RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 NOP10Q9NPE3 64 aaKnown RBP10.04□□□□□ -0.8
USF1-202ENST00000368020 VWFP04275 2813 aa10.04□□□□□ -0.8
USF1-202ENST00000368020 TRBV6-4A0A1B0GX49 114 aa10.04□□□□□ -0.8
USF1-202ENST00000368020 C9orf66Q5T8R8 295 aa10.04□□□□□ -0.8
USF1-202ENST00000368020 TRGV2A0A075B6R0 118 aa10.03□□□□□ -0.8
USF1-202ENST00000368020 IGLL5B9A064 214 aa10.03□□□□□ -0.8
USF1-202ENST00000368020 TMEM238C9JI98 176 aa10.03□□□□□ -0.8
USF1-202ENST00000368020 GTSF1LQ9H1H1 148 aa10.03□□□□□ -0.8
USF1-202ENST00000368020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.02□□□□□ -0.8
USF1-202ENST00000368020 PLAC8L1A1L4L8 177 aa10.02□□□□□ -0.8
USF1-202ENST00000368020 IGKV2-29A2NJV5 120 aaPredicted RBP10.02□□□□□ -0.8
USF1-202ENST00000368020 H7C423 109 aa10.02□□□□□ -0.8
USF1-202ENST00000368020 K7ERJ3 54 aa10.02□□□□□ -0.8
USF1-202ENST00000368020 PCP4P48539 62 aa10.02□□□□□ -0.8
USF1-202ENST00000368020 TSPEAR-AS2P59090 65 aa10.02□□□□□ -0.8
USF1-202ENST00000368020 UBE2D3P61077 147 aa10.02□□□□□ -0.8
USF1-202ENST00000368020 UBE2D2P62837 147 aa10.02□□□□□ -0.8
USF1-202ENST00000368020 WFDC9Q8NEX5 89 aa10.02□□□□□ -0.8
USF1-202ENST00000368020 FAM104AQ969W3 186 aa10.02□□□□□ -0.8
USF1-202ENST00000368020 GEMIN7Q9H840 131 aaKnown RBP10.02□□□□□ -0.8
USF1-202ENST00000368020 IGHV1-58A0A0C4DH39 117 aa10.02□□□□□ -0.81
USF1-202ENST00000368020 UBE2D1P51668 147 aa10.02□□□□□ -0.81
USF1-202ENST00000368020 TIRAPP58753 221 aa10.02□□□□□ -0.81
USF1-202ENST00000368020 LYRM7Q5U5X0 104 aa10.02□□□□□ -0.81
USF1-202ENST00000368020 MDFIQ99750 246 aa10.02□□□□□ -0.81
USF1-202ENST00000368020 WFDC10AQ9H1F0 79 aa10.02□□□□□ -0.81
USF1-202ENST00000368020 Q9UF83 564 aa10.02□□□□□ -0.81
USF1-202ENST00000368020 IGHV3-38A0A0C4DH36 116 aa10.01□□□□□ -0.81
USF1-202ENST00000368020 SMIM9A6NGZ8 99 aa10.01□□□□□ -0.81
USF1-202ENST00000368020 KRTAP21-3Q3LHN1 58 aa10.01□□□□□ -0.81
USF1-202ENST00000368020 IGHV3-30-3P0DP02 117 aa10□□□□□ -0.81
USF1-202ENST00000368020 HERVK_113P63121 156 aa10□□□□□ -0.81
USF1-202ENST00000368020 Q6ZUT4 128 aa10□□□□□ -0.81
USF1-202ENST00000368020 FAM19A3Q7Z5A8 133 aa10□□□□□ -0.81
USF1-202ENST00000368020 IGLV5-45A0A087WSX0 123 aa9.99□□□□□ -0.81
USF1-202ENST00000368020 IGHV3-30P01768 117 aa9.99□□□□□ -0.81
USF1-202ENST00000368020 IGHV3-30-5P0DP03 117 aa9.99□□□□□ -0.81
USF1-202ENST00000368020 RPL24P83731 157 aaKnown RBP9.99□□□□□ -0.81
USF1-202ENST00000368020 CEMP1Q6PRD7 247 aaPredicted RBP9.99□□□□□ -0.81
USF1-202ENST00000368020 NAA38Q9BRA0 125 aaKnown RBP9.99□□□□□ -0.81
USF1-202ENST00000368020 TRGV4A0A0C4DH28 118 aa9.99□□□□□ -0.81
USF1-202ENST00000368020 GAGE7O76087 117 aa9.99□□□□□ -0.81
USF1-202ENST00000368020 GAGE12FP0CL80 117 aa9.99□□□□□ -0.81
USF1-202ENST00000368020 GAGE12GP0CL81 117 aa9.99□□□□□ -0.81
USF1-202ENST00000368020 GAGE12IP0CL82 117 aa9.99□□□□□ -0.81
USF1-202ENST00000368020 KIR2DL5BQ8NHK3 375 aa9.99□□□□□ -0.81
USF1-202ENST00000368020 VSIG2Q96IQ7 327 aa9.99□□□□□ -0.81
USF1-202ENST00000368020 K7ERU9 68 aa9.98□□□□□ -0.81
USF1-202ENST00000368020 UBE2L6O14933 153 aa9.98□□□□□ -0.81
USF1-202ENST00000368020 TMEM243Q9BU79 118 aa9.98□□□□□ -0.81
USF1-202ENST00000368020 TMEM101Q96IK0 257 aa9.97□□□□□ -0.81
USF1-202ENST00000368020 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.96□□□□□ -0.81
USF1-202ENST00000368020 GAGE12JA6NER3 117 aa9.96□□□□□ -0.81
USF1-202ENST00000368020 WIPF1O43516 503 aa9.96□□□□□ -0.81
USF1-202ENST00000368020 GAGE4Q13068 117 aa9.96□□□□□ -0.81
USF1-202ENST00000368020 GAGE5Q13069 117 aa9.96□□□□□ -0.81
USF1-202ENST00000368020 GAGE13Q4V321 117 aa9.96□□□□□ -0.81
USF1-202ENST00000368020 OCIAD2Q56VL3 154 aa9.96□□□□□ -0.81
USF1-202ENST00000368020 SBSPONQ8IVN8 264 aa9.96□□□□□ -0.81
USF1-202ENST00000368020 PGPEP1Q9NXJ5 209 aa9.96□□□□□ -0.81
USF1-202ENST00000368020 F8W1H4 67 aa9.96□□□□□ -0.82
USF1-202ENST00000368020 NDUFA12Q9UI09 145 aa9.96□□□□□ -0.82
USF1-202ENST00000368020 IGHV3-64A0A075B6Q5 118 aa9.95□□□□□ -0.82
USF1-202ENST00000368020 A0A0J9YXY3 114 aa9.95□□□□□ -0.82
USF1-202ENST00000368020 TIMM17BO60830 172 aa9.95□□□□□ -0.82
USF1-202ENST00000368020 RNASE13Q5GAN3 156 aaKnown RBP9.95□□□□□ -0.82
USF1-202ENST00000368020 ZFAND6Q6FIF0 208 aa9.95□□□□□ -0.82
USF1-202ENST00000368020 LINC00612Q8N6U2 182 aa9.95□□□□□ -0.82
USF1-202ENST00000368020 APOC4P55056 127 aa9.94□□□□□ -0.82
USF1-202ENST00000368020 NTM-AS1Q6ZSK4 140 aa9.94□□□□□ -0.82
USF1-202ENST00000368020 C10orf126Q8N4M7 172 aa9.94□□□□□ -0.82
USF1-202ENST00000368020 SPATA3Q8NHX4 192 aa9.94□□□□□ -0.82
USF1-202ENST00000368020 A0A0B4J2C4 111 aa9.93□□□□□ -0.82
USF1-202ENST00000368020 FHL2Q14192 279 aa9.93□□□□□ -0.82
USF1-202ENST00000368020 SPANXDQ9BXN6 97 aa9.93□□□□□ -0.82
USF1-202ENST00000368020 SPANXCQ9NY87 97 aa9.93□□□□□ -0.82
USF1-202ENST00000368020 PRO1854Q9UHT4 67 aa9.93□□□□□ -0.82
USF1-202ENST00000368020 RNF183Q96D59 192 aa9.93□□□□□ -0.82
USF1-202ENST00000368020 CDC42SE2Q9NRR3 84 aa9.93□□□□□ -0.82
USF1-202ENST00000368020 TRAV8-3A0A0A6YYJ7 113 aa9.92□□□□□ -0.82
USF1-202ENST00000368020 LYRM9A8MSI8 78 aa9.92□□□□□ -0.82
USF1-202ENST00000368020 NDUFA1O15239 70 aa9.92□□□□□ -0.82
USF1-202ENST00000368020 APOMO95445 188 aa9.92□□□□□ -0.82
USF1-202ENST00000368020 SPINK8P0C7L1 97 aa9.92□□□□□ -0.82
USF1-202ENST00000368020 COPS9Q8WXC6 57 aa9.92□□□□□ -0.82
USF1-202ENST00000368020 CDKN2A-AS1Q9UH64 79 aa9.92□□□□□ -0.82
USF1-202ENST00000368020 PKD1L1Q8TDX9 2849 aa9.91□□□□□ -0.82
USF1-202ENST00000368020 TRBV20-1A0A075B6N2 111 aa9.91□□□□□ -0.82
USF1-202ENST00000368020 IGLV5-39A0A0G2JS06 123 aa9.91□□□□□ -0.82
USF1-202ENST00000368020 TSPAN13O95857 204 aa9.91□□□□□ -0.82
USF1-202ENST00000368020 CFC1BP0CG36 223 aa9.91□□□□□ -0.82
USF1-202ENST00000368020 CFC1P0CG37 223 aa9.91□□□□□ -0.82
USF1-202ENST00000368020 LINC00694P0DN24 101 aa9.91□□□□□ -0.82
USF1-202ENST00000368020 CIRBPQ14011 172 aaKnown RBP9.91□□□□□ -0.82
USF1-202ENST00000368020 LINC00242Q5T6M2 205 aa9.91□□□□□ -0.82
USF1-202ENST00000368020 TRRAPQ9Y4A5 3859 aa9.91□□□□□ -0.82
USF1-202ENST00000368020 IFITM1P13164 125 aa9.9□□□□□ -0.82
USF1-202ENST00000368020 TRBV6-8A0A0A6YYG3 113 aa9.9□□□□□ -0.83
USF1-202ENST00000368020 A4D1N5 150 aa9.9□□□□□ -0.83
USF1-202ENST00000368020 MIAQ16674 131 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms