RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 LINC00308Q8TCZ7 52 aa7.67□□□□□ -1.18
LYSMD1-201ENST00000368908 SNRPD3P62318 126 aaKnown RBP7.67□□□□□ -1.18
LYSMD1-201ENST00000368908 BEAN1Q3B7T3 259 aa7.67□□□□□ -1.18
LYSMD1-201ENST00000368908 CEMP1Q6PRD7 247 aaPredicted RBP7.67□□□□□ -1.18
LYSMD1-201ENST00000368908 TRAV12-2A0A075B6T6 113 aa7.66□□□□□ -1.18
LYSMD1-201ENST00000368908 AKAP9Q99996 3911 aa7.66□□□□□ -1.18
LYSMD1-201ENST00000368908 CUBNO60494 3623 aa7.66□□□□□ -1.18
LYSMD1-201ENST00000368908 CCDC168Q8NDH2 2452 aa7.66□□□□□ -1.18
LYSMD1-201ENST00000368908 A8MZ25 164 aa7.66□□□□□ -1.18
LYSMD1-201ENST00000368908 K7EQG2 157 aa7.66□□□□□ -1.18
LYSMD1-201ENST00000368908 INAFM2P0DMQ5 153 aa7.66□□□□□ -1.18
LYSMD1-201ENST00000368908 LINC00694P0DN24 101 aa7.66□□□□□ -1.18
LYSMD1-201ENST00000368908 COX7CP15954 63 aa7.66□□□□□ -1.18
LYSMD1-201ENST00000368908 HIST1H4AP62805 103 aaKnown RBP7.66□□□□□ -1.18
LYSMD1-201ENST00000368908 HIST2H2BCQ6DN03 193 aa7.66□□□□□ -1.18
LYSMD1-201ENST00000368908 TLN2Q9Y4G6 2542 aa7.65□□□□□ -1.18
LYSMD1-201ENST00000368908 IGLV5-39A0A0G2JS06 123 aa7.65□□□□□ -1.18
LYSMD1-201ENST00000368908 J3KT08 172 aa7.65□□□□□ -1.18
LYSMD1-201ENST00000368908 DAZ2Q13117 558 aaKnown RBP7.65□□□□□ -1.18
LYSMD1-201ENST00000368908 DAZ4Q86SG3 579 aaKnown RBP7.65□□□□□ -1.18
LYSMD1-201ENST00000368908 C3orf56Q8N813 242 aa7.65□□□□□ -1.18
LYSMD1-201ENST00000368908 DUX5Q96PT3 197 aa7.65□□□□□ -1.18
LYSMD1-201ENST00000368908 DAZ3Q9NR90 486 aaKnown RBP7.65□□□□□ -1.18
LYSMD1-201ENST00000368908 A6NDX4 124 aa7.64□□□□□ -1.19
LYSMD1-201ENST00000368908 ATP5J2P56134 94 aa7.64□□□□□ -1.19
LYSMD1-201ENST00000368908 HERVK_113P63121 156 aa7.64□□□□□ -1.19
LYSMD1-201ENST00000368908 CFHR3Q02985 330 aa7.64□□□□□ -1.19
LYSMD1-201ENST00000368908 SPINK13Q1W4C9 94 aa7.64□□□□□ -1.19
LYSMD1-201ENST00000368908 RNASE13Q5GAN3 156 aaKnown RBP7.64□□□□□ -1.19
LYSMD1-201ENST00000368908 ABCA2Q9BZC7 2435 aa7.64□□□□□ -1.19
LYSMD1-201ENST00000368908 CRYGAP11844 174 aa7.64□□□□□ -1.19
LYSMD1-201ENST00000368908 EDN2P20800 178 aa7.64□□□□□ -1.19
LYSMD1-201ENST00000368908 OXLD1Q5BKU9 147 aa7.64□□□□□ -1.19
LYSMD1-201ENST00000368908 CSDC2Q9Y534 153 aaKnown RBP7.64□□□□□ -1.19
LYSMD1-201ENST00000368908 ATOX1O00244 68 aa7.63□□□□□ -1.19
LYSMD1-201ENST00000368908 ZNF415Q09FC8 603 aa7.63□□□□□ -1.19
LYSMD1-201ENST00000368908 CDKN2A-AS1Q9UH64 79 aa7.63□□□□□ -1.19
LYSMD1-201ENST00000368908 TEX15Q9BXT5 2789 aa7.63□□□□□ -1.19
LYSMD1-201ENST00000368908 MXRA5Q9NR99 2828 aa7.63□□□□□ -1.19
LYSMD1-201ENST00000368908 BAALC-AS2P0C853 105 aa7.63□□□□□ -1.19
LYSMD1-201ENST00000368908 RPS28P62857 69 aaKnown RBP7.63□□□□□ -1.19
LYSMD1-201ENST00000368908 FAM19A3Q7Z5A8 133 aa7.63□□□□□ -1.19
LYSMD1-201ENST00000368908 C2orf48Q96LS8 159 aa7.63□□□□□ -1.19
LYSMD1-201ENST00000368908 BPESC1Q9GZL8 116 aa7.63□□□□□ -1.19
LYSMD1-201ENST00000368908 C22orf24Q9Y442 160 aa7.63□□□□□ -1.19
LYSMD1-201ENST00000368908 LINC00467Q9BRT7 94 aa7.62□□□□□ -1.19
LYSMD1-201ENST00000368908 NACAE9PAV3 2078 aa7.62□□□□□ -1.19
LYSMD1-201ENST00000368908 IGKV3-20P01619 116 aa7.62□□□□□ -1.19
LYSMD1-201ENST00000368908 C5orf47Q569G3 176 aa7.62□□□□□ -1.19
LYSMD1-201ENST00000368908 UBTD1Q9HAC8 227 aa7.62□□□□□ -1.19
LYSMD1-201ENST00000368908 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.61□□□□□ -1.19
LYSMD1-201ENST00000368908 IGKV2-29A2NJV5 120 aaPredicted RBP7.61□□□□□ -1.19
LYSMD1-201ENST00000368908 OVOL2Q9BRP0 275 aa7.61□□□□□ -1.19
LYSMD1-201ENST00000368908 Q9H8V8 135 aa7.61□□□□□ -1.19
LYSMD1-201ENST00000368908 A8MTW9 85 aa7.61□□□□□ -1.19
LYSMD1-201ENST00000368908 PF4P02776 101 aa7.61□□□□□ -1.19
LYSMD1-201ENST00000368908 SOSTDC1Q6X4U4 206 aa7.61□□□□□ -1.19
LYSMD1-201ENST00000368908 PROK1P58294 105 aa7.6□□□□□ -1.19
LYSMD1-201ENST00000368908 KRTAP10-9P60411 292 aa7.6□□□□□ -1.19
LYSMD1-201ENST00000368908 NAV2Q8IVL1 2488 aa7.6□□□□□ -1.19
LYSMD1-201ENST00000368908 IGHV3OR16-10A0A075B7F0 116 aa7.6□□□□□ -1.19
LYSMD1-201ENST00000368908 LY6EQ16553 131 aa7.6□□□□□ -1.19
LYSMD1-201ENST00000368908 Q8N2B8 174 aa7.6□□□□□ -1.19
LYSMD1-201ENST00000368908 IGHV3-73A0A0B4J1V6 119 aa7.59□□□□□ -1.19
LYSMD1-201ENST00000368908 TMEM89A2RUT3 159 aa7.59□□□□□ -1.19
LYSMD1-201ENST00000368908 IGHV3-53P01767 116 aa7.59□□□□□ -1.19
LYSMD1-201ENST00000368908 GAGE2AQ6NT46 116 aa7.59□□□□□ -1.19
LYSMD1-201ENST00000368908 BRD3OSQ6XYD6 125 aa7.59□□□□□ -1.19
LYSMD1-201ENST00000368908 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.59□□□□□ -1.19
LYSMD1-201ENST00000368908 ZNF625Q96I27 306 aaPredicted RBP7.59□□□□□ -1.19
LYSMD1-201ENST00000368908 CCL19Q99731 98 aa7.59□□□□□ -1.19
LYSMD1-201ENST00000368908 NOTCH2Q04721 2471 aa7.59□□□□□ -1.19
LYSMD1-201ENST00000368908 H3BUX3 64 aa7.59□□□□□ -1.19
LYSMD1-201ENST00000368908 RBMY1A1P0DJD3 496 aaKnown RBP7.59□□□□□ -1.19
LYSMD1-201ENST00000368908 RBMY1CP0DJD4 496 aa7.59□□□□□ -1.19
LYSMD1-201ENST00000368908 RBMY1FQ15415 496 aaKnown RBP7.59□□□□□ -1.19
LYSMD1-201ENST00000368908 UNC79Q9P2D8 2635 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 SMIM1B2RUZ4 78 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 MALP21145 153 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 RPL28P46779 137 aaKnown RBP7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 Q6JHZ5 121 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 IGHV3OR16-12A0A075B7B8 117 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 TRAV13-2A0A0B4J235 113 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 SMIM9A6NGZ8 99 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 PSMB8P28062 276 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 BLCAPP62952 87 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 COX6A2Q02221 97 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 RPL18AQ02543 176 aaKnown RBP7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 LINC00242Q5T6M2 205 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 HIST2H2BDQ6DRA6 164 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 Q6ZSN1 163 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 PRIMA1Q86XR5 153 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 FAM218AQ96MZ4 157 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 CSPG4Q6UVK1 2322 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 ACANP16112 2415 aa7.58□□□□□ -1.2
LYSMD1-201ENST00000368908 NF1P21359 2839 aa7.57□□□□□ -1.2
LYSMD1-201ENST00000368908 TRAV25A0A0B4J276 109 aa7.57□□□□□ -1.2
LYSMD1-201ENST00000368908 PDZD2O15018 2839 aa7.57□□□□□ -1.2
LYSMD1-201ENST00000368908 DEFB113Q30KQ7 82 aa7.57□□□□□ -1.2
LYSMD1-201ENST00000368908 DGAT2L7PQ6IED9 249 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms