RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 IGKV2-28A0A075B6P5 120 aa17.74■□□□□ 0.43
RAPGEF1-203ENST00000372195 IGKV2D-28P01615 120 aa17.74■□□□□ 0.43
RAPGEF1-203ENST00000372195 SNURFQ9Y675 71 aa17.74■□□□□ 0.43
RAPGEF1-203ENST00000372195 RBX1P62877 108 aa17.73■□□□□ 0.43
RAPGEF1-203ENST00000372195 Q6ZSV7 163 aa17.73■□□□□ 0.43
RAPGEF1-203ENST00000372195 TNCP24821 2201 aa17.73■□□□□ 0.43
RAPGEF1-203ENST00000372195 ZFHX2Q9C0A1 2572 aaPredicted RBP17.72■□□□□ 0.43
RAPGEF1-203ENST00000372195 TSHBP01222 138 aa17.72■□□□□ 0.43
RAPGEF1-203ENST00000372195 NRACQ8N912 160 aa17.71■□□□□ 0.43
RAPGEF1-203ENST00000372195 LYRM9A8MSI8 78 aa17.71■□□□□ 0.43
RAPGEF1-203ENST00000372195 RNASE3P12724 160 aaKnown RBP17.71■□□□□ 0.43
RAPGEF1-203ENST00000372195 PDE6GP18545 87 aa17.71■□□□□ 0.43
RAPGEF1-203ENST00000372195 C6orf99Q4VX62 202 aa17.7■□□□□ 0.42
RAPGEF1-203ENST00000372195 C1orf158Q8N1D5 194 aa17.7■□□□□ 0.42
RAPGEF1-203ENST00000372195 HRCT1Q6UXD1 115 aa17.7■□□□□ 0.42
RAPGEF1-203ENST00000372195 SEC61GP60059 68 aa17.69■□□□□ 0.42
RAPGEF1-203ENST00000372195 EDN2P20800 178 aa17.69■□□□□ 0.42
RAPGEF1-203ENST00000372195 TRBV30A0A0K0K1B3 111 aa17.69■□□□□ 0.42
RAPGEF1-203ENST00000372195 C11orf71Q6IPW1 123 aa17.69■□□□□ 0.42
RAPGEF1-203ENST00000372195 PPDPFQ9H3Y8 114 aa17.68■□□□□ 0.42
RAPGEF1-203ENST00000372195 CCDC179H3BU77 68 aa17.68■□□□□ 0.42
RAPGEF1-203ENST00000372195 COL4A4P53420 1690 aaPredicted RBP17.67■□□□□ 0.42
RAPGEF1-203ENST00000372195 IBA57-AS1B1ANH7 110 aa17.67■□□□□ 0.42
RAPGEF1-203ENST00000372195 H7C423 109 aa17.67■□□□□ 0.42
RAPGEF1-203ENST00000372195 EBI3Q14213 229 aa17.66■□□□□ 0.42
RAPGEF1-203ENST00000372195 ZNF702PQ9H963 129 aa17.65■□□□□ 0.42
RAPGEF1-203ENST00000372195 IGLV2-18A0A075B6J9 118 aa17.65■□□□□ 0.42
RAPGEF1-203ENST00000372195 TRBV6-5A0A0K0K1A5 114 aa17.64■□□□□ 0.41
RAPGEF1-203ENST00000372195 RPL37AP8A6NKH3 93 aa17.62■□□□□ 0.41
RAPGEF1-203ENST00000372195 TECTAO75443 2155 aa17.62■□□□□ 0.41
RAPGEF1-203ENST00000372195 SMIM9A6NGZ8 99 aa17.62■□□□□ 0.41
RAPGEF1-203ENST00000372195 CCKP06307 115 aa17.62■□□□□ 0.41
RAPGEF1-203ENST00000372195 UBE2D4Q9Y2X8 147 aa17.62■□□□□ 0.41
RAPGEF1-203ENST00000372195 PRR4Q16378 134 aa17.62■□□□□ 0.41
RAPGEF1-203ENST00000372195 M0R2N4 97 aa17.61■□□□□ 0.41
RAPGEF1-203ENST00000372195 TRBV27A0A0K0K1C4 114 aa17.61■□□□□ 0.41
RAPGEF1-203ENST00000372195 HILS1P60008 231 aa17.61■□□□□ 0.41
RAPGEF1-203ENST00000372195 CLUHP3Q96NS8 147 aa17.61■□□□□ 0.41
RAPGEF1-203ENST00000372195 CREBBPQ92793 2442 aa17.61■□□□□ 0.41
RAPGEF1-203ENST00000372195 LRRC75A-AS1Q8N1F1 130 aa17.61■□□□□ 0.41
RAPGEF1-203ENST00000372195 USP17L23D6RBM5 183 aa17.6■□□□□ 0.41
RAPGEF1-203ENST00000372195 TRBV6-4A0A1B0GX49 114 aa17.6■□□□□ 0.41
RAPGEF1-203ENST00000372195 CASC2Q6XLA1 102 aa17.6■□□□□ 0.41
RAPGEF1-203ENST00000372195 NDUFC2-KCTD14E9PQ53 114 aa17.6■□□□□ 0.41
RAPGEF1-203ENST00000372195 C14orf177Q52M58 125 aa17.59■□□□□ 0.41
RAPGEF1-203ENST00000372195 SMIM11BQ8TCY0 68 aa17.59■□□□□ 0.41
RAPGEF1-203ENST00000372195 CEP192Q8TEP8 1941 aa17.59■□□□□ 0.41
RAPGEF1-203ENST00000372195 XGP55808 180 aa17.58■□□□□ 0.4
RAPGEF1-203ENST00000372195 CDSNQ15517 529 aa17.57■□□□□ 0.4
RAPGEF1-203ENST00000372195 NDUFA7O95182 113 aa17.56■□□□□ 0.4
RAPGEF1-203ENST00000372195 SYCNQ0VAF6 134 aa17.56■□□□□ 0.4
RAPGEF1-203ENST00000372195 LY6G6DO95868 133 aa17.56■□□□□ 0.4
RAPGEF1-203ENST00000372195 Q8N6K4 173 aa17.55■□□□□ 0.4
RAPGEF1-203ENST00000372195 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.55■□□□□ 0.4
RAPGEF1-203ENST00000372195 WFDC13Q8IUB5 93 aa17.55■□□□□ 0.4
RAPGEF1-203ENST00000372195 LINC00959A0A1B0GUT2 108 aa17.55■□□□□ 0.4
RAPGEF1-203ENST00000372195 HCFC1P51610 2035 aa17.55■□□□□ 0.4
RAPGEF1-203ENST00000372195 SPINK6Q6UWN8 80 aa17.55■□□□□ 0.4
RAPGEF1-203ENST00000372195 Q6ZQY7 126 aa17.55■□□□□ 0.4
RAPGEF1-203ENST00000372195 CRIP2P52943 208 aaPredicted RBP17.54■□□□□ 0.4
RAPGEF1-203ENST00000372195 POM121L12Q8N7R1 296 aa17.54■□□□□ 0.4
RAPGEF1-203ENST00000372195 UBE2D1P51668 147 aa17.54■□□□□ 0.4
RAPGEF1-203ENST00000372195 FAM30AQ9NZY2 134 aa17.53■□□□□ 0.4
RAPGEF1-203ENST00000372195 MIFP14174 115 aa17.53■□□□□ 0.4
RAPGEF1-203ENST00000372195 PYGO1Q9Y3Y4 419 aa17.53■□□□□ 0.4
RAPGEF1-203ENST00000372195 ZNF843Q8N446 348 aa17.52■□□□□ 0.4
RAPGEF1-203ENST00000372195 PSMG3-AS1Q96PY0 264 aa17.52■□□□□ 0.4
RAPGEF1-203ENST00000372195 ATP5EP2Q5VTU8 51 aa17.52■□□□□ 0.4
RAPGEF1-203ENST00000372195 FAM240AA0A1B0GVK7 77 aa17.51■□□□□ 0.39
RAPGEF1-203ENST00000372195 LST1O00453 97 aa17.5■□□□□ 0.39
RAPGEF1-203ENST00000372195 DSCAMO60469 2012 aa17.5■□□□□ 0.39
RAPGEF1-203ENST00000372195 ATG2AQ2TAZ0 1938 aa17.5■□□□□ 0.39
RAPGEF1-203ENST00000372195 KLLNB2CW77 178 aa17.5■□□□□ 0.39
RAPGEF1-203ENST00000372195 KPRPQ5T749 579 aaPredicted RBP17.49■□□□□ 0.39
RAPGEF1-203ENST00000372195 C9orf85Q96MD7 179 aa17.49■□□□□ 0.39
RAPGEF1-203ENST00000372195 FSTL3O95633 263 aa17.49■□□□□ 0.39
RAPGEF1-203ENST00000372195 CD164L2Q6UWJ8 174 aa17.49■□□□□ 0.39
RAPGEF1-203ENST00000372195 LINC01006Q8NI28 216 aa17.49■□□□□ 0.39
RAPGEF1-203ENST00000372195 LINC00310P59036 64 aa17.48■□□□□ 0.39
RAPGEF1-203ENST00000372195 PRR14LQ5THK1 2151 aa17.48■□□□□ 0.39
RAPGEF1-203ENST00000372195 SERP2Q8N6R1 65 aa17.48■□□□□ 0.39
RAPGEF1-203ENST00000372195 POLR2KP53803 58 aaKnown RBP17.47■□□□□ 0.39
RAPGEF1-203ENST00000372195 IGLV9-49A0A0B4J1Y8 123 aa17.46■□□□□ 0.39
RAPGEF1-203ENST00000372195 IGHV4-30-4P0DP06 118 aa17.46■□□□□ 0.39
RAPGEF1-203ENST00000372195 LINC00694P0DN24 101 aa17.46■□□□□ 0.39
RAPGEF1-203ENST00000372195 URB1-AS1Q96HZ7 61 aa17.45■□□□□ 0.38
RAPGEF1-203ENST00000372195 FAM208BQ5VWN6 2430 aa17.45■□□□□ 0.38
RAPGEF1-203ENST00000372195 MRPL55Q7Z7F7 128 aaKnown RBP17.45■□□□□ 0.38
RAPGEF1-203ENST00000372195 NANOS2P60321 138 aaKnown RBP17.44■□□□□ 0.38
RAPGEF1-203ENST00000372195 IGLV1-40P01703 118 aa17.44■□□□□ 0.38
RAPGEF1-203ENST00000372195 MUC22E2RYF6 1773 aaPredicted RBP17.44■□□□□ 0.38
RAPGEF1-203ENST00000372195 PLXNB1O43157 2135 aa17.44■□□□□ 0.38
RAPGEF1-203ENST00000372195 COX6A2Q02221 97 aa17.44■□□□□ 0.38
RAPGEF1-203ENST00000372195 C9orf116Q5BN46 136 aaPredicted RBP17.44■□□□□ 0.38
RAPGEF1-203ENST00000372195 TIMM17BO60830 172 aa17.43■□□□□ 0.38
RAPGEF1-203ENST00000372195 AVPP01185 164 aa17.43■□□□□ 0.38
RAPGEF1-203ENST00000372195 SMR3AQ99954 134 aa17.43■□□□□ 0.38
RAPGEF1-203ENST00000372195 M0R378 163 aa17.42■□□□□ 0.38
RAPGEF1-203ENST00000372195 IGLV4-69A0A075B6H9 119 aa17.41■□□□□ 0.38
RAPGEF1-203ENST00000372195 PRR3P79522 188 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms