RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 PPP1R17O96001 155 aa8.68□□□□□ -1.02
USF1-203ENST00000368021 NPYP01303 97 aa8.68□□□□□ -1.02
USF1-203ENST00000368021 IGHV4-30-4P0DP06 118 aa8.68□□□□□ -1.02
USF1-203ENST00000368021 DAZ2Q13117 558 aaKnown RBP8.68□□□□□ -1.02
USF1-203ENST00000368021 A0A087WWL8 130 aa8.68□□□□□ -1.02
USF1-203ENST00000368021 TRAV26-2A0A0B4J265 109 aa8.68□□□□□ -1.02
USF1-203ENST00000368021 SMIM9A6NGZ8 99 aa8.68□□□□□ -1.02
USF1-203ENST00000368021 A8MZ25 164 aa8.68□□□□□ -1.02
USF1-203ENST00000368021 DPM2O94777 84 aa8.68□□□□□ -1.02
USF1-203ENST00000368021 GAS8-AS1O95177 125 aa8.68□□□□□ -1.02
USF1-203ENST00000368021 IGKCP01834 107 aa8.68□□□□□ -1.02
USF1-203ENST00000368021 MGPP08493 103 aa8.68□□□□□ -1.02
USF1-203ENST00000368021 MEIG1Q5JSS6 88 aa8.68□□□□□ -1.02
USF1-203ENST00000368021 NRACQ8N912 160 aa8.68□□□□□ -1.02
USF1-203ENST00000368021 DNAH9Q9NYC9 4486 aa8.67□□□□□ -1.02
USF1-203ENST00000368021 PLAC8L1A1L4L8 177 aa8.66□□□□□ -1.02
USF1-203ENST00000368021 GATA1P15976 413 aaPredicted RBP8.66□□□□□ -1.02
USF1-203ENST00000368021 PLNP26678 52 aa8.66□□□□□ -1.02
USF1-203ENST00000368021 FAM74A4Q5TZK3 123 aa8.66□□□□□ -1.02
USF1-203ENST00000368021 NXT2Q9NPJ8 142 aaKnown RBP8.66□□□□□ -1.02
USF1-203ENST00000368021 MYMXA0A1B0GTQ4 84 aa8.66□□□□□ -1.02
USF1-203ENST00000368021 FAM240AA0A1B0GVK7 77 aa8.66□□□□□ -1.02
USF1-203ENST00000368021 IFI27P40305 119 aaPredicted RBP8.66□□□□□ -1.02
USF1-203ENST00000368021 HIST1H4GQ99525 98 aa8.66□□□□□ -1.02
USF1-203ENST00000368021 OVOL2Q9BRP0 275 aa8.66□□□□□ -1.02
USF1-203ENST00000368021 EDA2RQ9HAV5 297 aa8.66□□□□□ -1.02
USF1-203ENST00000368021 NACAE9PAV3 2078 aa8.65□□□□□ -1.02
USF1-203ENST00000368021 UBE2D3P61077 147 aa8.65□□□□□ -1.02
USF1-203ENST00000368021 UBE2D2P62837 147 aa8.65□□□□□ -1.02
USF1-203ENST00000368021 SUMO4Q6EEV6 95 aa8.65□□□□□ -1.02
USF1-203ENST00000368021 PCP2Q8IVA1 136 aa8.65□□□□□ -1.02
USF1-203ENST00000368021 TRGV1A0A0A0MS02 117 aa8.64□□□□□ -1.03
USF1-203ENST00000368021 LOC389332A0A1B0GUA5 103 aa8.64□□□□□ -1.03
USF1-203ENST00000368021 F5H697 171 aa8.64□□□□□ -1.03
USF1-203ENST00000368021 RS1O15537 224 aa8.64□□□□□ -1.03
USF1-203ENST00000368021 ZNF56Q15929 161 aa8.64□□□□□ -1.03
USF1-203ENST00000368021 ZFP2Q6ZN57 461 aa8.64□□□□□ -1.03
USF1-203ENST00000368021 X6R8D5 127 aa8.64□□□□□ -1.03
USF1-203ENST00000368021 NBEAL2Q6ZNJ1 2754 aa8.64□□□□□ -1.03
USF1-203ENST00000368021 IGLV2-18A0A075B6J9 118 aa8.64□□□□□ -1.03
USF1-203ENST00000368021 A4D1N5 150 aa8.64□□□□□ -1.03
USF1-203ENST00000368021 M0QY20 66 aa8.64□□□□□ -1.03
USF1-203ENST00000368021 SUMO2P61956 95 aaKnown RBP8.64□□□□□ -1.03
USF1-203ENST00000368021 PMVKQ15126 192 aa8.64□□□□□ -1.03
USF1-203ENST00000368021 DEFB135Q30KP9 77 aa8.64□□□□□ -1.03
USF1-203ENST00000368021 NOP10Q9NPE3 64 aaKnown RBP8.64□□□□□ -1.03
USF1-203ENST00000368021 CCDC179H3BU77 68 aa8.63□□□□□ -1.03
USF1-203ENST00000368021 H7C1H1 209 aa8.63□□□□□ -1.03
USF1-203ENST00000368021 NFE4Q86UQ8 179 aa8.63□□□□□ -1.03
USF1-203ENST00000368021 Q8N8P6 123 aa8.63□□□□□ -1.03
USF1-203ENST00000368021 ZNRF2Q8NHG8 242 aa8.63□□□□□ -1.03
USF1-203ENST00000368021 RPL39LQ96EH5 51 aaKnown RBP8.63□□□□□ -1.03
USF1-203ENST00000368021 TRBV7-3A0A075B6L6 115 aa8.62□□□□□ -1.03
USF1-203ENST00000368021 TRBV6-5A0A0K0K1A5 114 aa8.62□□□□□ -1.03
USF1-203ENST00000368021 K7EMI3 77 aa8.62□□□□□ -1.03
USF1-203ENST00000368021 FCER1GP30273 86 aa8.62□□□□□ -1.03
USF1-203ENST00000368021 RPL13AP40429 203 aaKnown RBP8.62□□□□□ -1.03
USF1-203ENST00000368021 Q6ZTI0 123 aa8.62□□□□□ -1.03
USF1-203ENST00000368021 SMIM2Q9BVW6 85 aa8.62□□□□□ -1.03
USF1-203ENST00000368021 TRAV4A0A0B4J268 109 aa8.61□□□□□ -1.03
USF1-203ENST00000368021 A0A096LNJ9 63 aa8.61□□□□□ -1.03
USF1-203ENST00000368021 K7ERJ3 54 aa8.61□□□□□ -1.03
USF1-203ENST00000368021 UQCRQO14949 82 aa8.61□□□□□ -1.03
USF1-203ENST00000368021 IGHV3-53P01767 116 aa8.61□□□□□ -1.03
USF1-203ENST00000368021 ACYP1P07311 99 aa8.61□□□□□ -1.03
USF1-203ENST00000368021 HHLA3Q9XRX5 114 aa8.61□□□□□ -1.03
USF1-203ENST00000368021 TRBV7-7A0A0K0K1E9 115 aa8.6□□□□□ -1.03
USF1-203ENST00000368021 LINC01549A6NIU2 74 aa8.6□□□□□ -1.03
USF1-203ENST00000368021 MIFP14174 115 aa8.6□□□□□ -1.03
USF1-203ENST00000368021 SMCPP49901 116 aaPredicted RBP8.6□□□□□ -1.03
USF1-203ENST00000368021 POLR2KP53803 58 aaKnown RBP8.6□□□□□ -1.03
USF1-203ENST00000368021 LINC00612Q8N6U2 182 aa8.6□□□□□ -1.03
USF1-203ENST00000368021 C18orf15Q96N68 181 aa8.6□□□□□ -1.03
USF1-203ENST00000368021 TP53TG1Q9Y2A0 90 aa8.6□□□□□ -1.03
USF1-203ENST00000368021 HUWE1Q7Z6Z7 4374 aaKnown RBP8.59□□□□□ -1.03
USF1-203ENST00000368021 UBE2D1P51668 147 aa8.59□□□□□ -1.03
USF1-203ENST00000368021 TMEM101Q96IK0 257 aa8.59□□□□□ -1.03
USF1-203ENST00000368021 CARD19Q96LW7 228 aa8.59□□□□□ -1.03
USF1-203ENST00000368021 PPDPFQ9H3Y8 114 aa8.59□□□□□ -1.03
USF1-203ENST00000368021 TRGV2A0A075B6R0 118 aa8.59□□□□□ -1.03
USF1-203ENST00000368021 IGHV3-73A0A0B4J1V6 119 aa8.59□□□□□ -1.03
USF1-203ENST00000368021 TRAV12-1A0A0B4J245 112 aa8.59□□□□□ -1.03
USF1-203ENST00000368021 TRAV8-4A0A0B4J246 113 aa8.59□□□□□ -1.03
USF1-203ENST00000368021 TRBV27A0A0K0K1C4 114 aa8.59□□□□□ -1.03
USF1-203ENST00000368021 SDHAF1A6NFY7 115 aa8.59□□□□□ -1.03
USF1-203ENST00000368021 PSMB2P49721 201 aa8.59□□□□□ -1.03
USF1-203ENST00000368021 LAGE3Q14657 143 aa8.59□□□□□ -1.03
USF1-203ENST00000368021 B9D2Q9BPU9 175 aa8.59□□□□□ -1.03
USF1-203ENST00000368021 PRADC1Q9BSG0 188 aa8.59□□□□□ -1.03
USF1-203ENST00000368021 LYRM9A8MSI8 78 aa8.58□□□□□ -1.04
USF1-203ENST00000368021 F8WDY8 70 aa8.58□□□□□ -1.04
USF1-203ENST00000368021 VCYO14598 125 aa8.58□□□□□ -1.04
USF1-203ENST00000368021 ORMDL2Q53FV1 153 aa8.58□□□□□ -1.04
USF1-203ENST00000368021 Q8NAQ8 132 aa8.58□□□□□ -1.04
USF1-203ENST00000368021 PRSS1P07477 247 aa8.57□□□□□ -1.04
USF1-203ENST00000368021 EMP1P54849 157 aa8.57□□□□□ -1.04
USF1-203ENST00000368021 ZC2HC1BQ5TFG8 222 aa8.57□□□□□ -1.04
USF1-203ENST00000368021 Q6ZSN1 163 aa8.57□□□□□ -1.04
USF1-203ENST00000368021 IGHV4-28A0A0C4DH34 117 aa8.57□□□□□ -1.04
USF1-203ENST00000368021 C9JAW5 83 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms