RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 PRIMA1Q86XR5 153 aa12.24□□□□□ -0.45
DKC1-201ENST00000369550 IGLV5-45A0A087WSX0 123 aa12.24□□□□□ -0.45
DKC1-201ENST00000369550 COX7CP15954 63 aa12.23□□□□□ -0.45
DKC1-201ENST00000369550 SYNJ2BPP57105 145 aa12.23□□□□□ -0.45
DKC1-201ENST00000369550 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.23□□□□□ -0.451e-7■■■■■ 30.4
DKC1-201ENST00000369550 BEAN1Q3B7T3 259 aa12.23□□□□□ -0.45
DKC1-201ENST00000369550 FAM218AQ96MZ4 157 aa12.23□□□□□ -0.45
DKC1-201ENST00000369550 Q9HAA7 133 aa12.23□□□□□ -0.45
DKC1-201ENST00000369550 CSDC2Q9Y534 153 aaKnown RBP12.23□□□□□ -0.45
DKC1-201ENST00000369550 SDIM1Q6ZPB5 146 aa12.22□□□□□ -0.45
DKC1-201ENST00000369550 C5orf38Q86SI9 138 aa12.22□□□□□ -0.45
DKC1-201ENST00000369550 J3KT08 172 aa12.22□□□□□ -0.45
DKC1-201ENST00000369550 CFHR3Q02985 330 aa12.22□□□□□ -0.45
DKC1-201ENST00000369550 ABCA2Q9BZC7 2435 aa12.21□□□□□ -0.45
DKC1-201ENST00000369550 IGHV3OR16-12A0A075B7B8 117 aa12.21□□□□□ -0.46
DKC1-201ENST00000369550 IGLV5-39A0A0G2JS06 123 aa12.21□□□□□ -0.46
DKC1-201ENST00000369550 C10orf99Q6UWK7 81 aa12.21□□□□□ -0.46
DKC1-201ENST00000369550 MAP1AP78559 2803 aaPredicted RBP12.2□□□□□ -0.46
DKC1-201ENST00000369550 HOXD3P31249 432 aaPredicted RBP12.2□□□□□ -0.46
DKC1-201ENST00000369550 LINC00242Q5T6M2 205 aa12.2□□□□□ -0.46
DKC1-201ENST00000369550 TRAV13-1A0A0B4J241 112 aa12.2□□□□□ -0.46
DKC1-201ENST00000369550 PSMB8P28062 276 aa12.2□□□□□ -0.46
DKC1-201ENST00000369550 ZNF415Q09FC8 603 aa12.19□□□□□ -0.46
DKC1-201ENST00000369550 PIK3CD-AS1Q5SR53 167 aa12.19□□□□□ -0.46
DKC1-201ENST00000369550 FAM222AQ5U5X8 452 aa12.19□□□□□ -0.46
DKC1-201ENST00000369550 C22orf24Q9Y442 160 aa12.19□□□□□ -0.46
DKC1-201ENST00000369550 CACNA1AO00555 2505 aa12.19□□□□□ -0.46
DKC1-201ENST00000369550 ATOX1O00244 68 aa12.19□□□□□ -0.46
DKC1-201ENST00000369550 DNAL4O96015 105 aa12.19□□□□□ -0.46
DKC1-201ENST00000369550 MALP21145 153 aa12.19□□□□□ -0.46
DKC1-201ENST00000369550 PKD1L2Q7Z442 2459 aa12.18□□□□□ -0.46
DKC1-201ENST00000369550 PIEZO1Q92508 2521 aa12.18□□□□□ -0.46
DKC1-201ENST00000369550 SMIM1B2RUZ4 78 aa12.18□□□□□ -0.46
DKC1-201ENST00000369550 LRRC75A-AS1Q8N1F1 130 aa12.18□□□□□ -0.46
DKC1-201ENST00000369550 RS1O15537 224 aa12.18□□□□□ -0.46
DKC1-201ENST00000369550 IGHV4-61A0A0C4DH41 118 aa12.17□□□□□ -0.46
DKC1-201ENST00000369550 IGHV3-53P01767 116 aa12.17□□□□□ -0.46
DKC1-201ENST00000369550 HIST2H2BCQ6DN03 193 aa12.17□□□□□ -0.46
DKC1-201ENST00000369550 HIST2H2BDQ6DRA6 164 aa12.17□□□□□ -0.46
DKC1-201ENST00000369550 hADV29S1A0JD25 119 aa12.17□□□□□ -0.46
DKC1-201ENST00000369550 CRYGAP11844 174 aa12.16□□□□□ -0.46
DKC1-201ENST00000369550 DEFB131AP59861 70 aa12.16□□□□□ -0.46
DKC1-201ENST00000369550 RNF152Q8N8N0 203 aa12.16□□□□□ -0.46
DKC1-201ENST00000369550 NACAE9PAV3 2078 aa12.16□□□□□ -0.46
DKC1-201ENST00000369550 FAM19A5Q7Z5A7 132 aaPredicted RBP12.16□□□□□ -0.46
DKC1-201ENST00000369550 C2orf48Q96LS8 159 aa12.16□□□□□ -0.46
DKC1-201ENST00000369550 A0A1B0GX51 115 aa12.15□□□□□ -0.46
DKC1-201ENST00000369550 CRPP02741 224 aa12.15□□□□□ -0.46
DKC1-201ENST00000369550 CRYBG3Q68DQ2 2970 aa12.14□□□□□ -0.47
DKC1-201ENST00000369550 TRAV13-2A0A0B4J235 113 aa12.14□□□□□ -0.47
DKC1-201ENST00000369550 PIMREGQ9BSJ6 248 aa12.14□□□□□ -0.47
DKC1-201ENST00000369550 HIST1H4AP62805 103 aaKnown RBP12.13□□□□□ -0.47
DKC1-201ENST00000369550 C14orf132Q9NPU4 83 aa12.13□□□□□ -0.47
DKC1-201ENST00000369550 IGKV3D-7A0A0C4DH55 119 aa12.13□□□□□ -0.47
DKC1-201ENST00000369550 C5orf47Q569G3 176 aa12.13□□□□□ -0.47
DKC1-201ENST00000369550 RPL28P46779 137 aaKnown RBP12.12□□□□□ -0.47
DKC1-201ENST00000369550 RPL18AQ02543 176 aaKnown RBP12.12□□□□□ -0.47
DKC1-201ENST00000369550 RBMY1BA6NDE4 496 aaKnown RBP12.11□□□□□ -0.47
DKC1-201ENST00000369550 RBMY1EA6NEQ0 496 aaKnown RBP12.11□□□□□ -0.47
DKC1-201ENST00000369550 RBMY1DP0C7P1 496 aaKnown RBP12.11□□□□□ -0.47
DKC1-201ENST00000369550 SMIM9A6NGZ8 99 aa12.11□□□□□ -0.47
DKC1-201ENST00000369550 PF4P02776 101 aa12.11□□□□□ -0.47
DKC1-201ENST00000369550 CSPG4Q6UVK1 2322 aa12.1□□□□□ -0.47
DKC1-201ENST00000369550 CCL19Q99731 98 aa12.1□□□□□ -0.47
DKC1-201ENST00000369550 A0A087WYN8 130 aa12.1□□□□□ -0.47
DKC1-201ENST00000369550 ATP5J2P56134 94 aa12.1□□□□□ -0.47
DKC1-201ENST00000369550 LINC00337Q8N6G1 96 aa12.1□□□□□ -0.47
DKC1-201ENST00000369550 OVOL2Q9BRP0 275 aa12.1□□□□□ -0.47
DKC1-201ENST00000369550 CYSTM1Q9H1C7 97 aa12.09□□□□□ -0.47
DKC1-201ENST00000369550 IGHV4-59P01825 116 aa12.09□□□□□ -0.47
DKC1-201ENST00000369550 C9orf129Q5T035 196 aaKnown RBP12.09□□□□□ -0.47
DKC1-201ENST00000369550 C11orf72Q8NBR9 251 aa12.09□□□□□ -0.47
DKC1-201ENST00000369550 CFAP46Q8IYW2 2715 aa12.08□□□□□ -0.48
DKC1-201ENST00000369550 MIR7-3HGQ8N6C7 128 aa12.08□□□□□ -0.48
DKC1-201ENST00000369550 SND1-IT1Q9HBX3 110 aa12.08□□□□□ -0.48
DKC1-201ENST00000369550 A0A087WVE0 104 aa12.08□□□□□ -0.48
DKC1-201ENST00000369550 F5H768 121 aa12.08□□□□□ -0.48
DKC1-201ENST00000369550 TMEM89A2RUT3 159 aa12.07□□□□□ -0.48
DKC1-201ENST00000369550 RPS28P62857 69 aaKnown RBP12.07□□□□□ -0.48
DKC1-201ENST00000369550 OR13C6PQ8NH95 151 aa12.07□□□□□ -0.48
DKC1-201ENST00000369550 LINC00846Q9NV44 126 aa12.07□□□□□ -0.48
DKC1-201ENST00000369550 MSMBP08118 114 aa12.07□□□□□ -0.48
DKC1-201ENST00000369550 C10orf105Q8TEF2 133 aa12.07□□□□□ -0.48
DKC1-201ENST00000369550 FAM19A3Q7Z5A8 133 aa12.06□□□□□ -0.48
DKC1-201ENST00000369550 SMIM11BQ8TCY0 68 aa12.06□□□□□ -0.48
DKC1-201ENST00000369550 TOMM7Q9P0U1 55 aa12.06□□□□□ -0.48
DKC1-201ENST00000369550 SERP2Q8N6R1 65 aa12.06□□□□□ -0.48
DKC1-201ENST00000369550 AVPP01185 164 aa12.05□□□□□ -0.48
DKC1-201ENST00000369550 IGKV2-28A0A075B6P5 120 aa12.05□□□□□ -0.48
DKC1-201ENST00000369550 IGKV2D-28P01615 120 aa12.05□□□□□ -0.48
DKC1-201ENST00000369550 RPL36AP83881 106 aaKnown RBP12.05□□□□□ -0.48
DKC1-201ENST00000369550 Q6JHZ5 121 aa12.05□□□□□ -0.48
DKC1-201ENST00000369550 RPL36ALQ969Q0 106 aaKnown RBP12.05□□□□□ -0.48
DKC1-201ENST00000369550 CDC42SE2Q9NRR3 84 aa12.05□□□□□ -0.48
DKC1-201ENST00000369550 IGSF10Q6WRI0 2623 aa12.05□□□□□ -0.48
DKC1-201ENST00000369550 SPG11Q96JI7 2443 aa12.05□□□□□ -0.48
DKC1-201ENST00000369550 INSP01308 110 aa12.04□□□□□ -0.48
DKC1-201ENST00000369550 LINC00158P58513 81 aa12.04□□□□□ -0.48
DKC1-201ENST00000369550 TMEM258P61165 79 aa12.04□□□□□ -0.48
DKC1-201ENST00000369550 Q96MF0 132 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms