RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 A0A096LPF7 62 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 C8orf87E5RJ46 101 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 C7orf69Q9H7B7 122 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 TRIAP1O43715 76 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 IGLV2-14P01704 120 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 OXLD1Q5BKU9 147 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 TRBV7-4A0A0J9YYF1 115 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 Q1T7F1 81 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 LECT2O14960 151 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 C11orf72Q8NBR9 251 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 ETDCA0A1B0GVM5 59 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 IGHV4-31P0DP07 118 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 PLXNA3P51805 1871 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 TET1Q8NFU7 2136 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 IGKV2-29A2NJV5 120 aaPredicted RBP2.81□□□□□ -1.96
SYNE1-207ENST00000367255 ZNF73O43830 326 aaPredicted RBP2.81□□□□□ -1.96
SYNE1-207ENST00000367255 IGLV2-23P01705 113 aa2.81□□□□□ -1.96
SYNE1-207ENST00000367255 EDN2P20800 178 aa2.8□□□□□ -1.96
SYNE1-207ENST00000367255 KIAA1549Q9HCM3 1950 aa2.8□□□□□ -1.96
SYNE1-207ENST00000367255 NOTCH2NLQ7Z3S9 236 aa2.8□□□□□ -1.96
SYNE1-207ENST00000367255 LINC01547P58512 204 aaPredicted RBP2.8□□□□□ -1.96
SYNE1-207ENST00000367255 TANC2Q9HCD6 1990 aa2.8□□□□□ -1.96
SYNE1-207ENST00000367255 HAMPP81172 84 aa2.8□□□□□ -1.96
SYNE1-207ENST00000367255 PRO0461Q9UI25 63 aa2.8□□□□□ -1.96
SYNE1-207ENST00000367255 IGHV4-28A0A0C4DH34 117 aa2.8□□□□□ -1.96
SYNE1-207ENST00000367255 Q8N814 137 aa2.8□□□□□ -1.96
SYNE1-207ENST00000367255 NACAE9PAV3 2078 aa2.8□□□□□ -1.96
SYNE1-207ENST00000367255 Q6ZRU5 148 aa2.8□□□□□ -1.96
SYNE1-207ENST00000367255 GDF5OSQ5U4N7 250 aa2.8□□□□□ -1.96
SYNE1-207ENST00000367255 ADAMTSL4-AS1Q5T5F5 129 aa2.8□□□□□ -1.96
SYNE1-207ENST00000367255 KIAA1671Q9BY89 1806 aa2.8□□□□□ -1.96
SYNE1-207ENST00000367255 TLN2Q9Y4G6 2542 aa2.8□□□□□ -1.96
SYNE1-207ENST00000367255 NANOS2P60321 138 aaKnown RBP2.8□□□□□ -1.96
SYNE1-207ENST00000367255 E7EUB6 86 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 OBSCN-AS1Q96MR7 158 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 SCXQ7RTU7 201 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 ITLN2Q8WWU7 325 aaPredicted RBP2.79□□□□□ -1.96
SYNE1-207ENST00000367255 VWA8A3KMH1 1905 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 DOCK4Q8N1I0 1966 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 TSC2P49815 1807 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 RSPO1Q2MKA7 263 aaPredicted RBP2.79□□□□□ -1.96
SYNE1-207ENST00000367255 CTSZQ9UBR2 303 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 SLPIP03973 132 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 C4orf48Q5BLP8 95 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 XCL1P47992 114 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 ABCA12Q86UK0 2595 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 LY6G6DO95868 133 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 SUMO4Q6EEV6 95 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 CDIP1Q9H305 208 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 COL4A4P53420 1690 aaPredicted RBP2.79□□□□□ -1.96
SYNE1-207ENST00000367255 DCANP1Q8TF63 244 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 ANAPC1Q9H1A4 1944 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 ATP5J2P56134 94 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 MSRB2Q9Y3D2 182 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 RETNLBQ9BQ08 111 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 ADAMTSL1Q8N6G6 1762 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 DEFB113Q30KQ7 82 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 MAPKAPK5-AS1Q8N8E1 139 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 MOBPQ13875 183 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 Q6ZQT7 251 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 Q8TAT8 98 aa2.79□□□□□ -1.96
SYNE1-207ENST00000367255 TNP2Q05952 138 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 SIRPDQ9H106 197 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 TRBV6-8A0A0A6YYG3 113 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 C22orf34Q6ZV56 151 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 RETNQ9HD89 108 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 LRRK1Q38SD2 2015 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 LINC00322Q6ZN03 302 aaPredicted RBP2.78□□□□□ -1.96
SYNE1-207ENST00000367255 SPART-AS1P0CW21 52 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 PRYO14603 147 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 Q6ZTI0 123 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 B9D2Q9BPU9 175 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 GREB1Q4ZG55 1949 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 IGHV7-81A0A0B4J1V7 117 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 KTN1-AS1Q86SY8 53 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 THSD7BQ9C0I4 1608 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 XCL2Q9UBD3 114 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 PLA2G2AP14555 144 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 CDKN2A-AS1Q9UH64 79 aa2.78□□□□□ -1.96
SYNE1-207ENST00000367255 ZFAND2AQ8N6M9 145 aa2.78□□□□□ -1.97
SYNE1-207ENST00000367255 AVPP01185 164 aa2.77□□□□□ -1.97
SYNE1-207ENST00000367255 TNRC6AQ8NDV7 1962 aaKnown RBP2.77□□□□□ -1.97
SYNE1-207ENST00000367255 LINC00269Q8N2A0 174 aa2.77□□□□□ -1.97
SYNE1-207ENST00000367255 SORL1Q92673 2214 aa2.77□□□□□ -1.97
SYNE1-207ENST00000367255 COL4A1P02462 1669 aa2.77□□□□□ -1.97
SYNE1-207ENST00000367255 Q6ZVQ6 151 aa2.77□□□□□ -1.97
SYNE1-207ENST00000367255 LINC00482Q8N8I6 264 aa2.77□□□□□ -1.97
SYNE1-207ENST00000367255 WFDC9Q8NEX5 89 aa2.77□□□□□ -1.97
SYNE1-207ENST00000367255 DEFB123Q8N688 67 aa2.77□□□□□ -1.97
SYNE1-207ENST00000367255 PCDH15Q96QU1 1955 aa2.77□□□□□ -1.97
SYNE1-207ENST00000367255 Q8N6K4 173 aa2.77□□□□□ -1.97
SYNE1-207ENST00000367255 C17orf58Q2M2W7 97 aa2.77□□□□□ -1.97
SYNE1-207ENST00000367255 Q9BRP9 147 aa2.77□□□□□ -1.97
SYNE1-207ENST00000367255 A6NED7 52 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 NCR3O14931 201 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 IGKV1OR2-108A0A075B7D4 117 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 GAS8-AS1O95177 125 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 TNFRSF13BO14836 293 aaPredicted RBP2.76□□□□□ -1.97
SYNE1-207ENST00000367255 IGKV1D-37A0A075B6S9 117 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 LY6LH3BQJ8 138 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms