RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 LINC01620Q4KN68 170 aa9.33□□□□□ -0.92
GPC3-201ENST00000370818 NOTCH2Q04721 2471 aa9.33□□□□□ -0.92
GPC3-201ENST00000370818 M0QY20 66 aa9.32□□□□□ -0.92
GPC3-201ENST00000370818 A4D1N5 150 aa9.32□□□□□ -0.92
GPC3-201ENST00000370818 NDUFA7O95182 113 aa9.32□□□□□ -0.92
GPC3-201ENST00000370818 PROK1P58294 105 aa9.32□□□□□ -0.92
GPC3-201ENST00000370818 TSPEAR-AS2P59090 65 aa9.32□□□□□ -0.92
GPC3-201ENST00000370818 TMEM263Q8WUH6 116 aaKnown RBP9.32□□□□□ -0.92
GPC3-201ENST00000370818 OTOGQ6ZRI0 2925 aa9.32□□□□□ -0.92
GPC3-201ENST00000370818 IGLV4-69A0A075B6H9 119 aa9.31□□□□□ -0.92
GPC3-201ENST00000370818 ZNF56Q15929 161 aa9.31□□□□□ -0.92
GPC3-201ENST00000370818 MRPL23Q16540 153 aaKnown RBP9.31□□□□□ -0.92
GPC3-201ENST00000370818 TRBV6-5A0A0K0K1A5 114 aa9.31□□□□□ -0.92
GPC3-201ENST00000370818 SDHAF1A6NFY7 115 aa9.31□□□□□ -0.92
GPC3-201ENST00000370818 ATXN8Q156A1 80 aa9.31□□□□□ -0.92
GPC3-201ENST00000370818 DEFB104AQ8WTQ1 72 aa9.31□□□□□ -0.92
GPC3-201ENST00000370818 AMELXQ99217 191 aa9.31□□□□□ -0.92
GPC3-201ENST00000370818 TRBV10-2A0A0K0K1G8 114 aa9.3□□□□□ -0.92
GPC3-201ENST00000370818 H7C2G1 150 aa9.3□□□□□ -0.92
GPC3-201ENST00000370818 EMP1P54849 157 aa9.3□□□□□ -0.92
GPC3-201ENST00000370818 HERVK_113P61574 105 aa9.3□□□□□ -0.92
GPC3-201ENST00000370818 CSDC2Q9Y534 153 aaKnown RBP9.3□□□□□ -0.92
GPC3-201ENST00000370818 NIPBLQ6KC79 2804 aaeCLIP9.3□□□□□ -0.92
GPC3-201ENST00000370818 TRBV27A0A0K0K1C4 114 aa9.29□□□□□ -0.92
GPC3-201ENST00000370818 VCYO14598 125 aa9.29□□□□□ -0.92
GPC3-201ENST00000370818 TSHBP01222 138 aa9.29□□□□□ -0.92
GPC3-201ENST00000370818 LINC00694P0DN24 101 aa9.29□□□□□ -0.92
GPC3-201ENST00000370818 C11orf72Q8NBR9 251 aa9.29□□□□□ -0.92
GPC3-201ENST00000370818 UBE2WQ96B02 151 aa9.29□□□□□ -0.92
GPC3-201ENST00000370818 LINC00467Q9BRT7 94 aa9.29□□□□□ -0.92
GPC3-201ENST00000370818 INSP01308 110 aa9.28□□□□□ -0.92
GPC3-201ENST00000370818 PAPPA-AS1Q5QFB9 102 aa9.28□□□□□ -0.92
GPC3-201ENST00000370818 DNAJC30Q96LL9 226 aa9.28□□□□□ -0.92
GPC3-201ENST00000370818 XCL2Q9UBD3 114 aa9.28□□□□□ -0.92
GPC3-201ENST00000370818 SETXQ7Z333 2677 aaKnown RBP9.28□□□□□ -0.92
GPC3-201ENST00000370818 A0A0B4J2C4 111 aa9.28□□□□□ -0.92
GPC3-201ENST00000370818 M0R2P5 195 aa9.28□□□□□ -0.92
GPC3-201ENST00000370818 KRTAP10-3P60369 221 aa9.28□□□□□ -0.92
GPC3-201ENST00000370818 STHQ8IWL8 128 aa9.28□□□□□ -0.92
GPC3-201ENST00000370818 NSUN5P1Q3KNT7 163 aa9.27□□□□□ -0.92
GPC3-201ENST00000370818 TRBV7-7A0A0K0K1E9 115 aa9.27□□□□□ -0.93
GPC3-201ENST00000370818 IGLV1-51P01701 117 aa9.27□□□□□ -0.93
GPC3-201ENST00000370818 ZNF415Q09FC8 603 aa9.27□□□□□ -0.93
GPC3-201ENST00000370818 C5orf47Q569G3 176 aa9.26□□□□□ -0.93
GPC3-201ENST00000370818 TP53TG1Q9Y2A0 90 aa9.26□□□□□ -0.93
GPC3-201ENST00000370818 IGHV3-73A0A0B4J1V6 119 aa9.26□□□□□ -0.93
GPC3-201ENST00000370818 IGIPA6NJ69 53 aa9.26□□□□□ -0.93
GPC3-201ENST00000370818 J3QQQ9 107 aa9.26□□□□□ -0.93
GPC3-201ENST00000370818 RPL39P62891 51 aaKnown RBP9.26□□□□□ -0.93
GPC3-201ENST00000370818 PIK3CD-AS1Q5SR53 167 aa9.26□□□□□ -0.93
GPC3-201ENST00000370818 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
GPC3-201ENST00000370818 MUSTN1Q8IVN3 82 aa9.26□□□□□ -0.93
GPC3-201ENST00000370818 C1orf158Q8N1D5 194 aa9.26□□□□□ -0.93
GPC3-201ENST00000370818 PMVKQ15126 192 aa9.25□□□□□ -0.93
GPC3-201ENST00000370818 TMEM170BQ5T4T1 132 aa9.25□□□□□ -0.93
GPC3-201ENST00000370818 ZNRF2Q8NHG8 242 aa9.25□□□□□ -0.93
GPC3-201ENST00000370818 EDA2RQ9HAV5 297 aa9.25□□□□□ -0.93
GPC3-201ENST00000370818 TRBV30A0A0K0K1B3 111 aa9.25□□□□□ -0.93
GPC3-201ENST00000370818 LOC107984640A0A0U1RRK4 108 aa9.25□□□□□ -0.93
GPC3-201ENST00000370818 FAM240AA0A1B0GVK7 77 aa9.25□□□□□ -0.93
GPC3-201ENST00000370818 INAFM1C9JVW0 142 aa9.25□□□□□ -0.93
GPC3-201ENST00000370818 H7C423 109 aa9.25□□□□□ -0.93
GPC3-201ENST00000370818 Q1RN00 199 aa9.25□□□□□ -0.93
GPC3-201ENST00000370818 C19orf73Q9NVV2 129 aa9.24□□□□□ -0.93
GPC3-201ENST00000370818 TRIAP1O43715 76 aa9.24□□□□□ -0.93
GPC3-201ENST00000370818 DEFB121Q5J5C9 76 aa9.24□□□□□ -0.93
GPC3-201ENST00000370818 WFDC10AQ9H1F0 79 aa9.24□□□□□ -0.93
GPC3-201ENST00000370818 GIG44P09565 113 aaPredicted RBP9.23□□□□□ -0.93
GPC3-201ENST00000370818 LGALS3P17931 250 aaKnown RBP9.23□□□□□ -0.93
GPC3-201ENST00000370818 Q6ZSN1 163 aa9.23□□□□□ -0.93
GPC3-201ENST00000370818 Q9UF83 564 aa9.23□□□□□ -0.93
GPC3-201ENST00000370818 IGHV3OR16-12A0A075B7B8 117 aa9.23□□□□□ -0.93
GPC3-201ENST00000370818 BEAN1Q3B7T3 259 aa9.23□□□□□ -0.93
GPC3-201ENST00000370818 SPXQ9BT56 116 aa9.23□□□□□ -0.93
GPC3-201ENST00000370818 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.22□□□□□ -0.93
GPC3-201ENST00000370818 FAM236AA0A1B0GUQ0 79 aa9.22□□□□□ -0.93
GPC3-201ENST00000370818 FAM236BA0A1B0GV22 79 aa9.22□□□□□ -0.93
GPC3-201ENST00000370818 I3L3M4 83 aa9.22□□□□□ -0.93
GPC3-201ENST00000370818 RHOHQ15669 191 aa9.22□□□□□ -0.93
GPC3-201ENST00000370818 CEMP1Q6PRD7 247 aaPredicted RBP9.22□□□□□ -0.93
GPC3-201ENST00000370818 TIMM17AQ99595 171 aa9.22□□□□□ -0.93
GPC3-201ENST00000370818 JMJD1CQ15652 2540 aa9.22□□□□□ -0.93
GPC3-201ENST00000370818 NACAE9PAV3 2078 aa9.22□□□□□ -0.93
GPC3-201ENST00000370818 H3BT86 120 aa9.21□□□□□ -0.93
GPC3-201ENST00000370818 ZNF22P17026 224 aaPredicted RBP9.21□□□□□ -0.93
GPC3-201ENST00000370818 C3orf22Q8N5N4 141 aa9.21□□□□□ -0.93
GPC3-201ENST00000370818 IL17DQ8TAD2 202 aa9.21□□□□□ -0.93
GPC3-201ENST00000370818 TMEM101Q96IK0 257 aa9.21□□□□□ -0.93
GPC3-201ENST00000370818 SMIM9A6NGZ8 99 aa9.21□□□□□ -0.94
GPC3-201ENST00000370818 CMC4P56277 68 aaPredicted RBP9.21□□□□□ -0.94
GPC3-201ENST00000370818 C9orf153Q5TBE3 101 aa9.21□□□□□ -0.94
GPC3-201ENST00000370818 TMEM141Q96I45 108 aa9.21□□□□□ -0.94
GPC3-201ENST00000370818 FN1P02751 2386 aaKnown RBP9.21□□□□□ -0.94
GPC3-201ENST00000370818 HERVK_113P63121 156 aa9.2□□□□□ -0.94
GPC3-201ENST00000370818 IMUPQ9GZP8 106 aa9.2□□□□□ -0.94
GPC3-201ENST00000370818 NSD1Q96L73 2696 aaPredicted RBP9.2□□□□□ -0.94
GPC3-201ENST00000370818 TMEM223A0PJW6 202 aa9.2□□□□□ -0.94
GPC3-201ENST00000370818 RS1O15537 224 aa9.19□□□□□ -0.94
GPC3-201ENST00000370818 C20orf203Q8NBC4 194 aa9.19□□□□□ -0.94
GPC3-201ENST00000370818 C2CD3Q4AC94 2353 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms