RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 NFE4Q86UQ8 179 aa11.32□□□□□ -0.6
C9orf78-201ENST00000372447 C11orf68Q9H3H3 251 aaKnown RBP11.32□□□□□ -0.6
C9orf78-201ENST00000372447 TRGV2A0A075B6R0 118 aa11.31□□□□□ -0.6
C9orf78-201ENST00000372447 MYMXA0A1B0GTQ4 84 aa11.31□□□□□ -0.6
C9orf78-201ENST00000372447 CRYBA4P53673 196 aa11.31□□□□□ -0.6
C9orf78-201ENST00000372447 RPL36AP83881 106 aaKnown RBP11.31□□□□□ -0.6
C9orf78-201ENST00000372447 GAGE1Q13065 139 aa11.31□□□□□ -0.6
C9orf78-201ENST00000372447 RPL36ALQ969Q0 106 aaKnown RBP11.31□□□□□ -0.6
C9orf78-201ENST00000372447 CIDEAO60543 219 aa11.31□□□□□ -0.6
C9orf78-201ENST00000372447 TMEM170BQ5T4T1 132 aa11.31□□□□□ -0.6
C9orf78-201ENST00000372447 SLC25A29Q8N8R3 303 aa11.31□□□□□ -0.6
C9orf78-201ENST00000372447 FAM104AQ969W3 186 aa11.31□□□□□ -0.6
C9orf78-201ENST00000372447 AMELXQ99217 191 aa11.31□□□□□ -0.6
C9orf78-201ENST00000372447 SPANXA1Q9NS26 97 aa11.31□□□□□ -0.6
C9orf78-201ENST00000372447 UBE2D4Q9Y2X8 147 aa11.31□□□□□ -0.6
C9orf78-201ENST00000372447 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.3□□□□□ -0.6
C9orf78-201ENST00000372447 IGKV2-29A2NJV5 120 aaPredicted RBP11.3□□□□□ -0.6
C9orf78-201ENST00000372447 A6NDN8 102 aa11.3□□□□□ -0.6
C9orf78-201ENST00000372447 CEMP1Q6PRD7 247 aaPredicted RBP11.29□□□□□ -0.6
C9orf78-201ENST00000372447 DAZ4Q86SG3 579 aaKnown RBP11.28□□□□□ -0.6
C9orf78-201ENST00000372447 DAZ3Q9NR90 486 aaKnown RBP11.28□□□□□ -0.6
C9orf78-201ENST00000372447 CELA1Q9UNI1 258 aa11.28□□□□□ -0.6
C9orf78-201ENST00000372447 A0A0J9YXV3 536 aa11.27□□□□□ -0.61
C9orf78-201ENST00000372447 ZNF815PA8K554 130 aa11.27□□□□□ -0.61
C9orf78-201ENST00000372447 GCSHP23434 173 aa11.27□□□□□ -0.61
C9orf78-201ENST00000372447 UBE2D3P61077 147 aa11.27□□□□□ -0.61
C9orf78-201ENST00000372447 UBE2D2P62837 147 aa11.27□□□□□ -0.61
C9orf78-201ENST00000372447 TRBV6-4A0A1B0GX49 114 aa11.26□□□□□ -0.61
C9orf78-201ENST00000372447 GAGE12JA6NER3 117 aa11.26□□□□□ -0.61
C9orf78-201ENST00000372447 GAGE4Q13068 117 aa11.26□□□□□ -0.61
C9orf78-201ENST00000372447 GAGE5Q13069 117 aa11.26□□□□□ -0.61
C9orf78-201ENST00000372447 TAL2Q16559 108 aa11.26□□□□□ -0.61
C9orf78-201ENST00000372447 GAGE13Q4V321 117 aa11.26□□□□□ -0.61
C9orf78-201ENST00000372447 FAM222AQ5U5X8 452 aa11.26□□□□□ -0.61
C9orf78-201ENST00000372447 CEND1Q8N111 149 aa11.26□□□□□ -0.61
C9orf78-201ENST00000372447 ZNF22P17026 224 aaPredicted RBP11.26□□□□□ -0.61
C9orf78-201ENST00000372447 C11orf45Q8TAV5 145 aa11.26□□□□□ -0.61
C9orf78-201ENST00000372447 TM2D2Q9BX73 214 aa11.26□□□□□ -0.61
C9orf78-201ENST00000372447 TRGV4A0A0C4DH28 118 aa11.25□□□□□ -0.61
C9orf78-201ENST00000372447 TMEM223A0PJW6 202 aa11.25□□□□□ -0.61
C9orf78-201ENST00000372447 H3BRM9 83 aa11.25□□□□□ -0.61
C9orf78-201ENST00000372447 SPART-AS1P0CW21 52 aa11.25□□□□□ -0.61
C9orf78-201ENST00000372447 FXYD2P54710 66 aa11.25□□□□□ -0.61
C9orf78-201ENST00000372447 MRPS36P82909 103 aaKnown RBP11.25□□□□□ -0.61
C9orf78-201ENST00000372447 RNASE13Q5GAN3 156 aaKnown RBP11.25□□□□□ -0.61
C9orf78-201ENST00000372447 TIMM21Q9BVV7 248 aa11.25□□□□□ -0.61
C9orf78-201ENST00000372447 Q6ZUT4 128 aa11.24□□□□□ -0.61
C9orf78-201ENST00000372447 LYRM9A8MSI8 78 aa11.23□□□□□ -0.61
C9orf78-201ENST00000372447 NANOS2P60321 138 aaKnown RBP11.23□□□□□ -0.61
C9orf78-201ENST00000372447 NTM-AS1Q6ZSK4 140 aa11.23□□□□□ -0.61
C9orf78-201ENST00000372447 HIST1H4GQ99525 98 aa11.23□□□□□ -0.61
C9orf78-201ENST00000372447 DNAH7Q8WXX0 4024 aa11.23□□□□□ -0.61
C9orf78-201ENST00000372447 K7EP13 123 aa11.23□□□□□ -0.61
C9orf78-201ENST00000372447 TSPEAR-AS2P59090 65 aa11.23□□□□□ -0.61
C9orf78-201ENST00000372447 FHL2Q14192 279 aa11.23□□□□□ -0.61
C9orf78-201ENST00000372447 C12orf74Q32Q52 190 aa11.23□□□□□ -0.61
C9orf78-201ENST00000372447 SCGB1D4Q6XE38 83 aa11.23□□□□□ -0.61
C9orf78-201ENST00000372447 LINC00612Q8N6U2 182 aa11.23□□□□□ -0.61
C9orf78-201ENST00000372447 WWC2-AS2Q96NR7 200 aa11.23□□□□□ -0.61
C9orf78-201ENST00000372447 J3QQQ9 107 aa11.22□□□□□ -0.61
C9orf78-201ENST00000372447 LEPROTO15243 131 aa11.22□□□□□ -0.61
C9orf78-201ENST00000372447 DEFB130BP0DP73 79 aa11.22□□□□□ -0.61
C9orf78-201ENST00000372447 DEFB130AP0DP74 79 aa11.22□□□□□ -0.61
C9orf78-201ENST00000372447 PTTG1IPP53801 180 aa11.22□□□□□ -0.61
C9orf78-201ENST00000372447 VAMP3Q15836 100 aa11.22□□□□□ -0.61
C9orf78-201ENST00000372447 DGAT2L7PQ6IED9 249 aa11.22□□□□□ -0.61
C9orf78-201ENST00000372447 PLEKHB2Q96CS7 222 aa11.22□□□□□ -0.61
C9orf78-201ENST00000372447 GTSF1LQ9H1H1 148 aa11.22□□□□□ -0.61
C9orf78-201ENST00000372447 LOC100131303A0A0U1RQF7 123 aa11.21□□□□□ -0.61
C9orf78-201ENST00000372447 TEX48A0A1B0GUV7 120 aa11.21□□□□□ -0.61
C9orf78-201ENST00000372447 TINCRA0A1B0GVN0 87 aa11.21□□□□□ -0.61
C9orf78-201ENST00000372447 LGALS3P17931 250 aaKnown RBP11.21□□□□□ -0.61
C9orf78-201ENST00000372447 C9orf118A6NHY6 69 aa11.21□□□□□ -0.62
C9orf78-201ENST00000372447 SMIM13P0DJ93 91 aa11.21□□□□□ -0.62
C9orf78-201ENST00000372447 UBE2V1Q13404 147 aa11.21□□□□□ -0.62
C9orf78-201ENST00000372447 LINC00694P0DN24 101 aa11.2□□□□□ -0.62
C9orf78-201ENST00000372447 DAD1P61803 113 aa11.2□□□□□ -0.62
C9orf78-201ENST00000372447 Q6ZTC4 211 aa11.2□□□□□ -0.62
C9orf78-201ENST00000372447 CSDC2Q9Y534 153 aaKnown RBP11.2□□□□□ -0.62
C9orf78-201ENST00000372447 UBE2D1P51668 147 aa11.19□□□□□ -0.62
C9orf78-201ENST00000372447 RAB37Q96AX2 223 aa11.19□□□□□ -0.62
C9orf78-201ENST00000372447 IGHV3-64A0A075B6Q5 118 aa11.18□□□□□ -0.62
C9orf78-201ENST00000372447 A0A0J9YY99 117 aa11.18□□□□□ -0.62
C9orf78-201ENST00000372447 SMAGPQ0VAQ4 97 aa11.18□□□□□ -0.62
C9orf78-201ENST00000372447 NHP2Q9NX24 153 aaKnown RBP11.18□□□□□ -0.62
C9orf78-201ENST00000372447 CCL25O15444 150 aa11.18□□□□□ -0.62
C9orf78-201ENST00000372447 AMMECR1LQ6DCA0 310 aa11.18□□□□□ -0.62
C9orf78-201ENST00000372447 TMEM243Q9BU79 118 aa11.18□□□□□ -0.62
C9orf78-201ENST00000372447 CSMD3Q7Z407 3707 aa11.17□□□□□ -0.62
C9orf78-201ENST00000372447 MUC7Q8TAX7 377 aa11.17□□□□□ -0.62
C9orf78-201ENST00000372447 H3BUT2 72 aa11.16□□□□□ -0.62
C9orf78-201ENST00000372447 UBE2L6O14933 153 aa11.16□□□□□ -0.62
C9orf78-201ENST00000372447 TIRAPP58753 221 aa11.16□□□□□ -0.62
C9orf78-201ENST00000372447 SRSF9Q13242 221 aaKnown RBP eCLIP11.16□□□□□ -0.62
C9orf78-201ENST00000372447 GEMIN7Q9H840 131 aaKnown RBP11.16□□□□□ -0.62
C9orf78-201ENST00000372447 K7ERJ3 54 aa11.16□□□□□ -0.62
C9orf78-201ENST00000372447 IGHV3-30-3P0DP02 117 aa11.16□□□□□ -0.62
C9orf78-201ENST00000372447 OR5A1Q8NGJ0 315 aa11.16□□□□□ -0.62
C9orf78-201ENST00000372447 IGHV1-58A0A0C4DH39 117 aa11.15□□□□□ -0.62
C9orf78-201ENST00000372447 H7C423 109 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms