa11.89□□□□□ -0.51
PABPC4-203ENST00000372858 XCL2Q9UBD3 114 aa11.89□□□□□ -0.51
PABPC4-203ENST00000372858 DEFB114Q30KQ6 69 aa11.88□□□□□ -0.51
PABPC4-203ENST00000372858 C4orf3Q8WVX3 66 aa11.88□□□□□ -0.51
PABPC4-203ENST00000372858 MXRA5Q9NR99 2828 aa11.87□□□□□ -0.51
PABPC4-203ENST00000372858 ZNF462Q96JM2 2506 aa11.87□□□□□ -0.51
PABPC4-203ENST00000372858 FBN2P35556 2912 aa11.87□□□□□ -0.51
PABPC4-203ENST00000372858 BAALC-AS2P0C853 105 aa11.86□□□□□ -0.51
PABPC4-203ENST00000372858 IGHV4-31P0DP07 118 aa11.86□□□□□ -0.51
PABPC4-203ENST00000372858 FAM19A3Q7Z5A8 133 aa11.86□□□□□ -0.51
PABPC4-203ENST00000372858 CCDC168Q8NDH2 2452 aa11.86□□□□□ -0.51
PABPC4-203ENST00000372858 TRACP01848 142 aa11.86□□□□□ -0.51
PABPC4-203ENST00000372858 DAZ2Q13117 558 aaKnown RBP11.86□□□□□ -0.51
PABPC4-203ENST00000372858 DAZ4Q86SG3 579 aaKnown RBP11.86□□□□□ -0.51
PABPC4-203ENST00000372858 IMUPQ9GZP8 106 aa11.86□□□□□ -0.51
PABPC4-203ENST00000372858 DAZ3Q9NR90 486 aaKnown RBP11.86□□□□□ -0.51
PABPC4-203ENST00000372858 CSDC2Q9Y534 153 aaKnown RBP11.85□□□□□ -0.51
PABPC4-203ENST00000372858 TRGV1A0A0A0MS02 117 aa11.85□□□□□ -0.51
PABPC4-203ENST00000372858 RPL36AP83881 106 aaKnown RBP11.85□□□□□ -0.51
PABPC4-203ENST00000372858 RPL36ALQ969Q0 106 aaKnown RBP11.85□□□□□ -0.51
PABPC4-203ENST00000372858 NF1P21359 2839 aa11.85□□□□□ -0.51
PABPC4-203ENST00000372858 HERV-K104P63124 156 aa11.84□□□□□ -0.51
PABPC4-203ENST00000372858 STHQ8IWL8 128 aa11.84□□□□□ -0.51
PABPC4-203ENST00000372858 FAM236AA0A1B0GUQ0 79 aa11.84□□□□□ -0.51
PABPC4-203ENST00000372858 FAM236BA0A1B0GV22 79 aa11.84□□□□□ -0.51
PABPC4-203ENST00000372858 SMIM20Q8N5G0 67 aa11.84□□□□□ -0.51
PABPC4-203ENST00000372858 NTM-AS1Q6ZSK4 140 aa11.83□□□□□ -0.52
PABPC4-203ENST00000372858 LINC00643Q86TS7 51 aa11.83□□□□□ -0.52
PABPC4-203ENST00000372858 ZNF469Q96JG9 3925 aaPredicted RBP11.83□□□□□ -0.52
PABPC4-203ENST00000372858 HIST2H2BDQ6DRA6 164 aa11.83□□□□□ -0.52
PABPC4-203ENST00000372858 CDC42SE2Q9NRR3 84 aa11.83□□□□□ -0.52
PABPC4-203ENST00000372858 NBPF19A0A087WUL8 3843 aa11.82□□□□□ -0.52
PABPC4-203ENST00000372858 F5H768 121 aa11.82□□□□□ -0.52
PABPC4-203ENST00000372858 SMCR5Q8TEV8 140 aa11.82□□□□□ -0.52
PABPC4-203ENST00000372858 WNK1Q9H4A3 2382 aa11.82□□□□□ -0.52
PABPC4-203ENST00000372858 NIPBLQ6KC79 2804 aaeCLIP11.82□□□□□ -0.521e-6■■■■□ 23.7
PABPC4-203ENST00000372858 TRBV10-1A0A0K0K1A3 114 aa11.81□□□□□ -0.52
PABPC4-203ENST00000372858 FAM218AQ96MZ4 157 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms