RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 RBMY1DP0C7P1 496 aaKnown RBP12.51□□□□□ -0.41
VEGFA-205ENST00000372067 NTN5Q8WTR8 489 aaPredicted RBP12.51□□□□□ -0.41
VEGFA-205ENST00000372067 C11orf86A6NJI1 115 aa12.5□□□□□ -0.41
VEGFA-205ENST00000372067 M0R2P5 195 aa12.5□□□□□ -0.41
VEGFA-205ENST00000372067 LINC01546A6NGU7 62 aa12.5□□□□□ -0.41
VEGFA-205ENST00000372067 NDUFA7O95182 113 aa12.5□□□□□ -0.41
VEGFA-205ENST00000372067 PF4P02776 101 aa12.5□□□□□ -0.41
VEGFA-205ENST00000372067 POLR2KP53803 58 aaKnown RBP12.5□□□□□ -0.41
VEGFA-205ENST00000372067 TMEM86BQ8N661 226 aa12.5□□□□□ -0.41
VEGFA-205ENST00000372067 PLEKHB2Q96CS7 222 aa12.5□□□□□ -0.41
VEGFA-205ENST00000372067 TRAV12-1A0A0B4J245 112 aa12.5□□□□□ -0.41
VEGFA-205ENST00000372067 LGALS3P17931 250 aaKnown RBP12.5□□□□□ -0.41
VEGFA-205ENST00000372067 F5H768 121 aa12.49□□□□□ -0.41
VEGFA-205ENST00000372067 SCGB1C2P0DMR2 95 aa12.49□□□□□ -0.41
VEGFA-205ENST00000372067 NF1P21359 2839 aa12.49□□□□□ -0.41
VEGFA-205ENST00000372067 NXPH4O95158 308 aa12.49□□□□□ -0.41
VEGFA-205ENST00000372067 NDUFA11Q86Y39 141 aa12.49□□□□□ -0.41
VEGFA-205ENST00000372067 RNF152Q8N8N0 203 aa12.49□□□□□ -0.41
VEGFA-205ENST00000372067 LINC01006Q8NI28 216 aa12.49□□□□□ -0.41
VEGFA-205ENST00000372067 ITPR2Q14571 2701 aa12.48□□□□□ -0.41
VEGFA-205ENST00000372067 J3KT08 172 aa12.48□□□□□ -0.41
VEGFA-205ENST00000372067 Q8N2B8 174 aa12.48□□□□□ -0.41
VEGFA-205ENST00000372067 WFDC10AQ9H1F0 79 aa12.48□□□□□ -0.41
VEGFA-205ENST00000372067 TMEM141Q96I45 108 aa12.47□□□□□ -0.41
VEGFA-205ENST00000372067 PAPPA-AS1Q5QFB9 102 aa12.47□□□□□ -0.41
VEGFA-205ENST00000372067 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.45□□□□□ -0.42
VEGFA-205ENST00000372067 IGKV2-29A2NJV5 120 aaPredicted RBP12.45□□□□□ -0.42
VEGFA-205ENST00000372067 C4orf26Q17RF5 130 aa12.45□□□□□ -0.42
VEGFA-205ENST00000372067 ODF3L2Q3SX64 289 aa12.45□□□□□ -0.42
VEGFA-205ENST00000372067 POM121L12Q8N7R1 296 aa12.45□□□□□ -0.42
VEGFA-205ENST00000372067 CYSTM1Q9H1C7 97 aa12.45□□□□□ -0.42
VEGFA-205ENST00000372067 TRGV2A0A075B6R0 118 aa12.45□□□□□ -0.42
VEGFA-205ENST00000372067 OXTP01178 125 aa12.45□□□□□ -0.42
VEGFA-205ENST00000372067 C9orf153Q5TBE3 101 aa12.45□□□□□ -0.42
VEGFA-205ENST00000372067 TRAV2A0A0B4J234 112 aa12.45□□□□□ -0.42
VEGFA-205ENST00000372067 A0A0J9YXV3 536 aa12.44□□□□□ -0.42
VEGFA-205ENST00000372067 TRBV27A0A0K0K1C4 114 aa12.44□□□□□ -0.42
VEGFA-205ENST00000372067 CFC1BP0CG36 223 aa12.44□□□□□ -0.42
VEGFA-205ENST00000372067 CFC1P0CG37 223 aa12.44□□□□□ -0.42
VEGFA-205ENST00000372067 TRAV8-4A0A0B4J246 113 aa12.44□□□□□ -0.42
VEGFA-205ENST00000372067 FAM236AA0A1B0GUQ0 79 aa12.44□□□□□ -0.42
VEGFA-205ENST00000372067 FAM236BA0A1B0GV22 79 aa12.44□□□□□ -0.42
VEGFA-205ENST00000372067 ZNRF2Q8NHG8 242 aa12.44□□□□□ -0.42
VEGFA-205ENST00000372067 RHOHQ15669 191 aa12.43□□□□□ -0.42
VEGFA-205ENST00000372067 EIF4EBP3O60516 100 aaPredicted RBP12.43□□□□□ -0.42
VEGFA-205ENST00000372067 H7C2G1 150 aa12.42□□□□□ -0.42
VEGFA-205ENST00000372067 C20orf203Q8NBC4 194 aa12.42□□□□□ -0.42
VEGFA-205ENST00000372067 KIR2DL5BQ8NHK3 375 aa12.42□□□□□ -0.42
VEGFA-205ENST00000372067 Q9UF83 564 aa12.42□□□□□ -0.42
VEGFA-205ENST00000372067 TSHBP01222 138 aa12.42□□□□□ -0.42
VEGFA-205ENST00000372067 NOP10Q9NPE3 64 aaKnown RBP12.42□□□□□ -0.42
VEGFA-205ENST00000372067 A0A1B0GX51 115 aa12.42□□□□□ -0.42
VEGFA-205ENST00000372067 TIMM17AQ99595 171 aa12.42□□□□□ -0.42
VEGFA-205ENST00000372067 TRBV6-5A0A0K0K1A5 114 aa12.41□□□□□ -0.42
VEGFA-205ENST00000372067 IGIPA6NJ69 53 aa12.41□□□□□ -0.42
VEGFA-205ENST00000372067 ADARB2-AS1A8MUL3 147 aa12.41□□□□□ -0.42
VEGFA-205ENST00000372067 PRSS2P07478 247 aa12.41□□□□□ -0.42
VEGFA-205ENST00000372067 C3orf22Q8N5N4 141 aa12.41□□□□□ -0.42
VEGFA-205ENST00000372067 UNC79Q9P2D8 2635 aa12.41□□□□□ -0.42
VEGFA-205ENST00000372067 IGKV3OR2-268A0A0C4DH90 116 aa12.41□□□□□ -0.42
VEGFA-205ENST00000372067 Q6ZSN1 163 aa12.4□□□□□ -0.42
VEGFA-205ENST00000372067 C10orf126Q8N4M7 172 aa12.4□□□□□ -0.42
VEGFA-205ENST00000372067 TRBV7-7A0A0K0K1E9 115 aa12.39□□□□□ -0.43
VEGFA-205ENST00000372067 HRCT1Q6UXD1 115 aa12.39□□□□□ -0.43
VEGFA-205ENST00000372067 J3QQQ9 107 aa12.38□□□□□ -0.43
VEGFA-205ENST00000372067 Q6ZTI0 123 aa12.38□□□□□ -0.43
VEGFA-205ENST00000372067 RNASE1P07998 156 aaKnown RBP12.38□□□□□ -0.43
VEGFA-205ENST00000372067 ZNF22P17026 224 aaPredicted RBP12.38□□□□□ -0.43
VEGFA-205ENST00000372067 RPL13AP40429 203 aaKnown RBP12.37□□□□□ -0.43
VEGFA-205ENST00000372067 Q1RN00 199 aa12.37□□□□□ -0.43
VEGFA-205ENST00000372067 LYRM7Q5U5X0 104 aa12.37□□□□□ -0.43
VEGFA-205ENST00000372067 Q5XG85 94 aa12.37□□□□□ -0.43
VEGFA-205ENST00000372067 OR13C6PQ8NH95 151 aa12.37□□□□□ -0.43
VEGFA-205ENST00000372067 IGLV4-69A0A075B6H9 119 aa12.36□□□□□ -0.43
VEGFA-205ENST00000372067 RPL36AP83881 106 aaKnown RBP12.36□□□□□ -0.43
VEGFA-205ENST00000372067 RPL36ALQ969Q0 106 aaKnown RBP12.36□□□□□ -0.43
VEGFA-205ENST00000372067 TRGV4A0A0C4DH28 118 aa12.36□□□□□ -0.43
VEGFA-205ENST00000372067 IGLV4-3A0A075B6K6 122 aa12.36□□□□□ -0.43
VEGFA-205ENST00000372067 NPC2P61916 151 aa12.36□□□□□ -0.43
VEGFA-205ENST00000372067 LINC00526Q96FQ7 95 aa12.36□□□□□ -0.43
VEGFA-205ENST00000372067 DEFB130BP0DP73 79 aa12.35□□□□□ -0.43
VEGFA-205ENST00000372067 DEFB130AP0DP74 79 aa12.35□□□□□ -0.43
VEGFA-205ENST00000372067 C1orf158Q8N1D5 194 aa12.35□□□□□ -0.43
VEGFA-205ENST00000372067 A0A0U1RRA0 63 aa12.34□□□□□ -0.43
VEGFA-205ENST00000372067 UBE2L6O14933 153 aa12.34□□□□□ -0.43
VEGFA-205ENST00000372067 RPS28P62857 69 aaKnown RBP12.34□□□□□ -0.43
VEGFA-205ENST00000372067 TIMM21Q9BVV7 248 aa12.34□□□□□ -0.43
VEGFA-205ENST00000372067 TRAV13-1A0A0B4J241 112 aa12.34□□□□□ -0.43
VEGFA-205ENST00000372067 UQCRQO14949 82 aa12.33□□□□□ -0.43
VEGFA-205ENST00000372067 LY6G6DO95868 133 aa12.33□□□□□ -0.43
VEGFA-205ENST00000372067 LINC00467Q9BRT7 94 aa12.33□□□□□ -0.43
VEGFA-205ENST00000372067 TRAV8-3A0A0A6YYJ7 113 aa12.33□□□□□ -0.44
VEGFA-205ENST00000372067 IGHV3-30P01768 117 aa12.33□□□□□ -0.44
VEGFA-205ENST00000372067 IGHV3-30-5P0DP03 117 aa12.33□□□□□ -0.44
VEGFA-205ENST00000372067 A0A0J9YY99 117 aa12.32□□□□□ -0.44
VEGFA-205ENST00000372067 INAFM1C9JVW0 142 aa12.32□□□□□ -0.44
VEGFA-205ENST00000372067 HILS1P60008 231 aa12.32□□□□□ -0.44
VEGFA-205ENST00000372067 CMC4P56277 68 aaPredicted RBP12.32□□□□□ -0.44
VEGFA-205ENST00000372067 KRTAP1-1Q07627 177 aa12.32□□□□□ -0.44
VEGFA-205ENST00000372067 PRO1854Q9UHT4 67 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms