RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 TRAV12-3A0A0B4J271 114 aa7.46□□□□□ -1.22
COL5A1-202ENST00000371820 LEPROTO15243 131 aa7.46□□□□□ -1.22
COL5A1-202ENST00000371820 MIFP14174 115 aa7.46□□□□□ -1.22
COL5A1-202ENST00000371820 LGALS3P17931 250 aaKnown RBP7.46□□□□□ -1.22
COL5A1-202ENST00000371820 TCTAP57738 103 aa7.46□□□□□ -1.22
COL5A1-202ENST00000371820 CEMP1Q6PRD7 247 aaPredicted RBP7.46□□□□□ -1.22
COL5A1-202ENST00000371820 C11orf45Q8TAV5 145 aa7.46□□□□□ -1.22
COL5A1-202ENST00000371820 LINC00467Q9BRT7 94 aa7.46□□□□□ -1.22
COL5A1-202ENST00000371820 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.45□□□□□ -1.22
COL5A1-202ENST00000371820 SLC25A29Q8N8R3 303 aa7.45□□□□□ -1.22
COL5A1-202ENST00000371820 CLUHP3Q96NS8 147 aa7.45□□□□□ -1.22
COL5A1-202ENST00000371820 SIGMAR1Q99720 223 aa7.45□□□□□ -1.22
COL5A1-202ENST00000371820 SPXQ9BT56 116 aa7.45□□□□□ -1.22
COL5A1-202ENST00000371820 A8MTW9 85 aa7.44□□□□□ -1.22
COL5A1-202ENST00000371820 F6UB75 175 aa7.44□□□□□ -1.22
COL5A1-202ENST00000371820 H3BMM0 161 aa7.44□□□□□ -1.22
COL5A1-202ENST00000371820 M0QY20 66 aa7.44□□□□□ -1.22
COL5A1-202ENST00000371820 RHODO00212 210 aa7.44□□□□□ -1.22
COL5A1-202ENST00000371820 CRYGDP07320 174 aa7.44□□□□□ -1.22
COL5A1-202ENST00000371820 UBE2D1P51668 147 aa7.44□□□□□ -1.22
COL5A1-202ENST00000371820 ZNF56Q15929 161 aa7.44□□□□□ -1.22
COL5A1-202ENST00000371820 C20orf203Q8NBC4 194 aa7.44□□□□□ -1.22
COL5A1-202ENST00000371820 MRPL16Q9NX20 251 aaKnown RBP7.44□□□□□ -1.22
COL5A1-202ENST00000371820 TMEM238C9JI98 176 aa7.43□□□□□ -1.22
COL5A1-202ENST00000371820 H3BMG7 143 aa7.43□□□□□ -1.22
COL5A1-202ENST00000371820 M0QXV9 152 aa7.43□□□□□ -1.22
COL5A1-202ENST00000371820 TMEM170BQ5T4T1 132 aa7.43□□□□□ -1.22
COL5A1-202ENST00000371820 Q6ZQT7 251 aa7.43□□□□□ -1.22
COL5A1-202ENST00000371820 MTURNQ8N3F0 131 aa7.43□□□□□ -1.22
COL5A1-202ENST00000371820 TNFRSF18Q9Y5U5 241 aa7.43□□□□□ -1.22
COL5A1-202ENST00000371820 A0A0J9YY99 117 aa7.42□□□□□ -1.22
COL5A1-202ENST00000371820 J3QQQ9 107 aa7.42□□□□□ -1.22
COL5A1-202ENST00000371820 LY6G6CO95867 125 aa7.42□□□□□ -1.22
COL5A1-202ENST00000371820 GIG44P09565 113 aaPredicted RBP7.42□□□□□ -1.22
COL5A1-202ENST00000371820 ZNF415Q09FC8 603 aa7.42□□□□□ -1.22
COL5A1-202ENST00000371820 Q8NAQ8 132 aa7.42□□□□□ -1.22
COL5A1-202ENST00000371820 COPS9Q8WXC6 57 aa7.42□□□□□ -1.22
COL5A1-202ENST00000371820 TTTY13Q9BZ97 58 aa7.42□□□□□ -1.22
COL5A1-202ENST00000371820 FRAS1Q86XX4 4008 aa7.41□□□□□ -1.22
COL5A1-202ENST00000371820 IGLV4-69A0A075B6H9 119 aa7.41□□□□□ -1.22
COL5A1-202ENST00000371820 IGHV4-28A0A0C4DH34 117 aa7.41□□□□□ -1.22
COL5A1-202ENST00000371820 SMIM9A6NGZ8 99 aa7.41□□□□□ -1.22
COL5A1-202ENST00000371820 M0R2P5 195 aa7.41□□□□□ -1.22
COL5A1-202ENST00000371820 NANOS2P60321 138 aaKnown RBP7.41□□□□□ -1.22
COL5A1-202ENST00000371820 CSNK1G2-AS1Q8NCQ2 148 aa7.41□□□□□ -1.22
COL5A1-202ENST00000371820 SPANXA1Q9NS26 97 aa7.41□□□□□ -1.22
COL5A1-202ENST00000371820 PGPEP1Q9NXJ5 209 aa7.41□□□□□ -1.22
COL5A1-202ENST00000371820 XCL2Q9UBD3 114 aa7.41□□□□□ -1.22
COL5A1-202ENST00000371820 PRO1854Q9UHT4 67 aa7.41□□□□□ -1.22
COL5A1-202ENST00000371820 A0A087WWL8 130 aa7.4□□□□□ -1.22
COL5A1-202ENST00000371820 TMEM223A0PJW6 202 aa7.4□□□□□ -1.22
COL5A1-202ENST00000371820 TMEM262E9PQX1 116 aa7.4□□□□□ -1.22
COL5A1-202ENST00000371820 DEFB4AO15263 64 aa7.4□□□□□ -1.22
COL5A1-202ENST00000371820 CIDEAO60543 219 aa7.4□□□□□ -1.22
COL5A1-202ENST00000371820 TSHBP01222 138 aa7.4□□□□□ -1.22
COL5A1-202ENST00000371820 IGKV3-20P01619 116 aa7.4□□□□□ -1.22
COL5A1-202ENST00000371820 NAA38Q9BRA0 125 aaKnown RBP7.4□□□□□ -1.22
COL5A1-202ENST00000371820 X6R8D5 127 aa7.4□□□□□ -1.22
COL5A1-202ENST00000371820 TRAV10A0A0B4J240 114 aa7.39□□□□□ -1.23
COL5A1-202ENST00000371820 A0A0B4J2C4 111 aa7.39□□□□□ -1.23
COL5A1-202ENST00000371820 TEX48A0A1B0GUV7 120 aa7.39□□□□□ -1.23
COL5A1-202ENST00000371820 IGHV3-30P01768 117 aa7.39□□□□□ -1.23
COL5A1-202ENST00000371820 RBMY1A1P0DJD3 496 aaKnown RBP7.39□□□□□ -1.23
COL5A1-202ENST00000371820 RBMY1CP0DJD4 496 aa7.39□□□□□ -1.23
COL5A1-202ENST00000371820 SCGB1C2P0DMR2 95 aa7.39□□□□□ -1.23
COL5A1-202ENST00000371820 IGHV3-30-5P0DP03 117 aa7.39□□□□□ -1.23
COL5A1-202ENST00000371820 UBE2D3P61077 147 aa7.39□□□□□ -1.23
COL5A1-202ENST00000371820 UBE2D2P62837 147 aa7.39□□□□□ -1.23
COL5A1-202ENST00000371820 RBMY1FQ15415 496 aaKnown RBP7.39□□□□□ -1.23
COL5A1-202ENST00000371820 FAM74A4Q5TZK3 123 aa7.39□□□□□ -1.23
COL5A1-202ENST00000371820 AMTNQ6UX39 209 aa7.39□□□□□ -1.23
COL5A1-202ENST00000371820 C10orf126Q8N4M7 172 aa7.39□□□□□ -1.23
COL5A1-202ENST00000371820 KMT2AQ03164 3969 aa7.39□□□□□ -1.23
COL5A1-202ENST00000371820 DNAH10Q8IVF4 4471 aa7.38□□□□□ -1.23
COL5A1-202ENST00000371820 LOC107984156A0A0G2JMH3 177 aa7.38□□□□□ -1.23
COL5A1-202ENST00000371820 TINCRA0A1B0GVN0 87 aa7.38□□□□□ -1.23
COL5A1-202ENST00000371820 GAGE12HA6NDE8 117 aa7.38□□□□□ -1.23
COL5A1-202ENST00000371820 K7ERJ3 54 aa7.38□□□□□ -1.23
COL5A1-202ENST00000371820 IFITM1P13164 125 aa7.38□□□□□ -1.23
COL5A1-202ENST00000371820 WFDC2Q14508 124 aa7.38□□□□□ -1.23
COL5A1-202ENST00000371820 SPINK13Q1W4C9 94 aa7.38□□□□□ -1.23
COL5A1-202ENST00000371820 ARL17AQ8IVW1 177 aa7.38□□□□□ -1.23
COL5A1-202ENST00000371820 AMELXQ99217 191 aa7.38□□□□□ -1.23
COL5A1-202ENST00000371820 TIMM21Q9BVV7 248 aa7.38□□□□□ -1.23
COL5A1-202ENST00000371820 ERG28Q9UKR5 140 aa7.38□□□□□ -1.23
COL5A1-202ENST00000371820 HERC2O95714 4834 aa7.38□□□□□ -1.23
COL5A1-202ENST00000371820 IGHV3OR16-12A0A075B7B8 117 aa7.37□□□□□ -1.23
COL5A1-202ENST00000371820 A0A0J9YXY3 114 aa7.37□□□□□ -1.23
COL5A1-202ENST00000371820 TIMM17BO60830 172 aa7.37□□□□□ -1.23
COL5A1-202ENST00000371820 COX6CP09669 75 aa7.37□□□□□ -1.23
COL5A1-202ENST00000371820 P0DMU3 169 aa7.37□□□□□ -1.23
COL5A1-202ENST00000371820 FAM231AP0DMU4 169 aa7.37□□□□□ -1.23
COL5A1-202ENST00000371820 FAM231CP0DMU5 169 aa7.37□□□□□ -1.23
COL5A1-202ENST00000371820 MRPS36P82909 103 aaKnown RBP7.37□□□□□ -1.23
COL5A1-202ENST00000371820 CIRBPQ14011 172 aaKnown RBP7.37□□□□□ -1.23
COL5A1-202ENST00000371820 PPDPFLQ8WWR9 84 aa7.37□□□□□ -1.23
COL5A1-202ENST00000371820 JPT2Q9H910 190 aa7.37□□□□□ -1.23
COL5A1-202ENST00000371820 AGRNO00468 2067 aa7.36□□□□□ -1.23
COL5A1-202ENST00000371820 IGLV4-3A0A075B6K6 122 aa7.36□□□□□ -1.23
COL5A1-202ENST00000371820 APOMO95445 188 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 364.4 ms